RNA–Protein interactions for RNA: ENST00000530451.1

SYVN1-212, Transcript of synoviolin 1, humanhuman

TSL 5

Gene SYVN1, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-212ENST00000530451 SH3D19Q5HYK7 790 aa23.38■■□□□ 1.33
SYVN1-212ENST00000530451 METTL16Q86W50 562 aaKnown RBP23.38■■□□□ 1.33
SYVN1-212ENST00000530451 RPAP2Q8IXW5 612 aaPredicted RBP23.38■■□□□ 1.33
SYVN1-212ENST00000530451 SHISA4Q96DD7 197 aa23.38■■□□□ 1.33
SYVN1-212ENST00000530451 WDR18Q9BV38 432 aa23.38■■□□□ 1.33
SYVN1-212ENST00000530451 RNF208Q9H0X6 261 aa23.38■■□□□ 1.33
SYVN1-212ENST00000530451 RCAN3Q9UKA8 241 aa23.38■■□□□ 1.33
SYVN1-212ENST00000530451 FAM110CQ1W6H9 321 aa23.37■■□□□ 1.33
SYVN1-212ENST00000530451 CLASRPQ8N2M8 674 aaKnown RBP23.37■■□□□ 1.33
SYVN1-212ENST00000530451 SLAIN1Q8ND83 568 aa23.37■■□□□ 1.33
SYVN1-212ENST00000530451 KIF1BPQ96EK5 621 aa23.37■■□□□ 1.33
SYVN1-212ENST00000530451 DNAJC2Q99543 621 aaKnown RBP23.37■■□□□ 1.33
SYVN1-212ENST00000530451 ZBTB40Q9NUA8 1239 aa23.37■■□□□ 1.33
SYVN1-212ENST00000530451 TMOD4Q9NZQ9 345 aa23.37■■□□□ 1.33
SYVN1-212ENST00000530451 ZBTB21Q9ULJ3 1066 aa23.37■■□□□ 1.33
SYVN1-212ENST00000530451 PLXNB2O15031 1838 aa23.37■■□□□ 1.33
SYVN1-212ENST00000530451 BAZ2AQ9UIF9 1905 aaKnown RBP23.36■■□□□ 1.33
SYVN1-212ENST00000530451 HMMRO75330 724 aa23.36■■□□□ 1.33
SYVN1-212ENST00000530451 IFIT2P09913 472 aaKnown RBP23.36■■□□□ 1.33
SYVN1-212ENST00000530451 BACE1P56817 501 aa23.36■■□□□ 1.33
SYVN1-212ENST00000530451 COA7Q96BR5 231 aa23.36■■□□□ 1.33
SYVN1-212ENST00000530451 UNC93B1Q9H1C4 597 aa23.36■■□□□ 1.33
SYVN1-212ENST00000530451 PEX10O60683 326 aa23.35■■□□□ 1.33
SYVN1-212ENST00000530451 GCLCP48506 637 aaPredicted RBP23.35■■□□□ 1.33
SYVN1-212ENST00000530451 IRX3P78415 501 aaPredicted RBP23.35■■□□□ 1.33
SYVN1-212ENST00000530451 DDX60LQ5H9U9 1706 aaKnown RBP23.35■■□□□ 1.33
SYVN1-212ENST00000530451 USP17L10C9JJH3 530 aa23.34■■□□□ 1.33
SYVN1-212ENST00000530451 GOLIM4O00461 696 aa23.34■■□□□ 1.33
SYVN1-212ENST00000530451 GH2P01242 217 aa23.34■■□□□ 1.33
SYVN1-212ENST00000530451 INHAP05111 366 aa23.34■■□□□ 1.33
SYVN1-212ENST00000530451 SLC9C2Q5TAH2 1124 aa23.34■■□□□ 1.33
SYVN1-212ENST00000530451 EDC3Q96F86 508 aaKnown RBP23.34■■□□□ 1.33
SYVN1-212ENST00000530451 MAGEB6P1A0A0J9YX57 407 aa23.33■■□□□ 1.33
SYVN1-212ENST00000530451 GJB1P08034 283 aa23.33■■□□□ 1.33
SYVN1-212ENST00000530451 TTF1Q15361 905 aaPredicted RBP23.33■■□□□ 1.33
SYVN1-212ENST00000530451 C20orf194Q5TEA3 1177 aa23.33■■□□□ 1.33
SYVN1-212ENST00000530451 CERS3Q8IU89 383 aa23.33■■□□□ 1.33
SYVN1-212ENST00000530451 P2RX7Q99572 595 aaKnown RBP23.33■■□□□ 1.33
SYVN1-212ENST00000530451 RIOK1Q9BRS2 568 aaKnown RBP23.33■■□□□ 1.33
SYVN1-212ENST00000530451 C19orf81C9J6K1 198 aa23.32■■□□□ 1.32
SYVN1-212ENST00000530451 PDE6AP16499 860 aa23.32■■□□□ 1.32
SYVN1-212ENST00000530451 GJA8P48165 433 aa23.32■■□□□ 1.32
SYVN1-212ENST00000530451 IRF5Q13568 498 aa23.32■■□□□ 1.32
SYVN1-212ENST00000530451 ZYXQ15942 572 aaKnown RBP23.32■■□□□ 1.32
SYVN1-212ENST00000530451 NKX2-3Q8TAU0 364 aa23.32■■□□□ 1.32
SYVN1-212ENST00000530451 SERPINB13Q9UIV8 391 aa23.32■■□□□ 1.32
SYVN1-212ENST00000530451 ZNF532Q9HCE3 1301 aa23.32■■□□□ 1.32
SYVN1-212ENST00000530451 PLCD1P51178 756 aa23.31■■□□□ 1.32
SYVN1-212ENST00000530451 TATDN1Q6P1N9 297 aa23.31■■□□□ 1.32
SYVN1-212ENST00000530451 TTC6Q86TZ1 520 aa23.31■■□□□ 1.32
SYVN1-212ENST00000530451 PXYLP1Q8TE99 480 aa23.31■■□□□ 1.32
SYVN1-212ENST00000530451 U2AF1L4Q8WU68 220 aaKnown RBP23.31■■□□□ 1.32
SYVN1-212ENST00000530451 GCC1Q96CN9 775 aa23.31■■□□□ 1.32
SYVN1-212ENST00000530451 GINM1Q9NU53 330 aa23.31■■□□□ 1.32
SYVN1-212ENST00000530451 RAB11FIP3O75154 756 aa23.3■■□□□ 1.32
SYVN1-212ENST00000530451 POLR3DP05423 398 aaPredicted RBP23.3■■□□□ 1.32
SYVN1-212ENST00000530451 HOXA7P31268 230 aaPredicted RBP23.3■■□□□ 1.32
SYVN1-212ENST00000530451 EVX2Q03828 476 aa23.3■■□□□ 1.32
SYVN1-212ENST00000530451 RAB3GAP1Q15042 981 aa23.3■■□□□ 1.32
SYVN1-212ENST00000530451 BOLA2Q9H3K6 86 aa23.3■■□□□ 1.32
SYVN1-212ENST00000530451 EMILIN3Q9NT22 766 aa23.3■■□□□ 1.32
SYVN1-212ENST00000530451 HERVK_113P62684 666 aa23.29■■□□□ 1.32
SYVN1-212ENST00000530451 SLFNL1Q499Z3 407 aa23.29■■□□□ 1.32
SYVN1-212ENST00000530451 CERKLQ49MI3 558 aaPredicted RBP23.29■■□□□ 1.32
SYVN1-212ENST00000530451 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.29■■□□□ 1.32
SYVN1-212ENST00000530451 DPF3Q92784 378 aa23.29■■□□□ 1.32
SYVN1-212ENST00000530451 FEZ1Q99689 392 aa23.29■■□□□ 1.32
SYVN1-212ENST00000530451 CRNKL1Q9BZJ0 848 aaKnown RBP23.29■■□□□ 1.32
SYVN1-212ENST00000530451 EHD4Q9H223 541 aa23.29■■□□□ 1.32
SYVN1-212ENST00000530451 CHMP4BQ9H444 224 aaKnown RBP23.29■■□□□ 1.32
SYVN1-212ENST00000530451 TXNRD2Q9NNW7 524 aa23.29■■□□□ 1.32
SYVN1-212ENST00000530451 MORF4L1Q9UBU8 362 aa23.29■■□□□ 1.32
SYVN1-212ENST00000530451 ABCB5Q2M3G0 1257 aa23.28■■□□□ 1.32
SYVN1-212ENST00000530451 HABP4Q5JVS0 413 aaKnown RBP23.28■■□□□ 1.32
SYVN1-212ENST00000530451 TMED8Q6PL24 325 aaPredicted RBP23.28■■□□□ 1.32
SYVN1-212ENST00000530451 USP17L2Q6R6M4 530 aa23.28■■□□□ 1.32
SYVN1-212ENST00000530451 LCORLQ8N3X6 602 aa23.28■■□□□ 1.32
SYVN1-212ENST00000530451 SDR42E1Q8WUS8 393 aa23.28■■□□□ 1.32
SYVN1-212ENST00000530451 DEFB118Q96PH6 123 aa23.28■■□□□ 1.32
SYVN1-212ENST00000530451 PAGR1Q9BTK6 254 aa23.28■■□□□ 1.32
SYVN1-212ENST00000530451 TCRBV5S4A2TA0A5A2 114 aa23.27■■□□□ 1.32
SYVN1-212ENST00000530451 H0YGN5 161 aa23.27■■□□□ 1.32
SYVN1-212ENST00000530451 SGPL1O95470 568 aa23.27■■□□□ 1.32
SYVN1-212ENST00000530451 SHMT1P34896 483 aa23.27■■□□□ 1.32
SYVN1-212ENST00000530451 PAG1Q9NWQ8 432 aa23.27■■□□□ 1.32
SYVN1-212ENST00000530451 MCM9Q9NXL9 1143 aa23.27■■□□□ 1.32
SYVN1-212ENST00000530451 GJD2Q9UKL4 321 aa23.27■■□□□ 1.32
SYVN1-212ENST00000530451 ALPK3Q96L96 1907 aa23.26■■□□□ 1.31
SYVN1-212ENST00000530451 SMARCA5O60264 1052 aaPredicted RBP23.26■■□□□ 1.31
SYVN1-212ENST00000530451 TFRCP02786 760 aaKnown RBP23.26■■□□□ 1.31
SYVN1-212ENST00000530451 GPRC5AQ8NFJ5 357 aa23.26■■□□□ 1.31
SYVN1-212ENST00000530451 ACER1Q8TDN7 264 aa23.26■■□□□ 1.31
SYVN1-212ENST00000530451 ARMT1Q9H993 441 aa23.26■■□□□ 1.31
SYVN1-212ENST00000530451 CABP5Q9NP86 173 aa23.26■■□□□ 1.31
SYVN1-212ENST00000530451 RBPJLQ9UBG7 517 aa23.26■■□□□ 1.31
SYVN1-212ENST00000530451 TRIOBPQ9H2D6 2365 aa23.26■■□□□ 1.31
SYVN1-212ENST00000530451 FARP2O94887 1054 aaPredicted RBP23.25■■□□□ 1.31
SYVN1-212ENST00000530451 CYP2D6P10635 497 aa23.25■■□□□ 1.31
SYVN1-212ENST00000530451 CYP2B6P20813 491 aa23.25■■□□□ 1.31
SYVN1-212ENST00000530451 TRIM32Q13049 653 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms