RNA–Protein interactions for RNA: ENST00000531297.1

SOX6-214, Transcript of SRY-box 6, humanhuman

TSL 3

Gene SOX6, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-214ENST00000531297 NKPD1Q17RQ9 610 aa6.53□□□□□ -1.36
SOX6-214ENST00000531297 PI16Q6UXB8 463 aa6.53□□□□□ -1.36
SOX6-214ENST00000531297 FAM214BQ7L5A3 538 aa6.53□□□□□ -1.36
SOX6-214ENST00000531297 C12orf40Q86WS4 652 aa6.53□□□□□ -1.36
SOX6-214ENST00000531297 STK35Q8TDR2 534 aa6.53□□□□□ -1.36
SOX6-214ENST00000531297 PRDM7Q9NQW5 492 aa6.53□□□□□ -1.36
SOX6-214ENST00000531297 CSADQ9Y600 493 aa6.53□□□□□ -1.36
SOX6-214ENST00000531297 TOPBP1Q92547 1522 aa6.53□□□□□ -1.36
SOX6-214ENST00000531297 CUX1P39880 1505 aa6.52□□□□□ -1.37
SOX6-214ENST00000531297 ZNF503-AS2A6NEH8 195 aa6.52□□□□□ -1.37
SOX6-214ENST00000531297 TREHO43280 583 aa6.52□□□□□ -1.37
SOX6-214ENST00000531297 GDNFP39905 211 aa6.52□□□□□ -1.37
SOX6-214ENST00000531297 RING1Q06587 406 aa6.52□□□□□ -1.37
SOX6-214ENST00000531297 ERICH6Q7L0X2 663 aa6.52□□□□□ -1.37
SOX6-214ENST00000531297 SIAH1Q8IUQ4 282 aa6.52□□□□□ -1.37
SOX6-214ENST00000531297 FBXO15Q8NCQ5 510 aaPredicted RBP6.52□□□□□ -1.37
SOX6-214ENST00000531297 CARS2Q9HA77 564 aaKnown RBP6.52□□□□□ -1.37
SOX6-214ENST00000531297 SOGA1O94964 1423 aa6.51□□□□□ -1.37
SOX6-214ENST00000531297 EEA1Q15075 1411 aa6.51□□□□□ -1.37
SOX6-214ENST00000531297 URB2Q14146 1524 aaKnown RBP6.51□□□□□ -1.37
SOX6-214ENST00000531297 BIVM-ERCC5R4GMW8 1640 aa6.51□□□□□ -1.37
SOX6-214ENST00000531297 PRAMEF27A3QJZ7 478 aa6.51□□□□□ -1.37
SOX6-214ENST00000531297 ENC1O14682 589 aa6.51□□□□□ -1.37
SOX6-214ENST00000531297 ZNF865P0CJ78 1059 aaPredicted RBP6.51□□□□□ -1.37
SOX6-214ENST00000531297 KIR3DL1P43629 444 aa6.51□□□□□ -1.37
SOX6-214ENST00000531297 SYDE1Q6ZW31 735 aaPredicted RBP6.51□□□□□ -1.37
SOX6-214ENST00000531297 C3orf58Q8NDZ4 430 aa6.51□□□□□ -1.37
SOX6-214ENST00000531297 FRMD6Q96NE9 622 aa6.51□□□□□ -1.37
SOX6-214ENST00000531297 SNCAIPQ9Y6H5 919 aa6.51□□□□□ -1.37
SOX6-214ENST00000531297 WDR62O43379 1518 aa6.5□□□□□ -1.37
SOX6-214ENST00000531297 FGD5Q6ZNL6 1462 aa6.5□□□□□ -1.37
SOX6-214ENST00000531297 IFT140Q96RY7 1462 aa6.5□□□□□ -1.37
SOX6-214ENST00000531297 EOMESO95936 686 aa6.5□□□□□ -1.37
SOX6-214ENST00000531297 TMEM253P0C7T8 217 aa6.5□□□□□ -1.37
SOX6-214ENST00000531297 BMP6P22004 513 aa6.5□□□□□ -1.37
SOX6-214ENST00000531297 NTF4P34130 210 aa6.5□□□□□ -1.37
SOX6-214ENST00000531297 CAP2P40123 477 aa6.5□□□□□ -1.37
SOX6-214ENST00000531297 ETF1P62495 437 aaKnown RBP6.5□□□□□ -1.37
SOX6-214ENST00000531297 DSC3Q14574 896 aa6.5□□□□□ -1.37
SOX6-214ENST00000531297 CDKAL1Q5VV42 579 aa6.5□□□□□ -1.37
SOX6-214ENST00000531297 LIN37Q96GY3 246 aaPredicted RBP6.5□□□□□ -1.37
SOX6-214ENST00000531297 HSPA12BQ96MM6 686 aa6.5□□□□□ -1.37
SOX6-214ENST00000531297 MIPEPQ99797 713 aa6.5□□□□□ -1.37
SOX6-214ENST00000531297 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.5□□□□□ -1.37
SOX6-214ENST00000531297 FAM8A1Q9UBU6 413 aa6.5□□□□□ -1.37
SOX6-214ENST00000531297 GNEQ9Y223 722 aaKnown RBP6.5□□□□□ -1.37
SOX6-214ENST00000531297 KIF27Q86VH2 1401 aa6.5□□□□□ -1.37
SOX6-214ENST00000531297 SYNJ1O43426 1573 aa6.49□□□□□ -1.37
SOX6-214ENST00000531297 CUX2O14529 1486 aa6.49□□□□□ -1.37
SOX6-214ENST00000531297 MAPK8P45983 427 aa6.49□□□□□ -1.37
SOX6-214ENST00000531297 FGD1P98174 961 aa6.49□□□□□ -1.37
SOX6-214ENST00000531297 PCNX4Q63HM2 1172 aa6.49□□□□□ -1.37
SOX6-214ENST00000531297 HID1Q8IV36 788 aa6.49□□□□□ -1.37
SOX6-214ENST00000531297 LRRC56Q8IYG6 542 aaPredicted RBP6.49□□□□□ -1.37
SOX6-214ENST00000531297 GRIN3AQ8TCU5 1115 aa6.49□□□□□ -1.37
SOX6-214ENST00000531297 SYTL4Q96C24 671 aaPredicted RBP6.49□□□□□ -1.37
SOX6-214ENST00000531297 ALPK1Q96QP1 1244 aa6.49□□□□□ -1.37
SOX6-214ENST00000531297 WNT10AQ9GZT5 417 aa6.49□□□□□ -1.37
SOX6-214ENST00000531297 POLA1P09884 1462 aaPredicted RBP6.48□□□□□ -1.37
SOX6-214ENST00000531297 SV2BQ7L1I2 683 aa6.48□□□□□ -1.37
SOX6-214ENST00000531297 TMPRSS7Q7RTY8 843 aa6.48□□□□□ -1.37
SOX6-214ENST00000531297 RETREG2Q8NC44 543 aa6.48□□□□□ -1.37
SOX6-214ENST00000531297 ATP13A1Q9HD20 1204 aa6.48□□□□□ -1.37
SOX6-214ENST00000531297 H3BS24 57 aa6.47□□□□□ -1.37
SOX6-214ENST00000531297 SLITRK5O94991 958 aa6.47□□□□□ -1.37
SOX6-214ENST00000531297 BRD1O95696 1058 aa6.47□□□□□ -1.37
SOX6-214ENST00000531297 ETV3P41162 512 aa6.47□□□□□ -1.37
SOX6-214ENST00000531297 LETMD1Q6P1Q0 360 aa6.47□□□□□ -1.37
SOX6-214ENST00000531297 PIWIL2Q8TC59 973 aaKnown RBP6.47□□□□□ -1.37
SOX6-214ENST00000531297 EPB41L4BQ9H329 900 aa6.47□□□□□ -1.37
SOX6-214ENST00000531297 NSUN3Q9H649 340 aaKnown RBP6.47□□□□□ -1.37
SOX6-214ENST00000531297 SEMA3GQ9NS98 782 aa6.47□□□□□ -1.37
SOX6-214ENST00000531297 TACC3Q9Y6A5 838 aa6.47□□□□□ -1.37
SOX6-214ENST00000531297 THOC2Q8NI27 1593 aaKnown RBP6.47□□□□□ -1.37
SOX6-214ENST00000531297 ABCA10Q8WWZ4 1543 aa6.46□□□□□ -1.37
SOX6-214ENST00000531297 TCAF2A6NFQ2 919 aa6.46□□□□□ -1.38
SOX6-214ENST00000531297 PAGE1O75459 146 aa6.46□□□□□ -1.38
SOX6-214ENST00000531297 ZSCAN22P10073 491 aaPredicted RBP6.46□□□□□ -1.38
SOX6-214ENST00000531297 PRR23BQ6ZRT6 265 aa6.46□□□□□ -1.38
SOX6-214ENST00000531297 ABHD4Q8TB40 342 aa6.46□□□□□ -1.38
SOX6-214ENST00000531297 TRIT1Q9H3H1 467 aaKnown RBP6.46□□□□□ -1.38
SOX6-214ENST00000531297 C12orf49Q9H741 205 aa6.46□□□□□ -1.38
SOX6-214ENST00000531297 DCP1AQ9NPI6 582 aaPredicted RBP6.46□□□□□ -1.38
SOX6-214ENST00000531297 RAPGEFL1Q9UHV5 662 aa6.46□□□□□ -1.38
SOX6-214ENST00000531297 TTF2Q9UNY4 1162 aaKnown RBP6.46□□□□□ -1.38
SOX6-214ENST00000531297 CAPN6Q9Y6Q1 641 aa6.46□□□□□ -1.38
SOX6-214ENST00000531297 FBXO24O75426 580 aa6.45□□□□□ -1.38
SOX6-214ENST00000531297 CFPP27918 469 aa6.45□□□□□ -1.38
SOX6-214ENST00000531297 PDE4BQ07343 736 aa6.45□□□□□ -1.38
SOX6-214ENST00000531297 FYB2Q5VWT5 728 aa6.45□□□□□ -1.38
SOX6-214ENST00000531297 CIAPIN1Q6FI81 312 aa6.45□□□□□ -1.38
SOX6-214ENST00000531297 LRFN4Q6PJG9 635 aa6.45□□□□□ -1.38
SOX6-214ENST00000531297 MPRIPQ6WCQ1 1025 aa6.45□□□□□ -1.38
SOX6-214ENST00000531297 FAM9AQ8IZU1 332 aaPredicted RBP6.45□□□□□ -1.38
SOX6-214ENST00000531297 PLPPR2Q96GM1 343 aa6.45□□□□□ -1.38
SOX6-214ENST00000531297 SLC26A8Q96RN1 970 aa6.45□□□□□ -1.38
SOX6-214ENST00000531297 DIRC2Q96SL1 478 aa6.45□□□□□ -1.38
SOX6-214ENST00000531297 KRTAP4-9Q9BYQ8 210 aa6.45□□□□□ -1.38
SOX6-214ENST00000531297 WDR97A6NE52 1622 aa6.45□□□□□ -1.38
SOX6-214ENST00000531297 CBX7O95931 251 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms