RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 COA7Q96BR5 231 aa25.42■■□□□ 1.66
SMPD1-204ENST00000530395 ANTXR1Q9H6X2 564 aa25.42■■□□□ 1.66
SMPD1-204ENST00000530395 ADCY3O60266 1144 aa25.41■■□□□ 1.66
SMPD1-204ENST00000530395 GDF11O95390 407 aa25.41■■□□□ 1.66
SMPD1-204ENST00000530395 CCL5P13501 91 aa25.41■■□□□ 1.66
SMPD1-204ENST00000530395 FLT3LGP49771 235 aa25.41■■□□□ 1.66
SMPD1-204ENST00000530395 BACE1P56817 501 aa25.41■■□□□ 1.66
SMPD1-204ENST00000530395 ASCC2Q9H1I8 757 aaPredicted RBP25.41■■□□□ 1.66
SMPD1-204ENST00000530395 ZBTB40Q9NUA8 1239 aa25.41■■□□□ 1.66
SMPD1-204ENST00000530395 ZBTB21Q9ULJ3 1066 aa25.41■■□□□ 1.66
SMPD1-204ENST00000530395 DOCK3Q8IZD9 2030 aa25.41■■□□□ 1.66
SMPD1-204ENST00000530395 NAV1Q8NEY1 1877 aa25.4■■□□□ 1.66
SMPD1-204ENST00000530395 APBB1O00213 710 aa25.4■■□□□ 1.66
SMPD1-204ENST00000530395 IFIT2P09913 472 aaKnown RBP25.4■■□□□ 1.66
SMPD1-204ENST00000530395 IRF5Q13568 498 aa25.4■■□□□ 1.66
SMPD1-204ENST00000530395 RNF208Q9H0X6 261 aa25.4■■□□□ 1.66
SMPD1-204ENST00000530395 RCAN3Q9UKA8 241 aa25.4■■□□□ 1.66
SMPD1-204ENST00000530395 C19orf81C9J6K1 198 aa25.39■■□□□ 1.66
SMPD1-204ENST00000530395 GJB1P08034 283 aa25.39■■□□□ 1.66
SMPD1-204ENST00000530395 IRX3P78415 501 aaPredicted RBP25.39■■□□□ 1.66
SMPD1-204ENST00000530395 PXYLP1Q8TE99 480 aa25.39■■□□□ 1.66
SMPD1-204ENST00000530395 USP17L10C9JJH3 530 aa25.38■■□□□ 1.65
SMPD1-204ENST00000530395 RAB11FIP3O75154 756 aa25.38■■□□□ 1.65
SMPD1-204ENST00000530395 JAG1P78504 1218 aa25.38■■□□□ 1.65
SMPD1-204ENST00000530395 TTC6Q86TZ1 520 aa25.38■■□□□ 1.65
SMPD1-204ENST00000530395 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.38■■□□□ 1.65
SMPD1-204ENST00000530395 EHD4Q9H223 541 aa25.38■■□□□ 1.65
SMPD1-204ENST00000530395 SERPINB13Q9UIV8 391 aa25.38■■□□□ 1.65
SMPD1-204ENST00000530395 CEP290O15078 2479 aa25.38■■□□□ 1.65
SMPD1-204ENST00000530395 DDX60LQ5H9U9 1706 aaKnown RBP25.37■■□□□ 1.65
SMPD1-204ENST00000530395 GJA8P48165 433 aa25.37■■□□□ 1.65
SMPD1-204ENST00000530395 SHISA4Q96DD7 197 aa25.37■■□□□ 1.65
SMPD1-204ENST00000530395 TAOK2Q9UL54 1235 aa25.37■■□□□ 1.65
SMPD1-204ENST00000530395 MAGEB6P1A0A0J9YX57 407 aa25.36■■□□□ 1.65
SMPD1-204ENST00000530395 INHAP05111 366 aa25.36■■□□□ 1.65
SMPD1-204ENST00000530395 ELNP15502 786 aa25.36■■□□□ 1.65
SMPD1-204ENST00000530395 HOXA7P31268 230 aaPredicted RBP25.36■■□□□ 1.65
SMPD1-204ENST00000530395 SIRT2Q8IXJ6 389 aa25.36■■□□□ 1.65
SMPD1-204ENST00000530395 DNAJC2Q99543 621 aaKnown RBP25.36■■□□□ 1.65
SMPD1-204ENST00000530395 BCL11AQ9H165 835 aa25.36■■□□□ 1.65
SMPD1-204ENST00000530395 GH2P01242 217 aa25.35■■□□□ 1.65
SMPD1-204ENST00000530395 PDE6AP16499 860 aa25.35■■□□□ 1.65
SMPD1-204ENST00000530395 SHROOM1Q2M3G4 852 aaPredicted RBP25.35■■□□□ 1.65
SMPD1-204ENST00000530395 SLC9C2Q5TAH2 1124 aa25.35■■□□□ 1.65
SMPD1-204ENST00000530395 RIOK1Q9BRS2 568 aaKnown RBP25.35■■□□□ 1.65
SMPD1-204ENST00000530395 UNC93B1Q9H1C4 597 aa25.35■■□□□ 1.65
SMPD1-204ENST00000530395 GOLIM4O00461 696 aa25.34■■□□□ 1.65
SMPD1-204ENST00000530395 TATDN1Q6P1N9 297 aa25.34■■□□□ 1.65
SMPD1-204ENST00000530395 CRNKL1Q9BZJ0 848 aaKnown RBP25.34■■□□□ 1.65
SMPD1-204ENST00000530395 MORF4L1Q9UBU8 362 aa25.34■■□□□ 1.65
SMPD1-204ENST00000530395 USP17L2Q6R6M4 530 aa25.33■■□□□ 1.65
SMPD1-204ENST00000530395 U2AF1L4Q8WU68 220 aaKnown RBP25.33■■□□□ 1.65
SMPD1-204ENST00000530395 POLR3DP05423 398 aaPredicted RBP25.32■■□□□ 1.64
SMPD1-204ENST00000530395 HERVK_113P62684 666 aa25.32■■□□□ 1.64
SMPD1-204ENST00000530395 CERKLQ49MI3 558 aaPredicted RBP25.32■■□□□ 1.64
SMPD1-204ENST00000530395 GTF3C2Q8WUA4 911 aaPredicted RBP25.32■■□□□ 1.64
SMPD1-204ENST00000530395 P2RX7Q99572 595 aaKnown RBP25.32■■□□□ 1.64
SMPD1-204ENST00000530395 FEZ1Q99689 392 aa25.32■■□□□ 1.64
SMPD1-204ENST00000530395 ZNF532Q9HCE3 1301 aa25.32■■□□□ 1.64
SMPD1-204ENST00000530395 CAPN2P17655 700 aa25.31■■□□□ 1.64
SMPD1-204ENST00000530395 PDE3AQ14432 1141 aa25.31■■□□□ 1.64
SMPD1-204ENST00000530395 ABCB5Q2M3G0 1257 aa25.31■■□□□ 1.64
SMPD1-204ENST00000530395 CABP5Q9NP86 173 aa25.31■■□□□ 1.64
SMPD1-204ENST00000530395 MYH7P12883 1935 aa25.31■■□□□ 1.64
SMPD1-204ENST00000530395 MYH8P13535 1937 aa25.3■■□□□ 1.64
SMPD1-204ENST00000530395 SGPL1O95470 568 aa25.3■■□□□ 1.64
SMPD1-204ENST00000530395 RAB3GAP1Q15042 981 aa25.3■■□□□ 1.64
SMPD1-204ENST00000530395 GPRC5AQ8NFJ5 357 aa25.3■■□□□ 1.64
SMPD1-204ENST00000530395 HTATIP2Q9BUP3 242 aa25.3■■□□□ 1.64
SMPD1-204ENST00000530395 PLXNB2O15031 1838 aa25.29■■□□□ 1.64
SMPD1-204ENST00000530395 USP14P54578 494 aa25.29■■□□□ 1.64
SMPD1-204ENST00000530395 EMILIN3Q9NT22 766 aa25.29■■□□□ 1.64
SMPD1-204ENST00000530395 PAG1Q9NWQ8 432 aa25.29■■□□□ 1.64
SMPD1-204ENST00000530395 FARP2O94887 1054 aaPredicted RBP25.28■■□□□ 1.64
SMPD1-204ENST00000530395 HMGCRP04035 888 aa25.28■■□□□ 1.64
SMPD1-204ENST00000530395 PLCD1P51178 756 aa25.28■■□□□ 1.64
SMPD1-204ENST00000530395 HABP4Q5JVS0 413 aaKnown RBP25.28■■□□□ 1.64
SMPD1-204ENST00000530395 CCAR1Q8IX12 1150 aaKnown RBP25.28■■□□□ 1.64
SMPD1-204ENST00000530395 DPF3Q92784 378 aa25.28■■□□□ 1.64
SMPD1-204ENST00000530395 C12orf42Q96LP6 360 aa25.28■■□□□ 1.64
SMPD1-204ENST00000530395 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.28■■□□□ 1.64
SMPD1-204ENST00000530395 MCM9Q9NXL9 1143 aa25.28■■□□□ 1.64
SMPD1-204ENST00000530395 TCRBV5S4A2TA0A5A2 114 aa25.27■■□□□ 1.64
SMPD1-204ENST00000530395 ATP5JP18859 108 aa25.27■■□□□ 1.64
SMPD1-204ENST00000530395 SHMT1P34896 483 aa25.27■■□□□ 1.64
SMPD1-204ENST00000530395 ZYXQ15942 572 aaKnown RBP25.27■■□□□ 1.64
SMPD1-204ENST00000530395 UBE2Q1Q7Z7E8 422 aa25.27■■□□□ 1.64
SMPD1-204ENST00000530395 DEFB118Q96PH6 123 aa25.27■■□□□ 1.64
SMPD1-204ENST00000530395 LRRCC1Q9C099 1032 aa25.27■■□□□ 1.64
SMPD1-204ENST00000530395 BOLA2Q9H3K6 86 aa25.27■■□□□ 1.64
SMPD1-204ENST00000530395 PAK6Q9NQU5 681 aaPredicted RBP25.27■■□□□ 1.64
SMPD1-204ENST00000530395 GJD2Q9UKL4 321 aa25.27■■□□□ 1.64
SMPD1-204ENST00000530395 TFRCP02786 760 aaKnown RBP25.26■■□□□ 1.63
SMPD1-204ENST00000530395 MAPK4P31152 587 aa25.26■■□□□ 1.63
SMPD1-204ENST00000530395 LCORLQ8N3X6 602 aa25.26■■□□□ 1.63
SMPD1-204ENST00000530395 SOCS4Q8WXH5 440 aa25.26■■□□□ 1.63
SMPD1-204ENST00000530395 EDC3Q96F86 508 aaKnown RBP25.26■■□□□ 1.63
SMPD1-204ENST00000530395 PAGR1Q9BTK6 254 aa25.26■■□□□ 1.63
SMPD1-204ENST00000530395 KIAA1683Q9H0B3 1180 aa25.26■■□□□ 1.63
SMPD1-204ENST00000530395 TXNRD2Q9NNW7 524 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms