RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 TRIM34Q9BYJ4 488 aa13.28□□□□□ -0.28
USP35-207ENST00000530546 GRAPQ13588 217 aa13.27□□□□□ -0.28
USP35-207ENST00000530546 TPD52L1Q16890 204 aaPredicted RBP13.27□□□□□ -0.28
USP35-207ENST00000530546 DRC7Q8IY82 874 aa13.27□□□□□ -0.28
USP35-207ENST00000530546 TMTC2Q8N394 836 aa13.27□□□□□ -0.28
USP35-207ENST00000530546 ENAHQ8N8S7 591 aaPredicted RBP13.27□□□□□ -0.28
USP35-207ENST00000530546 GRAPLQ8TC17 118 aaPredicted RBP13.27□□□□□ -0.28
USP35-207ENST00000530546 ZSCAN10Q96SZ4 725 aaPredicted RBP13.27□□□□□ -0.28
USP35-207ENST00000530546 NOL10Q9BSC4 688 aaKnown RBP13.27□□□□□ -0.28
USP35-207ENST00000530546 BRIP1Q9BX63 1249 aa13.27□□□□□ -0.28
USP35-207ENST00000530546 CRNKL1Q9BZJ0 848 aaKnown RBP13.27□□□□□ -0.28
USP35-207ENST00000530546 TRIM5Q9C035 493 aa13.27□□□□□ -0.28
USP35-207ENST00000530546 EFCC1Q9HA90 598 aa13.27□□□□□ -0.28
USP35-207ENST00000530546 TRPC5Q9UL62 973 aaPredicted RBP13.27□□□□□ -0.28
USP35-207ENST00000530546 A0A1W2PQ27 194 aa13.27□□□□□ -0.29
USP35-207ENST00000530546 A0A1W2PQ64 194 aa13.27□□□□□ -0.29
USP35-207ENST00000530546 A0A1W2PQD8 194 aa13.27□□□□□ -0.29
USP35-207ENST00000530546 NAA30Q147X3 362 aaPredicted RBP13.27□□□□□ -0.29
USP35-207ENST00000530546 STX1AQ16623 288 aa13.27□□□□□ -0.29
USP35-207ENST00000530546 IFIT1BQ5T764 474 aaKnown RBP13.27□□□□□ -0.29
USP35-207ENST00000530546 PRR5LQ6MZQ0 368 aa13.27□□□□□ -0.29
USP35-207ENST00000530546 RPGRQ92834 1020 aaKnown RBP13.27□□□□□ -0.29
USP35-207ENST00000530546 ANAPC4Q9UJX5 808 aa13.27□□□□□ -0.29
USP35-207ENST00000530546 ZNF831Q5JPB2 1677 aa13.26□□□□□ -0.29
USP35-207ENST00000530546 GOLGA6L19H0YKK7 550 aa13.26□□□□□ -0.29
USP35-207ENST00000530546 BIN1O00499 593 aa13.26□□□□□ -0.29
USP35-207ENST00000530546 NMT2O60551 498 aa13.26□□□□□ -0.29
USP35-207ENST00000530546 RBM6P78332 1123 aaKnown RBP13.26□□□□□ -0.29
USP35-207ENST00000530546 SLC39A14Q15043 492 aa13.26□□□□□ -0.29
USP35-207ENST00000530546 SAFBQ15424 915 aaKnown RBP eCLIP13.26□□□□□ -0.29
USP35-207ENST00000530546 SEC23AQ15436 765 aa13.26□□□□□ -0.29
USP35-207ENST00000530546 DIS3L2Q8IYB7 885 aaKnown RBP13.26□□□□□ -0.29
USP35-207ENST00000530546 CRACR2BQ8N4Y2 399 aaPredicted RBP13.26□□□□□ -0.29
USP35-207ENST00000530546 FBXO41Q8TF61 875 aa13.26□□□□□ -0.29
USP35-207ENST00000530546 WASF1Q92558 559 aa13.26□□□□□ -0.29
USP35-207ENST00000530546 CLIC6Q96NY7 704 aa13.26□□□□□ -0.29
USP35-207ENST00000530546 QTRT2Q9H974 415 aaKnown RBP13.26□□□□□ -0.29
USP35-207ENST00000530546 FEZ2Q9UHY8 353 aaPredicted RBP13.26□□□□□ -0.29
USP35-207ENST00000530546 MYH15Q9Y2K3 1946 aa13.26□□□□□ -0.29
USP35-207ENST00000530546 TRIM37O94972 964 aa13.26□□□□□ -0.29
USP35-207ENST00000530546 PFKFB1P16118 471 aa13.26□□□□□ -0.29
USP35-207ENST00000530546 BMS1Q14692 1282 aaKnown RBP13.26□□□□□ -0.29
USP35-207ENST00000530546 DCP1AQ9NPI6 582 aaPredicted RBP13.26□□□□□ -0.29
USP35-207ENST00000530546 NHSQ6T4R5 1651 aa13.26□□□□□ -0.29
USP35-207ENST00000530546 THSD7AQ9UPZ6 1657 aa13.26□□□□□ -0.29
USP35-207ENST00000530546 CCDC196A0A1B0GTZ2 297 aa13.26□□□□□ -0.29
USP35-207ENST00000530546 ZNF202O95125 648 aa13.26□□□□□ -0.29
USP35-207ENST00000530546 AKAP17AQ02040 695 aaKnown RBP13.26□□□□□ -0.29
USP35-207ENST00000530546 NR5A1Q13285 461 aa13.26□□□□□ -0.29
USP35-207ENST00000530546 DIXDC1Q155Q3 683 aa13.26□□□□□ -0.29
USP35-207ENST00000530546 GRIK5Q16478 980 aa13.26□□□□□ -0.29
USP35-207ENST00000530546 AXDND1Q5T1B0 1012 aaPredicted RBP13.26□□□□□ -0.29
USP35-207ENST00000530546 ISM2Q6H9L7 571 aa13.26□□□□□ -0.29
USP35-207ENST00000530546 FBXO38Q6PIJ6 1188 aa13.26□□□□□ -0.29
USP35-207ENST00000530546 NBPF11Q86T75 865 aa13.26□□□□□ -0.29
USP35-207ENST00000530546 IQCA1Q86XH1 822 aa13.26□□□□□ -0.29
USP35-207ENST00000530546 MCM9Q9NXL9 1143 aa13.26□□□□□ -0.29
USP35-207ENST00000530546 MROH7-TTC4A0A0A0MT08 1334 aa13.25□□□□□ -0.29
USP35-207ENST00000530546 STK36Q9NRP7 1315 aa13.25□□□□□ -0.29
USP35-207ENST00000530546 CACNA1SQ13698 1873 aa13.25□□□□□ -0.29
USP35-207ENST00000530546 BECN2A8MW95 431 aa13.25□□□□□ -0.29
USP35-207ENST00000530546 NEMFO60524 1076 aa13.25□□□□□ -0.29
USP35-207ENST00000530546 ZRSR1Q15695 479 aaKnown RBP13.25□□□□□ -0.29
USP35-207ENST00000530546 CATIPQ7Z7H3 387 aa13.25□□□□□ -0.29
USP35-207ENST00000530546 PLA2G4DQ86XP0 818 aa13.25□□□□□ -0.29
USP35-207ENST00000530546 TIAM2Q8IVF5 1701 aa13.25□□□□□ -0.29
USP35-207ENST00000530546 PLEKHA8P1O95397 391 aa13.25□□□□□ -0.29
USP35-207ENST00000530546 DEXIO95424 95 aa13.25□□□□□ -0.29
USP35-207ENST00000530546 SERPINB2P05120 415 aa13.25□□□□□ -0.29
USP35-207ENST00000530546 LDHBP07195 334 aaKnown RBP13.25□□□□□ -0.29
USP35-207ENST00000530546 USP17L8P0C7I0 530 aa13.25□□□□□ -0.29
USP35-207ENST00000530546 SPECC1Q5M775 1068 aa13.25□□□□□ -0.29
USP35-207ENST00000530546 SAMD1Q6SPF0 538 aaPredicted RBP13.25□□□□□ -0.29
USP35-207ENST00000530546 TDRD7Q8NHU6 1098 aaKnown RBP13.25□□□□□ -0.29
USP35-207ENST00000530546 YY1AP1Q9H869 796 aa13.25□□□□□ -0.29
USP35-207ENST00000530546 EP400Q96L91 3159 aa13.25□□□□□ -0.29
USP35-207ENST00000530546 CHD4Q14839 1912 aa13.24□□□□□ -0.29
USP35-207ENST00000530546 BAZ2AQ9UIF9 1905 aaKnown RBP13.24□□□□□ -0.29
USP35-207ENST00000530546 MMP1P03956 469 aa13.24□□□□□ -0.29
USP35-207ENST00000530546 GYS1P13807 737 aa13.24□□□□□ -0.29
USP35-207ENST00000530546 CDC25BP30305 580 aa13.24□□□□□ -0.29
USP35-207ENST00000530546 USP5P45974 858 aa13.24□□□□□ -0.29
USP35-207ENST00000530546 GPSM2P81274 684 aa13.24□□□□□ -0.29
USP35-207ENST00000530546 LRMPQ12912 555 aa13.24□□□□□ -0.29
USP35-207ENST00000530546 NOSTRINQ8IVI9 506 aa13.24□□□□□ -0.29
USP35-207ENST00000530546 OXER1Q8TDS5 423 aa13.24□□□□□ -0.29
USP35-207ENST00000530546 ANO10Q9NW15 660 aa13.24□□□□□ -0.29
USP35-207ENST00000530546 VPS54Q9P1Q0 977 aa13.24□□□□□ -0.29
USP35-207ENST00000530546 ZNF215Q9UL58 517 aaPredicted RBP13.24□□□□□ -0.29
USP35-207ENST00000530546 CASZ1Q86V15 1759 aa13.24□□□□□ -0.29
USP35-207ENST00000530546 ZNF75DP51815 510 aa13.24□□□□□ -0.29
USP35-207ENST00000530546 HNRNPH2P55795 449 aaKnown RBP13.24□□□□□ -0.29
USP35-207ENST00000530546 PTPAQ15257 358 aa13.24□□□□□ -0.29
USP35-207ENST00000530546 TEX2Q8IWB9 1127 aa13.24□□□□□ -0.29
USP35-207ENST00000530546 A0A1B0GUL6 1792 aa13.24□□□□□ -0.29
USP35-207ENST00000530546 TNRC6CQ9HCJ0 1690 aaKnown RBP13.24□□□□□ -0.29
USP35-207ENST00000530546 UFL1O94874 794 aa13.23□□□□□ -0.29
USP35-207ENST00000530546 SLC3A2P08195 630 aaKnown RBP13.23□□□□□ -0.29
USP35-207ENST00000530546 CMA1P23946 247 aa13.23□□□□□ -0.29
USP35-207ENST00000530546 IQCB1Q15051 598 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms