RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 LONRF3Q496Y0 759 aa19.77■□□□□ 0.76
BRCA2-204ENST00000530893 GLIPR1L2Q4G1C9 344 aa19.77■□□□□ 0.76
BRCA2-204ENST00000530893 METTL16Q86W50 562 aaKnown RBP19.77■□□□□ 0.76
BRCA2-204ENST00000530893 C16orf45Q96MC5 204 aaPredicted RBP19.77■□□□□ 0.76
BRCA2-204ENST00000530893 ATP8A2Q9NTI2 1148 aa19.77■□□□□ 0.76
BRCA2-204ENST00000530893 IFNKQ9P0W0 207 aa19.77■□□□□ 0.76
BRCA2-204ENST00000530893 SRPRBQ9Y5M8 271 aaKnown RBP19.77■□□□□ 0.76
BRCA2-204ENST00000530893 RIOK3O14730 519 aaKnown RBP19.76■□□□□ 0.75
BRCA2-204ENST00000530893 SMC2O95347 1197 aa19.76■□□□□ 0.75
BRCA2-204ENST00000530893 TNNT1P13805 278 aa19.76■□□□□ 0.75
BRCA2-204ENST00000530893 HIBADHP31937 336 aaKnown RBP19.76■□□□□ 0.75
BRCA2-204ENST00000530893 KCNJ6P48051 423 aa19.76■□□□□ 0.75
BRCA2-204ENST00000530893 DYNLL1P63167 89 aaKnown RBP19.76■□□□□ 0.75
BRCA2-204ENST00000530893 KANK3Q6NY19 840 aa19.76■□□□□ 0.75
BRCA2-204ENST00000530893 CTR9Q6PD62 1173 aa19.76■□□□□ 0.75
BRCA2-204ENST00000530893 TPTE2Q6XPS3 522 aa19.76■□□□□ 0.75
BRCA2-204ENST00000530893 BICDL1Q6ZP65 573 aa19.76■□□□□ 0.75
BRCA2-204ENST00000530893 NBPF5PQ86XG9 351 aaPredicted RBP19.76■□□□□ 0.75
BRCA2-204ENST00000530893 ZNF384Q8TF68 577 aa19.76■□□□□ 0.75
BRCA2-204ENST00000530893 CRNKL1Q9BZJ0 848 aaKnown RBP19.76■□□□□ 0.75
BRCA2-204ENST00000530893 LAMB1P07942 1786 aa19.76■□□□□ 0.75
BRCA2-204ENST00000530893 CBFA2T2O43439 604 aa19.76■□□□□ 0.75
BRCA2-204ENST00000530893 NRDCO43847 1150 aa19.76■□□□□ 0.75
BRCA2-204ENST00000530893 ZPR1O75312 459 aa19.76■□□□□ 0.75
BRCA2-204ENST00000530893 BMP15O95972 392 aa19.76■□□□□ 0.75
BRCA2-204ENST00000530893 PNOCQ13519 176 aa19.76■□□□□ 0.75
BRCA2-204ENST00000530893 CCDC82Q8N4S0 544 aa19.76■□□□□ 0.75
BRCA2-204ENST00000530893 TAOK2Q9UL54 1235 aa19.76■□□□□ 0.75
BRCA2-204ENST00000530893 CCDC88AQ3V6T2 1871 aa19.75■□□□□ 0.75
BRCA2-204ENST00000530893 CTIFO43310 598 aaKnown RBP19.75■□□□□ 0.75
BRCA2-204ENST00000530893 TOM1O60784 492 aa19.75■□□□□ 0.75
BRCA2-204ENST00000530893 MDM2Q00987 491 aaPredicted RBP19.75■□□□□ 0.75
BRCA2-204ENST00000530893 FUT2Q10981 343 aa19.75■□□□□ 0.75
BRCA2-204ENST00000530893 NT5DC1Q5TFE4 455 aa19.75■□□□□ 0.75
BRCA2-204ENST00000530893 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.75■□□□□ 0.75
BRCA2-204ENST00000530893 KIAA1551Q9HCM1 1747 aa19.75■□□□□ 0.75
BRCA2-204ENST00000530893 WTIPA6NIX2 430 aaPredicted RBP19.75■□□□□ 0.75
BRCA2-204ENST00000530893 MECOMQ03112 1051 aa19.75■□□□□ 0.75
BRCA2-204ENST00000530893 TROAPQ12815 778 aa19.75■□□□□ 0.75
BRCA2-204ENST00000530893 NR5A1Q13285 461 aa19.75■□□□□ 0.75
BRCA2-204ENST00000530893 ARID5BQ14865 1188 aa19.75■□□□□ 0.75
BRCA2-204ENST00000530893 CMTR1Q8N1G2 835 aaKnown RBP19.75■□□□□ 0.75
BRCA2-204ENST00000530893 TRIML1Q8N9V2 468 aa19.75■□□□□ 0.75
BRCA2-204ENST00000530893 CCDC34Q96HJ3 373 aa19.75■□□□□ 0.75
BRCA2-204ENST00000530893 PHF20Q9BVI0 1012 aa19.75■□□□□ 0.75
BRCA2-204ENST00000530893 ARPP21Q9UBL0 812 aaPredicted RBP19.75■□□□□ 0.75
BRCA2-204ENST00000530893 PCDHA5Q9Y5H7 936 aa19.75■□□□□ 0.75
BRCA2-204ENST00000530893 KRT2P35908 639 aa19.74■□□□□ 0.75
BRCA2-204ENST00000530893 FANCCQ00597 558 aa19.74■□□□□ 0.75
BRCA2-204ENST00000530893 PKN1Q16512 942 aa19.74■□□□□ 0.75
BRCA2-204ENST00000530893 SBK1Q52WX2 424 aa19.74■□□□□ 0.75
BRCA2-204ENST00000530893 HSD3B7Q9H2F3 369 aa19.74■□□□□ 0.75
BRCA2-204ENST00000530893 BRMS1Q9HCU9 246 aa19.74■□□□□ 0.75
BRCA2-204ENST00000530893 DACH1Q9UI36 760 aa19.74■□□□□ 0.75
BRCA2-204ENST00000530893 PCDHB6Q9Y5E3 794 aa19.74■□□□□ 0.75
BRCA2-204ENST00000530893 BTAF1O14981 1849 aa19.73■□□□□ 0.75
BRCA2-204ENST00000530893 USP17L12C9JPN9 530 aa19.73■□□□□ 0.75
BRCA2-204ENST00000530893 USP17L21D6R901 530 aa19.73■□□□□ 0.75
BRCA2-204ENST00000530893 KIF2AO00139 706 aaPredicted RBP19.73■□□□□ 0.75
BRCA2-204ENST00000530893 POSTNQ15063 836 aa19.73■□□□□ 0.75
BRCA2-204ENST00000530893 SPTY2D1Q68D10 685 aaPredicted RBP19.73■□□□□ 0.75
BRCA2-204ENST00000530893 NHSQ6T4R5 1651 aa19.73■□□□□ 0.75
BRCA2-204ENST00000530893 SFPQP23246 707 aaKnown RBP eCLIP19.73■□□□□ 0.75
BRCA2-204ENST00000530893 SYCP1Q15431 976 aa19.73■□□□□ 0.75
BRCA2-204ENST00000530893 NYAP1Q6ZVC0 841 aa19.73■□□□□ 0.75
BRCA2-204ENST00000530893 CABP5Q9NP86 173 aa19.73■□□□□ 0.75
BRCA2-204ENST00000530893 DCP1AQ9NPI6 582 aaPredicted RBP19.73■□□□□ 0.75
BRCA2-204ENST00000530893 TRIM75PA6NK02 468 aa19.72■□□□□ 0.75
BRCA2-204ENST00000530893 LMOD1P29536 600 aaPredicted RBP19.72■□□□□ 0.75
BRCA2-204ENST00000530893 PTPN14Q15678 1187 aa19.72■□□□□ 0.75
BRCA2-204ENST00000530893 TMC6Q7Z403 805 aa19.72■□□□□ 0.75
BRCA2-204ENST00000530893 FOXP4Q8IVH2 680 aaPredicted RBP19.72■□□□□ 0.75
BRCA2-204ENST00000530893 OXER1Q8TDS5 423 aa19.72■□□□□ 0.75
BRCA2-204ENST00000530893 AATFQ9NY61 560 aaKnown RBP eCLIP19.72■□□□□ 0.75
BRCA2-204ENST00000530893 RTCBQ9Y3I0 505 aaKnown RBP19.72■□□□□ 0.75
BRCA2-204ENST00000530893 SARSP49591 514 aaKnown RBP19.71■□□□□ 0.75
BRCA2-204ENST00000530893 CEP135Q66GS9 1140 aa19.71■□□□□ 0.75
BRCA2-204ENST00000530893 TMTC3Q6ZXV5 915 aa19.71■□□□□ 0.75
BRCA2-204ENST00000530893 CCAR2Q8N163 923 aaKnown RBP19.71■□□□□ 0.75
BRCA2-204ENST00000530893 MLKLQ8NB16 471 aa19.71■□□□□ 0.75
BRCA2-204ENST00000530893 CYP2D7A0A087X1C5 515 aa19.71■□□□□ 0.75
BRCA2-204ENST00000530893 GNPATO15228 680 aa19.71■□□□□ 0.75
BRCA2-204ENST00000530893 POLR2DO15514 142 aaKnown RBP19.71■□□□□ 0.75
BRCA2-204ENST00000530893 PDE4BQ07343 736 aa19.71■□□□□ 0.75
BRCA2-204ENST00000530893 CT47A1Q5JQC4 288 aaPredicted RBP19.71■□□□□ 0.75
BRCA2-204ENST00000530893 ISM2Q6H9L7 571 aa19.71■□□□□ 0.75
BRCA2-204ENST00000530893 CTCFLQ8NI51 663 aaPredicted RBP19.71■□□□□ 0.75
BRCA2-204ENST00000530893 FERMT2Q96AC1 680 aa19.71■□□□□ 0.75
BRCA2-204ENST00000530893 NGLY1Q96IV0 654 aa19.71■□□□□ 0.75
BRCA2-204ENST00000530893 TUBB4AP04350 444 aa19.7■□□□□ 0.74
BRCA2-204ENST00000530893 KLRK1P26718 216 aa19.7■□□□□ 0.74
BRCA2-204ENST00000530893 UBASH3AP57075 661 aa19.7■□□□□ 0.74
BRCA2-204ENST00000530893 SMARCE1Q969G3 411 aa19.7■□□□□ 0.74
BRCA2-204ENST00000530893 VPS54Q9P1Q0 977 aa19.7■□□□□ 0.74
BRCA2-204ENST00000530893 SRP68Q9UHB9 627 aaKnown RBP19.7■□□□□ 0.74
BRCA2-204ENST00000530893 V9GY48 417 aaPredicted RBP19.7■□□□□ 0.74
BRCA2-204ENST00000530893 PSDA5PKW4 1024 aaPredicted RBP19.69■□□□□ 0.74
BRCA2-204ENST00000530893 SERPINC1P01008 464 aa19.69■□□□□ 0.74
BRCA2-204ENST00000530893 KCNQ4P56696 695 aa19.69■□□□□ 0.74
BRCA2-204ENST00000530893 CCDC112Q8NEF3 446 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms