RNA–Protein interactions for RNA: ENST00000530903.1

RPUSD4-205, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-205ENST00000530903 TSGA10IPQ3SY00 556 aa11.85□□□□□ -0.51
RPUSD4-205ENST00000530903 SBK1Q52WX2 424 aa11.85□□□□□ -0.51
RPUSD4-205ENST00000530903 ZFPM1Q8IX07 1006 aa11.85□□□□□ -0.51
RPUSD4-205ENST00000530903 AMOTL1Q8IY63 956 aa11.85□□□□□ -0.51
RPUSD4-205ENST00000530903 IDI2Q9BXS1 227 aa11.85□□□□□ -0.51
RPUSD4-205ENST00000530903 UPF3BQ9BZI7 483 aaKnown RBP11.85□□□□□ -0.51
RPUSD4-205ENST00000530903 OSBPL5Q9H0X9 879 aaPredicted RBP11.85□□□□□ -0.51
RPUSD4-205ENST00000530903 INCENPQ9NQS7 918 aa11.85□□□□□ -0.51
RPUSD4-205ENST00000530903 FAM198AQ9UFP1 575 aa11.85□□□□□ -0.51
RPUSD4-205ENST00000530903 TACC3Q9Y6A5 838 aa11.85□□□□□ -0.51
RPUSD4-205ENST00000530903 NEDD4P46934 1319 aa11.84□□□□□ -0.51
RPUSD4-205ENST00000530903 GLTPD2A6NH11 291 aa11.84□□□□□ -0.51
RPUSD4-205ENST00000530903 ARHGAP33O14559 1287 aa11.84□□□□□ -0.51
RPUSD4-205ENST00000530903 ANP32AP39687 249 aaKnown RBP11.84□□□□□ -0.51
RPUSD4-205ENST00000530903 PLCD1P51178 756 aa11.84□□□□□ -0.51
RPUSD4-205ENST00000530903 C12orf60Q5U649 245 aa11.84□□□□□ -0.51
RPUSD4-205ENST00000530903 IL17RAQ96F46 866 aa11.84□□□□□ -0.51
RPUSD4-205ENST00000530903 IPO9Q96P70 1041 aaKnown RBP11.84□□□□□ -0.51
RPUSD4-205ENST00000530903 NEK1Q96PY6 1258 aa11.84□□□□□ -0.51
RPUSD4-205ENST00000530903 ANAPC4Q9UJX5 808 aa11.84□□□□□ -0.51
RPUSD4-205ENST00000530903 SIPA1L1O43166 1804 aa11.83□□□□□ -0.52
RPUSD4-205ENST00000530903 MYH8P13535 1937 aa11.83□□□□□ -0.52
RPUSD4-205ENST00000530903 PSMA5P28066 241 aa11.83□□□□□ -0.52
RPUSD4-205ENST00000530903 NEK4P51957 841 aa11.83□□□□□ -0.52
RPUSD4-205ENST00000530903 RRP12Q5JTH9 1297 aaKnown RBP11.83□□□□□ -0.52
RPUSD4-205ENST00000530903 AKNAD1Q5T1N1 836 aa11.83□□□□□ -0.52
RPUSD4-205ENST00000530903 BLOC1S2Q6QNY1 142 aa11.83□□□□□ -0.52
RPUSD4-205ENST00000530903 ZSCAN29Q8IWY8 852 aaPredicted RBP11.83□□□□□ -0.52
RPUSD4-205ENST00000530903 PTCD2Q8WV60 388 aaKnown RBP11.83□□□□□ -0.52
RPUSD4-205ENST00000530903 DYNLL2Q96FJ2 89 aa11.83□□□□□ -0.52
RPUSD4-205ENST00000530903 TOMM22Q9NS69 142 aa11.83□□□□□ -0.52
RPUSD4-205ENST00000530903 HCSTQ9UBK5 93 aa11.83□□□□□ -0.52
RPUSD4-205ENST00000530903 SCAF8Q9UPN6 1271 aaKnown RBP11.83□□□□□ -0.52
RPUSD4-205ENST00000530903 CNTNAP1P78357 1384 aa11.82□□□□□ -0.52
RPUSD4-205ENST00000530903 SCN4AP35499 1836 aa11.82□□□□□ -0.52
RPUSD4-205ENST00000530903 DDTLA6NHG4 134 aaPredicted RBP11.82□□□□□ -0.52
RPUSD4-205ENST00000530903 B4E1Z4 1266 aa11.82□□□□□ -0.52
RPUSD4-205ENST00000530903 ENTPD3O75355 529 aa11.82□□□□□ -0.52
RPUSD4-205ENST00000530903 PRDM1O75626 825 aa11.82□□□□□ -0.52
RPUSD4-205ENST00000530903 PPP1R37O75864 691 aa11.82□□□□□ -0.52
RPUSD4-205ENST00000530903 HIRAP54198 1017 aaPredicted RBP11.82□□□□□ -0.52
RPUSD4-205ENST00000530903 TRDNQ13061 729 aa11.82□□□□□ -0.52
RPUSD4-205ENST00000530903 ADGRD1Q6QNK2 874 aa11.82□□□□□ -0.52
RPUSD4-205ENST00000530903 MFSD6Q6ZSS7 791 aa11.82□□□□□ -0.52
RPUSD4-205ENST00000530903 RUFY3Q7L099 469 aa11.82□□□□□ -0.52
RPUSD4-205ENST00000530903 RALYLQ86SE5 291 aaKnown RBP11.82□□□□□ -0.52
RPUSD4-205ENST00000530903 NKX2-3Q8TAU0 364 aa11.82□□□□□ -0.52
RPUSD4-205ENST00000530903 STAG1Q8WVM7 1258 aa11.82□□□□□ -0.52
RPUSD4-205ENST00000530903 TCEANC2Q96MN5 208 aa11.82□□□□□ -0.52
RPUSD4-205ENST00000530903 TM6SF1Q9BZW5 370 aa11.82□□□□□ -0.52
RPUSD4-205ENST00000530903 ADARB2Q9NS39 739 aaKnown RBP11.82□□□□□ -0.52
RPUSD4-205ENST00000530903 HACL1Q9UJ83 578 aa11.82□□□□□ -0.52
RPUSD4-205ENST00000530903 CYP46A1Q9Y6A2 500 aa11.82□□□□□ -0.52
RPUSD4-205ENST00000530903 WDR90Q96KV7 1748 aa11.82□□□□□ -0.52
RPUSD4-205ENST00000530903 ROBO3Q96MS0 1386 aa11.81□□□□□ -0.52
RPUSD4-205ENST00000530903 TK2O00142 265 aa11.81□□□□□ -0.52
RPUSD4-205ENST00000530903 HLA-DOAP06340 250 aa11.81□□□□□ -0.52
RPUSD4-205ENST00000530903 SLC3A2P08195 630 aaKnown RBP11.81□□□□□ -0.52
RPUSD4-205ENST00000530903 RPS6KB1P23443 525 aa11.81□□□□□ -0.52
RPUSD4-205ENST00000530903 SH3BP5LQ7L8J4 393 aa11.81□□□□□ -0.52
RPUSD4-205ENST00000530903 CHST3Q7LGC8 479 aa11.81□□□□□ -0.52
RPUSD4-205ENST00000530903 TTC6Q86TZ1 520 aa11.81□□□□□ -0.52
RPUSD4-205ENST00000530903 SLC44A5Q8NCS7 719 aa11.81□□□□□ -0.52
RPUSD4-205ENST00000530903 NCOA7Q8NI08 942 aa11.81□□□□□ -0.52
RPUSD4-205ENST00000530903 RNF41Q9H4P4 317 aaPredicted RBP11.81□□□□□ -0.52
RPUSD4-205ENST00000530903 POLR2AP24928 1970 aaKnown RBP11.81□□□□□ -0.52
RPUSD4-205ENST00000530903 COL2A1P02458 1487 aaPredicted RBP11.8□□□□□ -0.52
RPUSD4-205ENST00000530903 CD2BP2O95400 341 aaKnown RBP11.8□□□□□ -0.52
RPUSD4-205ENST00000530903 SLURP2P0DP57 97 aa11.8□□□□□ -0.52
RPUSD4-205ENST00000530903 PDE4BQ07343 736 aa11.8□□□□□ -0.52
RPUSD4-205ENST00000530903 ANGEL2Q5VTE6 544 aaKnown RBP11.8□□□□□ -0.52
RPUSD4-205ENST00000530903 FKBP1CQ5VVH2 108 aa11.8□□□□□ -0.52
RPUSD4-205ENST00000530903 NOL8Q76FK4 1167 aaKnown RBP11.8□□□□□ -0.52
RPUSD4-205ENST00000530903 CYB5R4Q7L1T6 521 aa11.8□□□□□ -0.52
RPUSD4-205ENST00000530903 MB21D2Q8IYB1 491 aaPredicted RBP11.8□□□□□ -0.52
RPUSD4-205ENST00000530903 FAM151AQ8WW52 585 aa11.8□□□□□ -0.52
RPUSD4-205ENST00000530903 LRRC2Q9BYS8 371 aa11.8□□□□□ -0.52
RPUSD4-205ENST00000530903 KRT23Q9C075 422 aa11.8□□□□□ -0.52
RPUSD4-205ENST00000530903 TMEM39BQ9GZU3 492 aa11.8□□□□□ -0.52
RPUSD4-205ENST00000530903 CNNM2Q9H8M5 875 aa11.8□□□□□ -0.52
RPUSD4-205ENST00000530903 PDRG1Q9NUG6 133 aa11.8□□□□□ -0.52
RPUSD4-205ENST00000530903 GGA3Q9NZ52 723 aa11.8□□□□□ -0.52
RPUSD4-205ENST00000530903 ATRNL1Q5VV63 1379 aa11.8□□□□□ -0.52
RPUSD4-205ENST00000530903 FAM196BA6NMK8 535 aa11.79□□□□□ -0.52
RPUSD4-205ENST00000530903 RANBP6O60518 1105 aaKnown RBP11.79□□□□□ -0.52
RPUSD4-205ENST00000530903 KDM4AO75164 1064 aa11.79□□□□□ -0.52
RPUSD4-205ENST00000530903 HMGB1P09429 215 aaKnown RBP11.79□□□□□ -0.52
RPUSD4-205ENST00000530903 EPHX2P34913 555 aa11.79□□□□□ -0.52
RPUSD4-205ENST00000530903 TNNI2P48788 182 aa11.79□□□□□ -0.52
RPUSD4-205ENST00000530903 C16orf86Q6ZW13 317 aa11.79□□□□□ -0.52
RPUSD4-205ENST00000530903 DHX32Q7L7V1 743 aaKnown RBP11.79□□□□□ -0.52
RPUSD4-205ENST00000530903 FAM83AQ86UY5 434 aa11.79□□□□□ -0.52
RPUSD4-205ENST00000530903 TTC14Q96N46 770 aa11.79□□□□□ -0.52
RPUSD4-205ENST00000530903 CSRNP1Q96S65 589 aa11.79□□□□□ -0.52
RPUSD4-205ENST00000530903 DHX36Q9H2U1 1008 aaKnown RBP11.79□□□□□ -0.52
RPUSD4-205ENST00000530903 MKNK2Q9HBH9 465 aa11.79□□□□□ -0.52
RPUSD4-205ENST00000530903 SERPINB13Q9UIV8 391 aa11.79□□□□□ -0.52
RPUSD4-205ENST00000530903 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.79□□□□□ -0.52
RPUSD4-205ENST00000530903 PRC1O43663 620 aa11.78□□□□□ -0.52
RPUSD4-205ENST00000530903 ORC4O43929 436 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms