RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 RFX7Q2KHR2 1363 aa11.14□□□□□ -0.63
VPS11-203ENST00000529545 MROH7-TTC4A0A0A0MT08 1334 aa11.13□□□□□ -0.63
VPS11-203ENST00000529545 PDS5AQ29RF7 1337 aaKnown RBP11.13□□□□□ -0.63
VPS11-203ENST00000529545 DDX60LQ5H9U9 1706 aaKnown RBP11.13□□□□□ -0.63
VPS11-203ENST00000529545 USP17L5A8MUK1 530 aa11.13□□□□□ -0.63
VPS11-203ENST00000529545 MAP4K4O95819 1239 aaPredicted RBP11.13□□□□□ -0.63
VPS11-203ENST00000529545 SLURP2P0DP57 97 aa11.13□□□□□ -0.63
VPS11-203ENST00000529545 CYP2B6P20813 491 aa11.13□□□□□ -0.63
VPS11-203ENST00000529545 IRX3P78415 501 aaPredicted RBP11.13□□□□□ -0.63
VPS11-203ENST00000529545 GSTO1P78417 241 aa11.13□□□□□ -0.63
VPS11-203ENST00000529545 TRMT44Q8IYL2 757 aaKnown RBP11.13□□□□□ -0.63
VPS11-203ENST00000529545 FAM9BQ8IZU0 186 aa11.13□□□□□ -0.63
VPS11-203ENST00000529545 NUDT12Q9BQG2 462 aa11.13□□□□□ -0.63
VPS11-203ENST00000529545 MTMR10Q9NXD2 777 aa11.13□□□□□ -0.63
VPS11-203ENST00000529545 GJD2Q9UKL4 321 aa11.13□□□□□ -0.63
VPS11-203ENST00000529545 OGDHLQ9ULD0 1010 aa11.13□□□□□ -0.63
VPS11-203ENST00000529545 GPR75-ASB3A0A0A6YYF3 556 aa11.12□□□□□ -0.63
VPS11-203ENST00000529545 ADORA1P30542 326 aa11.12□□□□□ -0.63
VPS11-203ENST00000529545 CAP2P40123 477 aa11.12□□□□□ -0.63
VPS11-203ENST00000529545 TRIM32Q13049 653 aa11.12□□□□□ -0.63
VPS11-203ENST00000529545 RASGRF1Q13972 1273 aa11.12□□□□□ -0.63
VPS11-203ENST00000529545 PDE3AQ14432 1141 aa11.12□□□□□ -0.63
VPS11-203ENST00000529545 MVPQ14764 893 aaKnown RBP11.12□□□□□ -0.63
VPS11-203ENST00000529545 SOCS4Q8WXH5 440 aa11.12□□□□□ -0.63
VPS11-203ENST00000529545 SSH1Q8WYL5 1049 aa11.12□□□□□ -0.63
VPS11-203ENST00000529545 NOL10Q9BSC4 688 aaKnown RBP11.12□□□□□ -0.63
VPS11-203ENST00000529545 TMOD4Q9NZQ9 345 aa11.12□□□□□ -0.63
VPS11-203ENST00000529545 MORF4L1Q9UBU8 362 aa11.12□□□□□ -0.63
VPS11-203ENST00000529545 AKAP2Q9Y2D5 859 aa11.12□□□□□ -0.63
VPS11-203ENST00000529545 LOC285556D6RIA3 1793 aa11.12□□□□□ -0.63
VPS11-203ENST00000529545 ATAD5Q96QE3 1844 aa11.12□□□□□ -0.63
VPS11-203ENST00000529545 CUL9Q8IWT3 2517 aa11.11□□□□□ -0.63
VPS11-203ENST00000529545 FAM196BA6NMK8 535 aa11.11□□□□□ -0.63
VPS11-203ENST00000529545 XRCC5P13010 732 aaKnown RBP11.11□□□□□ -0.63
VPS11-203ENST00000529545 ZKSCAN1P17029 563 aaPredicted RBP11.11□□□□□ -0.63
VPS11-203ENST00000529545 TIMM10P62072 90 aa11.11□□□□□ -0.63
VPS11-203ENST00000529545 MECOMQ03112 1051 aa11.11□□□□□ -0.63
VPS11-203ENST00000529545 SH3D19Q5HYK7 790 aa11.11□□□□□ -0.63
VPS11-203ENST00000529545 GORABQ5T7V8 394 aa11.11□□□□□ -0.63
VPS11-203ENST00000529545 GPRC5AQ8NFJ5 357 aa11.11□□□□□ -0.63
VPS11-203ENST00000529545 TRIB2Q92519 343 aa11.11□□□□□ -0.63
VPS11-203ENST00000529545 CWC22Q9HCG8 908 aaKnown RBP11.11□□□□□ -0.63
VPS11-203ENST00000529545 HERC5Q9UII4 1024 aaKnown RBP11.11□□□□□ -0.63
VPS11-203ENST00000529545 E9PSI1 815 aa11.1□□□□□ -0.63
VPS11-203ENST00000529545 SNPHO15079 494 aa11.1□□□□□ -0.63
VPS11-203ENST00000529545 MAPK4P31152 587 aa11.1□□□□□ -0.63
VPS11-203ENST00000529545 RHBDL3P58872 404 aa11.1□□□□□ -0.63
VPS11-203ENST00000529545 ALDH1L2Q3SY69 923 aa11.1□□□□□ -0.63
VPS11-203ENST00000529545 MAP3K21Q5TCX8 1036 aa11.1□□□□□ -0.63
VPS11-203ENST00000529545 XAGE2Q96GT9 111 aa11.1□□□□□ -0.63
VPS11-203ENST00000529545 NEUROD6Q96NK8 337 aa11.1□□□□□ -0.63
VPS11-203ENST00000529545 LBHD1Q9BQE6 289 aaPredicted RBP11.1□□□□□ -0.63
VPS11-203ENST00000529545 TRIM34Q9BYJ4 488 aa11.1□□□□□ -0.63
VPS11-203ENST00000529545 COPRSQ9NQ92 184 aa11.1□□□□□ -0.63
VPS11-203ENST00000529545 SMC4Q9NTJ3 1288 aa11.1□□□□□ -0.63
VPS11-203ENST00000529545 RAI14Q9P0K7 980 aa11.1□□□□□ -0.63
VPS11-203ENST00000529545 PA2G4Q9UQ80 394 aaKnown RBP11.1□□□□□ -0.63
VPS11-203ENST00000529545 COL2A1P02458 1487 aaPredicted RBP11.1□□□□□ -0.63
VPS11-203ENST00000529545 A0A1B0GUL7 405 aa11.09□□□□□ -0.63
VPS11-203ENST00000529545 C19orf81C9J6K1 198 aa11.09□□□□□ -0.63
VPS11-203ENST00000529545 ASNSP08243 561 aa11.09□□□□□ -0.63
VPS11-203ENST00000529545 HOXA7P31268 230 aaPredicted RBP11.09□□□□□ -0.63
VPS11-203ENST00000529545 RGS2P41220 211 aa11.09□□□□□ -0.63
VPS11-203ENST00000529545 BACE1P56817 501 aa11.09□□□□□ -0.63
VPS11-203ENST00000529545 MTMR2Q13614 643 aa11.09□□□□□ -0.63
VPS11-203ENST00000529545 TEX11Q8IYF3 940 aa11.09□□□□□ -0.63
VPS11-203ENST00000529545 GTF3C2Q8WUA4 911 aaPredicted RBP11.09□□□□□ -0.63
VPS11-203ENST00000529545 P2RX7Q99572 595 aaKnown RBP11.09□□□□□ -0.63
VPS11-203ENST00000529545 WDR18Q9BV38 432 aa11.09□□□□□ -0.63
VPS11-203ENST00000529545 DHX36Q9H2U1 1008 aaKnown RBP11.09□□□□□ -0.63
VPS11-203ENST00000529545 PI4KBQ9UBF8 816 aa11.09□□□□□ -0.63
VPS11-203ENST00000529545 COL6A3P12111 3177 aa11.09□□□□□ -0.63
VPS11-203ENST00000529545 PFASO15067 1338 aa11.09□□□□□ -0.63
VPS11-203ENST00000529545 PLXNB2O15031 1838 aa11.08□□□□□ -0.64
VPS11-203ENST00000529545 BAG3O95817 575 aa11.08□□□□□ -0.64
VPS11-203ENST00000529545 HERVK_113P62684 666 aa11.08□□□□□ -0.64
VPS11-203ENST00000529545 MDM2Q00987 491 aaPredicted RBP11.08□□□□□ -0.64
VPS11-203ENST00000529545 CACNB2Q08289 660 aaPredicted RBP11.08□□□□□ -0.64
VPS11-203ENST00000529545 FAM109BQ6ICB4 259 aaPredicted RBP11.08□□□□□ -0.64
VPS11-203ENST00000529545 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.08□□□□□ -0.64
VPS11-203ENST00000529545 CRACR2BQ8N4Y2 399 aaPredicted RBP11.08□□□□□ -0.64
VPS11-203ENST00000529545 SPATA5Q8NB90 893 aa11.08□□□□□ -0.64
VPS11-203ENST00000529545 NSUN4Q96CB9 384 aaKnown RBP11.08□□□□□ -0.64
VPS11-203ENST00000529545 COL25A1Q9BXS0 654 aaPredicted RBP11.08□□□□□ -0.64
VPS11-203ENST00000529545 LRP2BPQ9P2M1 347 aa11.08□□□□□ -0.64
VPS11-203ENST00000529545 PRKAG2Q9UGJ0 569 aa11.08□□□□□ -0.64
VPS11-203ENST00000529545 ZNF521Q96K83 1311 aa11.08□□□□□ -0.64
VPS11-203ENST00000529545 A0A0C4DFX4 3053 aa11.07□□□□□ -0.64
VPS11-203ENST00000529545 USP17L10C9JJH3 530 aa11.07□□□□□ -0.64
VPS11-203ENST00000529545 GLRX3O76003 335 aaKnown RBP11.07□□□□□ -0.64
VPS11-203ENST00000529545 COL6A1P12109 1028 aa11.07□□□□□ -0.64
VPS11-203ENST00000529545 TFCP2Q12800 502 aa11.07□□□□□ -0.64
VPS11-203ENST00000529545 LRRC26Q2I0M4 334 aa11.07□□□□□ -0.64
VPS11-203ENST00000529545 PLEKHH3Q7Z736 793 aa11.07□□□□□ -0.64
VPS11-203ENST00000529545 FOXP4Q8IVH2 680 aaPredicted RBP11.07□□□□□ -0.64
VPS11-203ENST00000529545 PAGR1Q9BTK6 254 aa11.07□□□□□ -0.64
VPS11-203ENST00000529545 TMEM121BQ9BXQ6 578 aaPredicted RBP11.07□□□□□ -0.64
VPS11-203ENST00000529545 API5Q9BZZ5 524 aaKnown RBP11.07□□□□□ -0.64
VPS11-203ENST00000529545 GINM1Q9NU53 330 aa11.07□□□□□ -0.64
VPS11-203ENST00000529545 HMG20BQ9P0W2 317 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms