RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 CARMIL2Q6F5E8 1435 aa5.85□□□□□ -1.47
CTR9-205ENST00000529898 BIN1O00499 593 aa5.85□□□□□ -1.47
CTR9-205ENST00000529898 GRK4P32298 578 aa5.85□□□□□ -1.47
CTR9-205ENST00000529898 ETF1P62495 437 aaKnown RBP5.85□□□□□ -1.47
CTR9-205ENST00000529898 RPL6Q02878 288 aaKnown RBP5.85□□□□□ -1.47
CTR9-205ENST00000529898 PSMD2Q13200 908 aa5.85□□□□□ -1.47
CTR9-205ENST00000529898 SEPT6Q14141 434 aa5.85□□□□□ -1.47
CTR9-205ENST00000529898 TSNAXIP1Q2TAA8 658 aa5.85□□□□□ -1.47
CTR9-205ENST00000529898 PHC3Q8NDX5 983 aa5.85□□□□□ -1.47
CTR9-205ENST00000529898 PI4K2BQ8TCG2 481 aa5.85□□□□□ -1.47
CTR9-205ENST00000529898 COX4I2Q96KJ9 171 aa5.85□□□□□ -1.47
CTR9-205ENST00000529898 MIR1-1HGQ9H1L0 117 aa5.85□□□□□ -1.47
CTR9-205ENST00000529898 SEMA3GQ9NS98 782 aa5.85□□□□□ -1.47
CTR9-205ENST00000529898 GNAT3A8MTJ3 354 aa5.84□□□□□ -1.47
CTR9-205ENST00000529898 ITIH2P19823 946 aa5.84□□□□□ -1.47
CTR9-205ENST00000529898 PRAMEF13Q5VWM6 474 aa5.84□□□□□ -1.47
CTR9-205ENST00000529898 SLC6A19Q695T7 634 aa5.84□□□□□ -1.47
CTR9-205ENST00000529898 FLAD1Q8NFF5 587 aa5.84□□□□□ -1.47
CTR9-205ENST00000529898 RIN3Q8TB24 985 aa5.84□□□□□ -1.47
CTR9-205ENST00000529898 CRELD1Q96HD1 420 aa5.84□□□□□ -1.47
CTR9-205ENST00000529898 RSRP1Q9BUV0 290 aa5.84□□□□□ -1.47
CTR9-205ENST00000529898 TJP2Q9UDY2 1190 aa5.84□□□□□ -1.47
CTR9-205ENST00000529898 ADAM30Q9UKF2 790 aa5.84□□□□□ -1.47
CTR9-205ENST00000529898 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.84□□□□□ -1.47
CTR9-205ENST00000529898 FAM221AA4D161 298 aa5.83□□□□□ -1.48
CTR9-205ENST00000529898 YBX3P16989 372 aaKnown RBP eCLIP5.83□□□□□ -1.48
CTR9-205ENST00000529898 XPCQ01831 940 aaPredicted RBP5.83□□□□□ -1.48
CTR9-205ENST00000529898 SFRP5Q5T4F7 317 aa5.83□□□□□ -1.48
CTR9-205ENST00000529898 OGFOD2Q6N063 350 aa5.83□□□□□ -1.48
CTR9-205ENST00000529898 ZNF746Q6NUN9 644 aaPredicted RBP5.83□□□□□ -1.48
CTR9-205ENST00000529898 LETMD1Q6P1Q0 360 aa5.83□□□□□ -1.48
CTR9-205ENST00000529898 MCATQ8IVS2 390 aaKnown RBP5.83□□□□□ -1.48
CTR9-205ENST00000529898 LRRN4CLQ8ND94 238 aa5.83□□□□□ -1.48
CTR9-205ENST00000529898 MIPEPQ99797 713 aa5.83□□□□□ -1.48
CTR9-205ENST00000529898 RC3H2Q9HBD1 1191 aaKnown RBP5.83□□□□□ -1.48
CTR9-205ENST00000529898 ST14Q9Y5Y6 855 aa5.83□□□□□ -1.48
CTR9-205ENST00000529898 CAPN6Q9Y6Q1 641 aa5.83□□□□□ -1.48
CTR9-205ENST00000529898 PRR36Q9H6K5 1346 aa5.82□□□□□ -1.48
CTR9-205ENST00000529898 PRR33A8MZF0 331 aa5.82□□□□□ -1.48
CTR9-205ENST00000529898 SORBS3O60504 671 aa5.82□□□□□ -1.48
CTR9-205ENST00000529898 CILPO75339 1184 aa5.82□□□□□ -1.48
CTR9-205ENST00000529898 LMNB1P20700 586 aa5.82□□□□□ -1.48
CTR9-205ENST00000529898 LMNB2Q03252 620 aa5.82□□□□□ -1.48
CTR9-205ENST00000529898 MAP3K11Q16584 847 aa5.82□□□□□ -1.48
CTR9-205ENST00000529898 TMEM201Q5SNT2 666 aa5.82□□□□□ -1.48
CTR9-205ENST00000529898 THAP5Q7Z6K1 395 aa5.82□□□□□ -1.48
CTR9-205ENST00000529898 MFSD4AQ8N468 514 aa5.82□□□□□ -1.48
CTR9-205ENST00000529898 TMEM87BQ96K49 555 aa5.82□□□□□ -1.48
CTR9-205ENST00000529898 RHOVQ96L33 236 aa5.82□□□□□ -1.48
CTR9-205ENST00000529898 TLR6Q9Y2C9 796 aa5.82□□□□□ -1.48
CTR9-205ENST00000529898 ZEB1P37275 1124 aaPredicted RBP5.81□□□□□ -1.48
CTR9-205ENST00000529898 KIR3DL1P43629 444 aa5.81□□□□□ -1.48
CTR9-205ENST00000529898 TAGLNQ01995 201 aaKnown RBP5.81□□□□□ -1.48
CTR9-205ENST00000529898 PDE4BQ07343 736 aa5.81□□□□□ -1.48
CTR9-205ENST00000529898 CAMK2GQ13555 558 aaPredicted RBP5.81□□□□□ -1.48
CTR9-205ENST00000529898 HOMEZQ8IX15 550 aa5.81□□□□□ -1.48
CTR9-205ENST00000529898 DNAJB8Q8NHS0 232 aa5.81□□□□□ -1.48
CTR9-205ENST00000529898 TMEM40Q8WWA1 233 aa5.81□□□□□ -1.48
CTR9-205ENST00000529898 HSPA12BQ96MM6 686 aa5.81□□□□□ -1.48
CTR9-205ENST00000529898 FAM161BQ96MY7 647 aa5.81□□□□□ -1.48
CTR9-205ENST00000529898 KRTAP9-9Q9BYP9 154 aa5.81□□□□□ -1.48
CTR9-205ENST00000529898 KRTAP9-4Q9BYQ2 154 aa5.81□□□□□ -1.48
CTR9-205ENST00000529898 PGRP06401 933 aa5.8□□□□□ -1.48
CTR9-205ENST00000529898 CYP7A1P22680 504 aa5.8□□□□□ -1.48
CTR9-205ENST00000529898 ZP2Q05996 745 aa5.8□□□□□ -1.48
CTR9-205ENST00000529898 CCDC27Q2M243 656 aa5.8□□□□□ -1.48
CTR9-205ENST00000529898 PIWIL2Q8TC59 973 aaKnown RBP5.8□□□□□ -1.48
CTR9-205ENST00000529898 GATAD2BQ8WXI9 593 aa5.8□□□□□ -1.48
CTR9-205ENST00000529898 ACSF2Q96CM8 615 aaPredicted RBP5.8□□□□□ -1.48
CTR9-205ENST00000529898 KCNQ5Q9NR82 932 aa5.8□□□□□ -1.48
CTR9-205ENST00000529898 TPX2Q9ULW0 747 aaKnown RBP5.8□□□□□ -1.48
CTR9-205ENST00000529898 ITGAEP38570 1179 aa5.79□□□□□ -1.48
CTR9-205ENST00000529898 IKZF1Q13422 519 aa5.79□□□□□ -1.48
CTR9-205ENST00000529898 PPP1R13LQ8WUF5 828 aa5.79□□□□□ -1.48
CTR9-205ENST00000529898 TMEM74Q96NL1 305 aa5.79□□□□□ -1.48
CTR9-205ENST00000529898 PODXL2Q9NZ53 605 aa5.79□□□□□ -1.48
CTR9-205ENST00000529898 CEP131Q9UPN4 1083 aa5.79□□□□□ -1.48
CTR9-205ENST00000529898 CTNND2Q9UQB3 1225 aa5.79□□□□□ -1.48
CTR9-205ENST00000529898 FAM155AB1AL88 458 aaPredicted RBP5.78□□□□□ -1.48
CTR9-205ENST00000529898 PF4P02776 101 aa5.78□□□□□ -1.48
CTR9-205ENST00000529898 GARTP22102 1010 aa5.78□□□□□ -1.48
CTR9-205ENST00000529898 TNK2Q07912 1038 aa5.78□□□□□ -1.48
CTR9-205ENST00000529898 PWP1Q13610 501 aa5.78□□□□□ -1.48
CTR9-205ENST00000529898 ERICH6BQ5W0A0 696 aa5.78□□□□□ -1.48
CTR9-205ENST00000529898 BNC2Q6ZN30 1099 aaPredicted RBP5.78□□□□□ -1.48
CTR9-205ENST00000529898 CDH24Q86UP0 819 aa5.78□□□□□ -1.48
CTR9-205ENST00000529898 FAM168AQ92567 244 aa5.78□□□□□ -1.48
CTR9-205ENST00000529898 JARID2Q92833 1246 aaPredicted RBP5.78□□□□□ -1.48
CTR9-205ENST00000529898 GZF1Q9H116 711 aaPredicted RBP5.78□□□□□ -1.48
CTR9-205ENST00000529898 ATP13A1Q9HD20 1204 aa5.78□□□□□ -1.48
CTR9-205ENST00000529898 F13A1P00488 732 aa5.77□□□□□ -1.49
CTR9-205ENST00000529898 SRFP11831 508 aa5.77□□□□□ -1.49
CTR9-205ENST00000529898 ETV3P41162 512 aa5.77□□□□□ -1.49
CTR9-205ENST00000529898 DIEXFQ68CQ4 756 aaKnown RBP5.77□□□□□ -1.49
CTR9-205ENST00000529898 ERMP1Q7Z2K6 904 aa5.77□□□□□ -1.49
CTR9-205ENST00000529898 RELL1Q8IUW5 271 aa5.77□□□□□ -1.49
CTR9-205ENST00000529898 SLFN12Q8IYM2 578 aa5.77□□□□□ -1.49
CTR9-205ENST00000529898 CYB5D2Q8WUJ1 264 aa5.77□□□□□ -1.49
CTR9-205ENST00000529898 Q96M66 194 aa5.77□□□□□ -1.49
CTR9-205ENST00000529898 PRDM7Q9NQW5 492 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms