RNA–Protein interactions for RNA: ENST00000529724.1

PPP1CA-206, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 2

Gene PPP1CA, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-206ENST00000529724 KIAA0355O15063 1070 aa13.22□□□□□ -0.29
PPP1CA-206ENST00000529724 RRP1BQ14684 758 aaKnown RBP13.22□□□□□ -0.29
PPP1CA-206ENST00000529724 LRRC24Q50LG9 513 aa13.22□□□□□ -0.29
PPP1CA-206ENST00000529724 WDR66Q8TBY9 1149 aa13.22□□□□□ -0.29
PPP1CA-206ENST00000529724 EDC3Q96F86 508 aaKnown RBP13.22□□□□□ -0.29
PPP1CA-206ENST00000529724 TACC3Q9Y6A5 838 aa13.22□□□□□ -0.29
PPP1CA-206ENST00000529724 KIF16BQ96L93 1317 aa13.21□□□□□ -0.29
PPP1CA-206ENST00000529724 KBTBD13C9JR72 458 aa13.21□□□□□ -0.29
PPP1CA-206ENST00000529724 TBC1D12O60347 775 aa13.21□□□□□ -0.29
PPP1CA-206ENST00000529724 PDE8BO95263 885 aa13.21□□□□□ -0.29
PPP1CA-206ENST00000529724 CLTBP09497 229 aa13.21□□□□□ -0.29
PPP1CA-206ENST00000529724 CYBAP13498 195 aa13.21□□□□□ -0.29
PPP1CA-206ENST00000529724 CYP2C19P33261 490 aa13.21□□□□□ -0.29
PPP1CA-206ENST00000529724 ADCYAP1R1P41586 468 aa13.21□□□□□ -0.29
PPP1CA-206ENST00000529724 FKBP5Q13451 457 aaPredicted RBP13.21□□□□□ -0.29
PPP1CA-206ENST00000529724 BEND3Q5T5X7 828 aa13.21□□□□□ -0.29
PPP1CA-206ENST00000529724 RASIP1Q5U651 963 aa13.21□□□□□ -0.29
PPP1CA-206ENST00000529724 ARRDC4Q8NCT1 418 aa13.21□□□□□ -0.29
PPP1CA-206ENST00000529724 FERMT2Q96AC1 680 aa13.21□□□□□ -0.29
PPP1CA-206ENST00000529724 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.21□□□□□ -0.29
PPP1CA-206ENST00000529724 TBC1D2Q9BYX2 928 aa13.21□□□□□ -0.29
PPP1CA-206ENST00000529724 GAKO14976 1311 aa13.2□□□□□ -0.3
PPP1CA-206ENST00000529724 HOXC6P09630 235 aa13.2□□□□□ -0.3
PPP1CA-206ENST00000529724 RAG1P15918 1043 aa13.2□□□□□ -0.3
PPP1CA-206ENST00000529724 FGFR2P21802 821 aa13.2□□□□□ -0.3
PPP1CA-206ENST00000529724 AAK1Q2M2I8 961 aa13.2□□□□□ -0.3
PPP1CA-206ENST00000529724 METTL24Q5JXM2 366 aa13.2□□□□□ -0.3
PPP1CA-206ENST00000529724 ANO1Q5XXA6 986 aa13.2□□□□□ -0.3
PPP1CA-206ENST00000529724 NPLOC4Q8TAT6 608 aa13.2□□□□□ -0.3
PPP1CA-206ENST00000529724 KAZALD1Q96I82 304 aa13.2□□□□□ -0.3
PPP1CA-206ENST00000529724 OSBPL5Q9H0X9 879 aaPredicted RBP13.2□□□□□ -0.3
PPP1CA-206ENST00000529724 TSPYL2Q9H2G4 693 aaPredicted RBP13.2□□□□□ -0.3
PPP1CA-206ENST00000529724 PRRC2BQ5JSZ5 2229 aaKnown RBP13.2□□□□□ -0.3
PPP1CA-206ENST00000529724 ZDBF2Q9HCK1 2354 aa13.2□□□□□ -0.3
PPP1CA-206ENST00000529724 MYBBP1AQ9BQG0 1328 aaKnown RBP13.19□□□□□ -0.3
PPP1CA-206ENST00000529724 ATAD5Q96QE3 1844 aa13.19□□□□□ -0.3
PPP1CA-206ENST00000529724 USP17L5A8MUK1 530 aa13.19□□□□□ -0.3
PPP1CA-206ENST00000529724 GRM8O00222 908 aa13.19□□□□□ -0.3
PPP1CA-206ENST00000529724 ERC2O15083 957 aa13.19□□□□□ -0.3
PPP1CA-206ENST00000529724 NHLH1Q02575 133 aa13.19□□□□□ -0.3
PPP1CA-206ENST00000529724 CALD1Q05682 793 aaKnown RBP13.19□□□□□ -0.3
PPP1CA-206ENST00000529724 MTMR2Q13614 643 aa13.19□□□□□ -0.3
PPP1CA-206ENST00000529724 CCAR1Q8IX12 1150 aaKnown RBP13.19□□□□□ -0.3
PPP1CA-206ENST00000529724 PAGR1Q9BTK6 254 aa13.19□□□□□ -0.3
PPP1CA-206ENST00000529724 ADAMTS8Q9UP79 889 aa13.19□□□□□ -0.3
PPP1CA-206ENST00000529724 NDUFB9Q9Y6M9 179 aa13.19□□□□□ -0.3
PPP1CA-206ENST00000529724 MYH13Q9UKX3 1938 aa13.19□□□□□ -0.3
PPP1CA-206ENST00000529724 F6X3S4 739 aa13.18□□□□□ -0.3
PPP1CA-206ENST00000529724 SMIM22K7EJ46 135 aa13.18□□□□□ -0.3
PPP1CA-206ENST00000529724 CNMDO75829 334 aa13.18□□□□□ -0.3
PPP1CA-206ENST00000529724 LDHBP07195 334 aaKnown RBP13.18□□□□□ -0.3
PPP1CA-206ENST00000529724 ZEB1P37275 1124 aaPredicted RBP13.18□□□□□ -0.3
PPP1CA-206ENST00000529724 CAP2P40123 477 aa13.18□□□□□ -0.3
PPP1CA-206ENST00000529724 BACE1P56817 501 aa13.18□□□□□ -0.3
PPP1CA-206ENST00000529724 ATP2B2Q01814 1243 aa13.18□□□□□ -0.3
PPP1CA-206ENST00000529724 PICALMQ13492 652 aa13.18□□□□□ -0.3
PPP1CA-206ENST00000529724 LRRC41Q15345 812 aa13.18□□□□□ -0.3
PPP1CA-206ENST00000529724 CCDC129Q6ZRS4 1044 aa13.18□□□□□ -0.3
PPP1CA-206ENST00000529724 C16orf59Q7L2K0 433 aa13.18□□□□□ -0.3
PPP1CA-206ENST00000529724 TSR2Q969E8 191 aaKnown RBP13.18□□□□□ -0.3
PPP1CA-206ENST00000529724 WDR18Q9BV38 432 aa13.18□□□□□ -0.3
PPP1CA-206ENST00000529724 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.18□□□□□ -0.3
PPP1CA-206ENST00000529724 SLC15A5A6NIM6 579 aa13.17□□□□□ -0.3
PPP1CA-206ENST00000529724 PI4K2BG5E9Z4 385 aa13.17□□□□□ -0.3
PPP1CA-206ENST00000529724 TLL1O43897 1013 aa13.17□□□□□ -0.3
PPP1CA-206ENST00000529724 PTPREP23469 700 aa13.17□□□□□ -0.3
PPP1CA-206ENST00000529724 GRB14Q14449 540 aa13.17□□□□□ -0.3
PPP1CA-206ENST00000529724 TMEM240Q5SV17 173 aa13.17□□□□□ -0.3
PPP1CA-206ENST00000529724 SUCLG2Q96I99 432 aa13.17□□□□□ -0.3
PPP1CA-206ENST00000529724 PHF24Q9UPV7 400 aa13.17□□□□□ -0.3
PPP1CA-206ENST00000529724 TRANK1O15050 2925 aa13.17□□□□□ -0.3
PPP1CA-206ENST00000529724 WDFY4Q6ZS81 3184 aa13.17□□□□□ -0.3
PPP1CA-206ENST00000529724 LRRC37A2A6NM11 1700 aa13.16□□□□□ -0.3
PPP1CA-206ENST00000529724 SALL1Q9NSC2 1324 aa13.16□□□□□ -0.3
PPP1CA-206ENST00000529724 BRWD1Q9NSI6 2320 aa13.16□□□□□ -0.3
PPP1CA-206ENST00000529724 MYH2Q9UKX2 1941 aa13.16□□□□□ -0.3
PPP1CA-206ENST00000529724 MYCNP04198 464 aaPredicted RBP13.16□□□□□ -0.3
PPP1CA-206ENST00000529724 IFIT1P09914 478 aaKnown RBP13.16□□□□□ -0.3
PPP1CA-206ENST00000529724 PUM3Q15397 648 aaKnown RBP13.16□□□□□ -0.3
PPP1CA-206ENST00000529724 TWISTNBQ3B726 338 aaPredicted RBP13.16□□□□□ -0.3
PPP1CA-206ENST00000529724 MICALL1Q8N3F8 863 aa13.16□□□□□ -0.3
PPP1CA-206ENST00000529724 GTF3C2Q8WUA4 911 aaPredicted RBP13.16□□□□□ -0.3
PPP1CA-206ENST00000529724 NKX2-4Q9H2Z4 354 aa13.16□□□□□ -0.3
PPP1CA-206ENST00000529724 AS3MTQ9HBK9 375 aa13.16□□□□□ -0.3
PPP1CA-206ENST00000529724 TMOD4Q9NZQ9 345 aa13.16□□□□□ -0.3
PPP1CA-206ENST00000529724 PRR33A8MZF0 331 aa13.15□□□□□ -0.3
PPP1CA-206ENST00000529724 SEPT4O43236 478 aa13.15□□□□□ -0.3
PPP1CA-206ENST00000529724 PQBP1O60828 265 aaKnown RBP13.15□□□□□ -0.3
PPP1CA-206ENST00000529724 GLRX3O76003 335 aaKnown RBP13.15□□□□□ -0.3
PPP1CA-206ENST00000529724 JAG1P78504 1218 aa13.15□□□□□ -0.3
PPP1CA-206ENST00000529724 FAAP100Q0VG06 881 aa13.15□□□□□ -0.3
PPP1CA-206ENST00000529724 FAM47AQ5JRC9 791 aa13.15□□□□□ -0.3
PPP1CA-206ENST00000529724 CWC22Q9HCG8 908 aaKnown RBP13.15□□□□□ -0.3
PPP1CA-206ENST00000529724 CD320Q9NPF0 282 aa13.15□□□□□ -0.3
PPP1CA-206ENST00000529724 TMEM39AQ9NV64 488 aa13.15□□□□□ -0.3
PPP1CA-206ENST00000529724 YBX2Q9Y2T7 364 aaKnown RBP13.15□□□□□ -0.3
PPP1CA-206ENST00000529724 APAF1O14727 1248 aa13.14□□□□□ -0.31
PPP1CA-206ENST00000529724 RHBDL3P58872 404 aa13.14□□□□□ -0.31
PPP1CA-206ENST00000529724 WDR43Q15061 677 aaKnown RBP eCLIP13.14□□□□□ -0.31
PPP1CA-206ENST00000529724 RAB30Q15771 203 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms