RNA–Protein interactions for RNA: ENST00000530384.5

CCS-205, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,196 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-205ENST00000530384 PLCD1P51178 756 aa20.53■□□□□ 0.88
CCS-205ENST00000530384 SP3Q02447 781 aa20.53■□□□□ 0.88
CCS-205ENST00000530384 SPP2Q13103 211 aa20.53■□□□□ 0.88
CCS-205ENST00000530384 B4GALNT3Q6L9W6 998 aa20.53■□□□□ 0.88
CCS-205ENST00000530384 GADL1Q6ZQY3 521 aa20.53■□□□□ 0.88
CCS-205ENST00000530384 AMOTL1Q8IY63 956 aa20.53■□□□□ 0.88
CCS-205ENST00000530384 FSD1Q9BTV5 496 aa20.53■□□□□ 0.88
CCS-205ENST00000530384 SLC4A4Q9Y6R1 1079 aa20.53■□□□□ 0.88
CCS-205ENST00000530384 IRX6P78412 446 aaPredicted RBP20.52■□□□□ 0.88
CCS-205ENST00000530384 GPAT2Q6NUI2 795 aa20.52■□□□□ 0.88
CCS-205ENST00000530384 CHD1LQ86WJ1 897 aa20.52■□□□□ 0.88
CCS-205ENST00000530384 PARK7Q99497 189 aaKnown RBP20.52■□□□□ 0.88
CCS-205ENST00000530384 WDR18Q9BV38 432 aa20.52■□□□□ 0.88
CCS-205ENST00000530384 ZBTB21Q9ULJ3 1066 aa20.52■□□□□ 0.88
CCS-205ENST00000530384 SLC45A1Q9Y2W3 748 aa20.52■□□□□ 0.88
CCS-205ENST00000530384 NUCB1Q02818 461 aa20.51■□□□□ 0.87
CCS-205ENST00000530384 GABPAQ06546 454 aa20.51■□□□□ 0.87
CCS-205ENST00000530384 CERKLQ49MI3 558 aaPredicted RBP20.51■□□□□ 0.87
CCS-205ENST00000530384 PROCA1Q8NCQ7 364 aaPredicted RBP20.51■□□□□ 0.87
CCS-205ENST00000530384 OSBP2Q969R2 916 aa20.51■□□□□ 0.87
CCS-205ENST00000530384 STRBPQ96SI9 672 aaKnown RBP20.51■□□□□ 0.87
CCS-205ENST00000530384 LOC285556D6RIA3 1793 aa20.5■□□□□ 0.87
CCS-205ENST00000530384 SHMT1P34896 483 aa20.5■□□□□ 0.87
CCS-205ENST00000530384 EVI5LQ96CN4 794 aa20.5■□□□□ 0.87
CCS-205ENST00000530384 CABP5Q9NP86 173 aa20.5■□□□□ 0.87
CCS-205ENST00000530384 SWAP70Q9UH65 585 aa20.5■□□□□ 0.87
CCS-205ENST00000530384 AGTPBP1Q9UPW5 1226 aa20.5■□□□□ 0.87
CCS-205ENST00000530384 MYH8P13535 1937 aa20.5■□□□□ 0.87
CCS-205ENST00000530384 GH2P01242 217 aa20.49■□□□□ 0.87
CCS-205ENST00000530384 GNAT2P19087 354 aa20.49■□□□□ 0.87
CCS-205ENST00000530384 JAG1P78504 1218 aa20.49■□□□□ 0.87
CCS-205ENST00000530384 ARHGEF6Q15052 776 aa20.49■□□□□ 0.87
CCS-205ENST00000530384 ABCB5Q2M3G0 1257 aa20.49■□□□□ 0.87
CCS-205ENST00000530384 SH3D19Q5HYK7 790 aa20.49■□□□□ 0.87
CCS-205ENST00000530384 GIMAP6Q6P9H5 292 aa20.49■□□□□ 0.87
CCS-205ENST00000530384 CD99L2Q8TCZ2 262 aa20.49■□□□□ 0.87
CCS-205ENST00000530384 C19orf81C9J6K1 198 aa20.48■□□□□ 0.87
CCS-205ENST00000530384 USP17L12C9JPN9 530 aa20.48■□□□□ 0.87
CCS-205ENST00000530384 USP17L21D6R901 530 aa20.48■□□□□ 0.87
CCS-205ENST00000530384 GPAA1O43292 621 aa20.48■□□□□ 0.87
CCS-205ENST00000530384 CYP2D6P10635 497 aa20.48■□□□□ 0.87
CCS-205ENST00000530384 HMGCS2P54868 508 aa20.48■□□□□ 0.87
CCS-205ENST00000530384 BACE1P56817 501 aa20.48■□□□□ 0.87
CCS-205ENST00000530384 C12orf60Q5U649 245 aa20.48■□□□□ 0.87
CCS-205ENST00000530384 ARPP21Q9UBL0 812 aaPredicted RBP20.48■□□□□ 0.87
CCS-205ENST00000530384 TRIM17Q9Y577 477 aa20.48■□□□□ 0.87
CCS-205ENST00000530384 ADGRA2Q96PE1 1338 aa20.48■□□□□ 0.87
CCS-205ENST00000530384 USP17L10C9JJH3 530 aa20.47■□□□□ 0.87
CCS-205ENST00000530384 PABPC4Q13310 644 aaKnown RBP eCLIP20.47■□□□□ 0.872e-7■■■□□ 18
CCS-205ENST00000530384 MTMR2Q13614 643 aa20.47■□□□□ 0.87
CCS-205ENST00000530384 KIF22Q14807 665 aa20.47■□□□□ 0.87
CCS-205ENST00000530384 SHROOM1Q2M3G4 852 aaPredicted RBP20.47■□□□□ 0.87
CCS-205ENST00000530384 ZMYM1Q5SVZ6 1142 aa20.47■□□□□ 0.87
CCS-205ENST00000530384 FBXO46Q6PJ61 603 aaPredicted RBP20.47■□□□□ 0.87
CCS-205ENST00000530384 C17orf99Q6UX52 265 aa20.47■□□□□ 0.87
CCS-205ENST00000530384 TICAM2Q86XR7 235 aa20.47■□□□□ 0.87
CCS-205ENST00000530384 TMOD4Q9NZQ9 345 aa20.47■□□□□ 0.87
CCS-205ENST00000530384 PNMA3Q9UL41 463 aa20.47■□□□□ 0.87
CCS-205ENST00000530384 GSG1L2A8MUP6 293 aa20.46■□□□□ 0.87
CCS-205ENST00000530384 M0R2C6 588 aa20.46■□□□□ 0.87
CCS-205ENST00000530384 CYP2C8P10632 490 aa20.46■□□□□ 0.87
CCS-205ENST00000530384 EVX2Q03828 476 aa20.46■□□□□ 0.87
CCS-205ENST00000530384 RAB3GAP1Q15042 981 aa20.46■□□□□ 0.87
CCS-205ENST00000530384 CTR9Q6PD62 1173 aa20.46■□□□□ 0.87
CCS-205ENST00000530384 OTOP1Q7RTM1 612 aa20.46■□□□□ 0.87
CCS-205ENST00000530384 PLEKHM2Q8IWE5 1019 aa20.46■□□□□ 0.87
CCS-205ENST00000530384 OSBPL3Q9H4L5 887 aa20.46■□□□□ 0.87
CCS-205ENST00000530384 EFCC1Q9HA90 598 aa20.46■□□□□ 0.87
CCS-205ENST00000530384 CPA4Q9UI42 421 aa20.46■□□□□ 0.87
CCS-205ENST00000530384 LACTBP83111 547 aaPredicted RBP20.45■□□□□ 0.86
CCS-205ENST00000530384 SBK1Q52WX2 424 aa20.45■□□□□ 0.86
CCS-205ENST00000530384 TREML2Q5T2D2 321 aa20.45■□□□□ 0.86
CCS-205ENST00000530384 SMCR8Q8TEV9 937 aaPredicted RBP20.45■□□□□ 0.86
CCS-205ENST00000530384 DYNLL2Q96FJ2 89 aa20.45■□□□□ 0.86
CCS-205ENST00000530384 C16orf86Q6ZW13 317 aa20.44■□□□□ 0.86
CCS-205ENST00000530384 SLC44A5Q8NCS7 719 aa20.44■□□□□ 0.86
CCS-205ENST00000530384 CYP2D7A0A087X1C5 515 aa20.43■□□□□ 0.86
CCS-205ENST00000530384 CCDC85CA6NKD9 419 aa20.43■□□□□ 0.86
CCS-205ENST00000530384 TRIM6-TRIM34B2RNG4 842 aa20.43■□□□□ 0.86
CCS-205ENST00000530384 PATL2C9JE40 543 aaKnown RBP20.43■□□□□ 0.86
CCS-205ENST00000530384 MPHOSPH10O00566 681 aaKnown RBP20.43■□□□□ 0.86
CCS-205ENST00000530384 APPP05067 770 aa20.43■□□□□ 0.86
CCS-205ENST00000530384 BCRP11274 1271 aa20.43■□□□□ 0.86
CCS-205ENST00000530384 OSBPP22059 807 aa20.43■□□□□ 0.86
CCS-205ENST00000530384 TDO2P48775 406 aa20.43■□□□□ 0.86
CCS-205ENST00000530384 CDK8P49336 464 aa20.43■□□□□ 0.86
CCS-205ENST00000530384 USP17L2Q6R6M4 530 aa20.43■□□□□ 0.86
CCS-205ENST00000530384 TMEM179Q6ZVK1 233 aa20.43■□□□□ 0.86
CCS-205ENST00000530384 CCDC17Q96LX7 622 aa20.43■□□□□ 0.86
CCS-205ENST00000530384 SEC62Q99442 399 aaKnown RBP20.43■□□□□ 0.86
CCS-205ENST00000530384 FEZ1Q99689 392 aa20.43■□□□□ 0.86
CCS-205ENST00000530384 NACAP1Q9BZK3 213 aa20.43■□□□□ 0.86
CCS-205ENST00000530384 GNRH1P01148 92 aa20.42■□□□□ 0.86
CCS-205ENST00000530384 USP14P54578 494 aa20.42■□□□□ 0.86
CCS-205ENST00000530384 HELLSQ9NRZ9 838 aa20.42■□□□□ 0.86
CCS-205ENST00000530384 HPS5Q9UPZ3 1129 aa20.42■□□□□ 0.86
CCS-205ENST00000530384 HOXA7P31268 230 aaPredicted RBP20.41■□□□□ 0.86
CCS-205ENST00000530384 GUCY1A2P33402 732 aa20.41■□□□□ 0.86
CCS-205ENST00000530384 SEPT2Q15019 361 aa20.41■□□□□ 0.86
CCS-205ENST00000530384 IFNL3Q8IZI9 196 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms