RNA–Protein interactions for RNA: ENST00000531196.5

FGFR1-236, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 3

Gene FGFR1, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-236ENST00000531196 ATAD5Q96QE3 1844 aa13.24□□□□□ -0.29
FGFR1-236ENST00000531196 SIPA1L1O43166 1804 aa13.23□□□□□ -0.29
FGFR1-236ENST00000531196 LOC285556D6RIA3 1793 aa13.23□□□□□ -0.29
FGFR1-236ENST00000531196 ADCY3O60266 1144 aa13.23□□□□□ -0.29
FGFR1-236ENST00000531196 PDE6AP16499 860 aa13.23□□□□□ -0.29
FGFR1-236ENST00000531196 FLT3LGP49771 235 aa13.23□□□□□ -0.29
FGFR1-236ENST00000531196 BACE1P56817 501 aa13.23□□□□□ -0.29
FGFR1-236ENST00000531196 MTFR1Q15390 333 aa13.23□□□□□ -0.29
FGFR1-236ENST00000531196 SH3D19Q5HYK7 790 aa13.23□□□□□ -0.29
FGFR1-236ENST00000531196 NKX2-3Q8TAU0 364 aa13.23□□□□□ -0.29
FGFR1-236ENST00000531196 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.23□□□□□ -0.29
FGFR1-236ENST00000531196 CRNKL1Q9BZJ0 848 aaKnown RBP13.23□□□□□ -0.29
FGFR1-236ENST00000531196 ASCC2Q9H1I8 757 aaPredicted RBP13.23□□□□□ -0.29
FGFR1-236ENST00000531196 SERPINB13Q9UIV8 391 aa13.23□□□□□ -0.29
FGFR1-236ENST00000531196 GABRQQ9UN88 632 aa13.23□□□□□ -0.29
FGFR1-236ENST00000531196 MYO5AQ9Y4I1 1855 aaKnown RBP13.23□□□□□ -0.29
FGFR1-236ENST00000531196 FOCADQ5VW36 1801 aa13.23□□□□□ -0.29
FGFR1-236ENST00000531196 C19orf81C9J6K1 198 aa13.22□□□□□ -0.29
FGFR1-236ENST00000531196 USP17L10C9JJH3 530 aa13.22□□□□□ -0.29
FGFR1-236ENST00000531196 GH2P01242 217 aa13.22□□□□□ -0.29
FGFR1-236ENST00000531196 POLR3DP05423 398 aaPredicted RBP13.22□□□□□ -0.29
FGFR1-236ENST00000531196 CCL5P13501 91 aa13.22□□□□□ -0.29
FGFR1-236ENST00000531196 PDE3AQ14432 1141 aa13.22□□□□□ -0.29
FGFR1-236ENST00000531196 METTL16Q86W50 562 aaKnown RBP13.22□□□□□ -0.29
FGFR1-236ENST00000531196 SIRT2Q8IXJ6 389 aa13.22□□□□□ -0.29
FGFR1-236ENST00000531196 RNF208Q9H0X6 261 aa13.22□□□□□ -0.29
FGFR1-236ENST00000531196 EHD4Q9H223 541 aa13.22□□□□□ -0.29
FGFR1-236ENST00000531196 CEP290O15078 2479 aa13.22□□□□□ -0.29
FGFR1-236ENST00000531196 CDK5RAP2Q96SN8 1893 aa13.21□□□□□ -0.29
FGFR1-236ENST00000531196 ZNF532Q9HCE3 1301 aa13.21□□□□□ -0.29
FGFR1-236ENST00000531196 ELNP15502 786 aa13.21□□□□□ -0.29
FGFR1-236ENST00000531196 JAG1P78504 1218 aa13.21□□□□□ -0.29
FGFR1-236ENST00000531196 RAB3GAP1Q15042 981 aa13.21□□□□□ -0.29
FGFR1-236ENST00000531196 ZYXQ15942 572 aaKnown RBP13.21□□□□□ -0.29
FGFR1-236ENST00000531196 SHROOM1Q2M3G4 852 aaPredicted RBP13.21□□□□□ -0.29
FGFR1-236ENST00000531196 RIOK1Q9BRS2 568 aaKnown RBP13.21□□□□□ -0.29
FGFR1-236ENST00000531196 LRRCC1Q9C099 1032 aa13.21□□□□□ -0.29
FGFR1-236ENST00000531196 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.21□□□□□ -0.29
FGFR1-236ENST00000531196 BOLA2Q9H3K6 86 aa13.21□□□□□ -0.29
FGFR1-236ENST00000531196 CABP5Q9NP86 173 aa13.21□□□□□ -0.29
FGFR1-236ENST00000531196 PAG1Q9NWQ8 432 aa13.21□□□□□ -0.29
FGFR1-236ENST00000531196 MCM9Q9NXL9 1143 aa13.21□□□□□ -0.29
FGFR1-236ENST00000531196 SLC34A2O95436 690 aa13.2□□□□□ -0.3
FGFR1-236ENST00000531196 INHAP05111 366 aa13.2□□□□□ -0.3
FGFR1-236ENST00000531196 IRF5Q13568 498 aa13.2□□□□□ -0.3
FGFR1-236ENST00000531196 ABCB5Q2M3G0 1257 aa13.2□□□□□ -0.3
FGFR1-236ENST00000531196 CERKLQ49MI3 558 aaPredicted RBP13.2□□□□□ -0.3
FGFR1-236ENST00000531196 C20orf194Q5TEA3 1177 aa13.2□□□□□ -0.3
FGFR1-236ENST00000531196 CCAR1Q8IX12 1150 aaKnown RBP13.2□□□□□ -0.3
FGFR1-236ENST00000531196 GCC1Q96CN9 775 aa13.2□□□□□ -0.3
FGFR1-236ENST00000531196 EDC3Q96F86 508 aaKnown RBP13.2□□□□□ -0.3
FGFR1-236ENST00000531196 CWC22Q9HCG8 908 aaKnown RBP13.2□□□□□ -0.3
FGFR1-236ENST00000531196 MYH1P12882 1939 aa13.19□□□□□ -0.3
FGFR1-236ENST00000531196 MGAMO43451 1857 aa13.19□□□□□ -0.3
FGFR1-236ENST00000531196 MPHOSPH10O00566 681 aaKnown RBP13.19□□□□□ -0.3
FGFR1-236ENST00000531196 GJB1P08034 283 aa13.19□□□□□ -0.3
FGFR1-236ENST00000531196 TATDN1Q6P1N9 297 aa13.19□□□□□ -0.3
FGFR1-236ENST00000531196 USP17L2Q6R6M4 530 aa13.19□□□□□ -0.3
FGFR1-236ENST00000531196 LCORLQ8N3X6 602 aa13.19□□□□□ -0.3
FGFR1-236ENST00000531196 PXYLP1Q8TE99 480 aa13.19□□□□□ -0.3
FGFR1-236ENST00000531196 DDRGK1Q96HY6 314 aa13.19□□□□□ -0.3
FGFR1-236ENST00000531196 PAGR1Q9BTK6 254 aa13.19□□□□□ -0.3
FGFR1-236ENST00000531196 UNC93B1Q9H1C4 597 aa13.19□□□□□ -0.3
FGFR1-236ENST00000531196 NAV1Q8NEY1 1877 aa13.19□□□□□ -0.3
FGFR1-236ENST00000531196 MBD4O95243 580 aa13.18□□□□□ -0.3
FGFR1-236ENST00000531196 ATP5JP18859 108 aa13.18□□□□□ -0.3
FGFR1-236ENST00000531196 HOXA7P31268 230 aaPredicted RBP13.18□□□□□ -0.3
FGFR1-236ENST00000531196 GJA8P48165 433 aa13.18□□□□□ -0.3
FGFR1-236ENST00000531196 HERVK_113P62684 666 aa13.18□□□□□ -0.3
FGFR1-236ENST00000531196 AMOTL1Q8IY63 956 aa13.18□□□□□ -0.3
FGFR1-236ENST00000531196 GPRC5AQ8NFJ5 357 aa13.18□□□□□ -0.3
FGFR1-236ENST00000531196 U2AF1L4Q8WU68 220 aaKnown RBP13.18□□□□□ -0.3
FGFR1-236ENST00000531196 GTF3C2Q8WUA4 911 aaPredicted RBP13.18□□□□□ -0.3
FGFR1-236ENST00000531196 SDR42E1Q8WUS8 393 aa13.18□□□□□ -0.3
FGFR1-236ENST00000531196 SHISA4Q96DD7 197 aa13.18□□□□□ -0.3
FGFR1-236ENST00000531196 P2RX7Q99572 595 aaKnown RBP13.18□□□□□ -0.3
FGFR1-236ENST00000531196 ARMT1Q9H993 441 aa13.18□□□□□ -0.3
FGFR1-236ENST00000531196 MORF4L1Q9UBU8 362 aa13.18□□□□□ -0.3
FGFR1-236ENST00000531196 SMARCA5O60264 1052 aaPredicted RBP13.17□□□□□ -0.3
FGFR1-236ENST00000531196 PLCD1P51178 756 aa13.17□□□□□ -0.3
FGFR1-236ENST00000531196 USP14P54578 494 aa13.17□□□□□ -0.3
FGFR1-236ENST00000531196 ZSCAN25Q6NSZ9 544 aa13.17□□□□□ -0.3
FGFR1-236ENST00000531196 GPATCH3Q96I76 525 aa13.17□□□□□ -0.3
FGFR1-236ENST00000531196 HAUS7Q99871 368 aa13.17□□□□□ -0.3
FGFR1-236ENST00000531196 EMILIN3Q9NT22 766 aa13.17□□□□□ -0.3
FGFR1-236ENST00000531196 TCRBV5S4A2TA0A5A2 114 aa13.16□□□□□ -0.3
FGFR1-236ENST00000531196 FARP2O94887 1054 aaPredicted RBP13.16□□□□□ -0.3
FGFR1-236ENST00000531196 HMGCRP04035 888 aa13.16□□□□□ -0.3
FGFR1-236ENST00000531196 SHMT1P34896 483 aa13.16□□□□□ -0.3
FGFR1-236ENST00000531196 ADD2P35612 726 aa13.16□□□□□ -0.3
FGFR1-236ENST00000531196 SOCS4Q8WXH5 440 aa13.16□□□□□ -0.3
FGFR1-236ENST00000531196 DPF3Q92784 378 aa13.16□□□□□ -0.3
FGFR1-236ENST00000531196 DEFB118Q96PH6 123 aa13.16□□□□□ -0.3
FGFR1-236ENST00000531196 HTATIP2Q9BUP3 242 aa13.16□□□□□ -0.3
FGFR1-236ENST00000531196 DCP1AQ9NPI6 582 aaPredicted RBP13.16□□□□□ -0.3
FGFR1-236ENST00000531196 DDX60LQ5H9U9 1706 aaKnown RBP13.16□□□□□ -0.3
FGFR1-236ENST00000531196 USP17L15C9J2P7 530 aa13.15□□□□□ -0.3
FGFR1-236ENST00000531196 USP17L13C9JLJ4 530 aa13.15□□□□□ -0.3
FGFR1-236ENST00000531196 USP17L11C9JVI0 530 aa13.15□□□□□ -0.3
FGFR1-236ENST00000531196 USP17L18D6R9N7 530 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms