RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 ZNF394Q53GI3 561 aa9.72□□□□□ -0.85
SVIP-204ENST00000530199 PRPF40BQ6NWY9 871 aaKnown RBP9.72□□□□□ -0.85
SVIP-204ENST00000530199 NCAPG2Q86XI2 1143 aa9.72□□□□□ -0.85
SVIP-204ENST00000530199 GTPBP3Q969Y2 492 aaKnown RBP9.72□□□□□ -0.85
SVIP-204ENST00000530199 TINF2Q9BSI4 451 aa9.72□□□□□ -0.85
SVIP-204ENST00000530199 ACBD3Q9H3P7 528 aa9.72□□□□□ -0.85
SVIP-204ENST00000530199 GGT7Q9UJ14 662 aa9.72□□□□□ -0.85
SVIP-204ENST00000530199 N4BP2Q86UW6 1770 aaPredicted RBP9.72□□□□□ -0.85
SVIP-204ENST00000530199 NSD3Q9BZ95 1437 aa9.72□□□□□ -0.85
SVIP-204ENST00000530199 A0A0G2JLW4 131 aa9.71□□□□□ -0.86
SVIP-204ENST00000530199 RACK1P63244 317 aaKnown RBP9.71□□□□□ -0.86
SVIP-204ENST00000530199 PLAURQ03405 335 aa9.71□□□□□ -0.86
SVIP-204ENST00000530199 HYAL2Q12891 473 aa9.71□□□□□ -0.86
SVIP-204ENST00000530199 SF3A1Q15459 793 aaKnown RBP9.71□□□□□ -0.86
SVIP-204ENST00000530199 RAB44Q7Z6P3 723 aaPredicted RBP9.71□□□□□ -0.86
SVIP-204ENST00000530199 C3orf58Q8NDZ4 430 aa9.71□□□□□ -0.86
SVIP-204ENST00000530199 SYTL4Q96C24 671 aaPredicted RBP9.71□□□□□ -0.86
SVIP-204ENST00000530199 DCAF5Q96JK2 942 aa9.71□□□□□ -0.86
SVIP-204ENST00000530199 USP47Q96K76 1375 aa9.71□□□□□ -0.86
SVIP-204ENST00000530199 TOGARAM1Q9Y4F4 1720 aa9.7□□□□□ -0.86
SVIP-204ENST00000530199 MAP2K1Q02750 393 aaPredicted RBP9.7□□□□□ -0.86
SVIP-204ENST00000530199 DHX32Q7L7V1 743 aaKnown RBP9.7□□□□□ -0.86
SVIP-204ENST00000530199 USP48Q86UV5 1035 aa9.7□□□□□ -0.86
SVIP-204ENST00000530199 AMIGO3Q86WK7 504 aa9.7□□□□□ -0.86
SVIP-204ENST00000530199 ZNF654Q8IZM8 581 aa9.7□□□□□ -0.86
SVIP-204ENST00000530199 ZKSCAN3Q9BRR0 538 aa9.7□□□□□ -0.86
SVIP-204ENST00000530199 SRA1Q9HD15 236 aaKnown RBP9.7□□□□□ -0.86
SVIP-204ENST00000530199 GMPR2Q9P2T1 348 aaKnown RBP9.7□□□□□ -0.86
SVIP-204ENST00000530199 PHF24Q9UPV7 400 aa9.7□□□□□ -0.86
SVIP-204ENST00000530199 PCDHGB7Q9Y5F8 929 aa9.7□□□□□ -0.86
SVIP-204ENST00000530199 KDM6AO15550 1401 aaPredicted RBP9.7□□□□□ -0.86
SVIP-204ENST00000530199 DOT1LQ8TEK3 1739 aa9.7□□□□□ -0.86
SVIP-204ENST00000530199 TAF1LQ8IZX4 1826 aa9.7□□□□□ -0.86
SVIP-204ENST00000530199 SBF1O95248 1867 aa9.7□□□□□ -0.86
SVIP-204ENST00000530199 NFAT5O94916 1531 aa9.69□□□□□ -0.86
SVIP-204ENST00000530199 KCNA3P22001 575 aa9.69□□□□□ -0.86
SVIP-204ENST00000530199 FGFR3P22607 806 aa9.69□□□□□ -0.86
SVIP-204ENST00000530199 FCGRTP55899 365 aa9.69□□□□□ -0.86
SVIP-204ENST00000530199 CEP120Q8N960 986 aa9.69□□□□□ -0.86
SVIP-204ENST00000530199 SLC43A3Q8NBI5 491 aa9.69□□□□□ -0.86
SVIP-204ENST00000530199 CNTNAP3BQ96NU0 1288 aa9.69□□□□□ -0.86
SVIP-204ENST00000530199 TCF12Q99081 682 aa9.69□□□□□ -0.86
SVIP-204ENST00000530199 OSMRQ99650 979 aa9.69□□□□□ -0.86
SVIP-204ENST00000530199 CNTNAP3Q9BZ76 1288 aa9.69□□□□□ -0.86
SVIP-204ENST00000530199 LIN7BQ9HAP6 207 aa9.69□□□□□ -0.86
SVIP-204ENST00000530199 CAPN10Q9HC96 672 aa9.69□□□□□ -0.86
SVIP-204ENST00000530199 ABCB6Q9NP58 842 aa9.69□□□□□ -0.86
SVIP-204ENST00000530199 UBR3Q6ZT12 1888 aa9.68□□□□□ -0.86
SVIP-204ENST00000530199 C4BP0C0L5 1744 aa9.68□□□□□ -0.86
SVIP-204ENST00000530199 TMEM238LA0A1B0GVL6 79 aa9.68□□□□□ -0.86
SVIP-204ENST00000530199 ACPPP15309 386 aa9.68□□□□□ -0.86
SVIP-204ENST00000530199 DPEP1P16444 411 aa9.68□□□□□ -0.86
SVIP-204ENST00000530199 TNNI2P48788 182 aa9.68□□□□□ -0.86
SVIP-204ENST00000530199 NEUROD1Q13562 356 aa9.68□□□□□ -0.86
SVIP-204ENST00000530199 ERMP1Q7Z2K6 904 aa9.68□□□□□ -0.86
SVIP-204ENST00000530199 CCNJLQ8IV13 435 aa9.68□□□□□ -0.86
SVIP-204ENST00000530199 DDX54Q8TDD1 881 aaKnown RBP9.68□□□□□ -0.86
SVIP-204ENST00000530199 NSUN5Q96P11 429 aaKnown RBP9.68□□□□□ -0.86
SVIP-204ENST00000530199 TTF2Q9UNY4 1162 aaKnown RBP9.68□□□□□ -0.86
SVIP-204ENST00000530199 PASKQ96RG2 1323 aa9.67□□□□□ -0.86
SVIP-204ENST00000530199 MMP10P09238 476 aa9.67□□□□□ -0.86
SVIP-204ENST00000530199 XRCC5P13010 732 aaKnown RBP9.67□□□□□ -0.86
SVIP-204ENST00000530199 SNRPBP14678 240 aaKnown RBP9.67□□□□□ -0.86
SVIP-204ENST00000530199 NRLP54845 237 aa9.67□□□□□ -0.86
SVIP-204ENST00000530199 CTBSQ01459 385 aa9.67□□□□□ -0.86
SVIP-204ENST00000530199 NOC4LQ9BVI4 516 aaKnown RBP9.67□□□□□ -0.86
SVIP-204ENST00000530199 OXCT2Q9BYC2 517 aaPredicted RBP9.67□□□□□ -0.86
SVIP-204ENST00000530199 DZANK1Q9NVP4 752 aa9.67□□□□□ -0.86
SVIP-204ENST00000530199 GNL2Q13823 731 aaKnown RBP9.66□□□□□ -0.86
SVIP-204ENST00000530199 FOXR1Q6PIV2 292 aa9.66□□□□□ -0.86
SVIP-204ENST00000530199 SMIM5Q71RC9 77 aa9.66□□□□□ -0.86
SVIP-204ENST00000530199 TRPM4Q8TD43 1214 aa9.66□□□□□ -0.86
SVIP-204ENST00000530199 ANKRD24Q8TF21 1146 aa9.66□□□□□ -0.86
SVIP-204ENST00000530199 GCC1Q96CN9 775 aa9.66□□□□□ -0.86
SVIP-204ENST00000530199 TRERF1Q96PN7 1200 aa9.66□□□□□ -0.86
SVIP-204ENST00000530199 PIM2Q9P1W9 311 aa9.66□□□□□ -0.86
SVIP-204ENST00000530199 PPM1HQ9ULR3 514 aa9.66□□□□□ -0.86
SVIP-204ENST00000530199 RASSF10A6NK89 507 aa9.65□□□□□ -0.86
SVIP-204ENST00000530199 ZBTB42B2RXF5 422 aa9.65□□□□□ -0.86
SVIP-204ENST00000530199 GPR25O00155 361 aa9.65□□□□□ -0.86
SVIP-204ENST00000530199 PPFIA3O75145 1194 aa9.65□□□□□ -0.86
SVIP-204ENST00000530199 GPLD1P80108 840 aa9.65□□□□□ -0.86
SVIP-204ENST00000530199 DALRD3Q5D0E6 543 aaKnown RBP9.65□□□□□ -0.86
SVIP-204ENST00000530199 DTHD1Q6ZMT9 781 aa9.65□□□□□ -0.86
SVIP-204ENST00000530199 UBXN4Q92575 508 aa9.65□□□□□ -0.86
SVIP-204ENST00000530199 SPACA7Q96KW9 195 aa9.65□□□□□ -0.86
SVIP-204ENST00000530199 MCOLN1Q9GZU1 580 aa9.65□□□□□ -0.86
SVIP-204ENST00000530199 COPRSQ9NQ92 184 aa9.65□□□□□ -0.86
SVIP-204ENST00000530199 AKAP2Q9Y2D5 859 aa9.65□□□□□ -0.86
SVIP-204ENST00000530199 INPP5FQ9Y2H2 1132 aa9.65□□□□□ -0.86
SVIP-204ENST00000530199 LOC102724428A0A0B4J2F2 783 aa9.64□□□□□ -0.87
SVIP-204ENST00000530199 NFKBIEO00221 500 aa9.64□□□□□ -0.87
SVIP-204ENST00000530199 TRPA1O75762 1119 aa9.64□□□□□ -0.87
SVIP-204ENST00000530199 SIK1P57059 783 aa9.64□□□□□ -0.87
SVIP-204ENST00000530199 VWA5B2Q8N398 1253 aa9.64□□□□□ -0.87
SVIP-204ENST00000530199 IRX2Q9BZI1 471 aaPredicted RBP9.64□□□□□ -0.87
SVIP-204ENST00000530199 PRR12Q9ULL5 1215 aa9.64□□□□□ -0.87
SVIP-204ENST00000530199 PALLDQ8WX93 1383 aa9.63□□□□□ -0.87
SVIP-204ENST00000530199 CDC14CA4D256 554 aa9.63□□□□□ -0.87
SVIP-204ENST00000530199 LMNB1P20700 586 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms