RNA–Protein interactions for RNA: ENST00000529529.1

TRIM3-209, Transcript of tripartite motif containing 3, humanhuman

TSL 4

Gene TRIM3, Length 785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-209ENST00000529529 COA7Q96BR5 231 aa19.65■□□□□ 0.74
TRIM3-209ENST00000529529 DNAJC2Q99543 621 aaKnown RBP19.65■□□□□ 0.74
TRIM3-209ENST00000529529 RNF208Q9H0X6 261 aa19.65■□□□□ 0.74
TRIM3-209ENST00000529529 GINM1Q9NU53 330 aa19.65■□□□□ 0.74
TRIM3-209ENST00000529529 ZBTB21Q9ULJ3 1066 aa19.65■□□□□ 0.74
TRIM3-209ENST00000529529 MAST2Q6P0Q8 1798 aa19.65■□□□□ 0.74
TRIM3-209ENST00000529529 KIAA0100Q14667 2235 aaKnown RBP19.64■□□□□ 0.74
TRIM3-209ENST00000529529 MAGEB6P1A0A0J9YX57 407 aa19.64■□□□□ 0.73
TRIM3-209ENST00000529529 USP17L10C9JJH3 530 aa19.64■□□□□ 0.73
TRIM3-209ENST00000529529 GOLIM4O00461 696 aa19.64■□□□□ 0.73
TRIM3-209ENST00000529529 FAM110CQ1W6H9 321 aa19.64■□□□□ 0.73
TRIM3-209ENST00000529529 TTC6Q86TZ1 520 aa19.64■□□□□ 0.73
TRIM3-209ENST00000529529 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.64■□□□□ 0.73
TRIM3-209ENST00000529529 RIOK1Q9BRS2 568 aaKnown RBP19.64■□□□□ 0.73
TRIM3-209ENST00000529529 RBBP6Q7Z6E9 1792 aaKnown RBP19.64■□□□□ 0.73
TRIM3-209ENST00000529529 MYO5AQ9Y4I1 1855 aaKnown RBP19.64■□□□□ 0.73
TRIM3-209ENST00000529529 ELNP15502 786 aa19.63■□□□□ 0.73
TRIM3-209ENST00000529529 PDE6AP16499 860 aa19.63■□□□□ 0.73
TRIM3-209ENST00000529529 C20orf194Q5TEA3 1177 aa19.63■□□□□ 0.73
TRIM3-209ENST00000529529 TATDN1Q6P1N9 297 aa19.63■□□□□ 0.73
TRIM3-209ENST00000529529 NKX2-3Q8TAU0 364 aa19.63■□□□□ 0.73
TRIM3-209ENST00000529529 P2RX7Q99572 595 aaKnown RBP19.63■□□□□ 0.73
TRIM3-209ENST00000529529 SERPINB13Q9UIV8 391 aa19.63■□□□□ 0.73
TRIM3-209ENST00000529529 TAOK2Q9UL54 1235 aa19.63■□□□□ 0.73
TRIM3-209ENST00000529529 GH2P01242 217 aa19.62■□□□□ 0.73
TRIM3-209ENST00000529529 GJB1P08034 283 aa19.62■□□□□ 0.73
TRIM3-209ENST00000529529 HOXA7P31268 230 aaPredicted RBP19.62■□□□□ 0.73
TRIM3-209ENST00000529529 IRX3P78415 501 aaPredicted RBP19.62■□□□□ 0.73
TRIM3-209ENST00000529529 IRF5Q13568 498 aa19.62■□□□□ 0.73
TRIM3-209ENST00000529529 PDE3AQ14432 1141 aa19.62■□□□□ 0.73
TRIM3-209ENST00000529529 EHD4Q9H223 541 aa19.62■□□□□ 0.73
TRIM3-209ENST00000529529 PTPRFP10586 1907 aa19.61■□□□□ 0.73
TRIM3-209ENST00000529529 ZNF532Q9HCE3 1301 aa19.61■□□□□ 0.73
TRIM3-209ENST00000529529 POLR3DP05423 398 aaPredicted RBP19.61■□□□□ 0.73
TRIM3-209ENST00000529529 GJA8P48165 433 aa19.61■□□□□ 0.73
TRIM3-209ENST00000529529 PXYLP1Q8TE99 480 aa19.61■□□□□ 0.73
TRIM3-209ENST00000529529 EDC3Q96F86 508 aaKnown RBP19.61■□□□□ 0.73
TRIM3-209ENST00000529529 CRNKL1Q9BZJ0 848 aaKnown RBP19.61■□□□□ 0.73
TRIM3-209ENST00000529529 UNC93B1Q9H1C4 597 aa19.61■□□□□ 0.73
TRIM3-209ENST00000529529 SIPA1L1O43166 1804 aa19.6■□□□□ 0.73
TRIM3-209ENST00000529529 PLCD1P51178 756 aa19.6■□□□□ 0.73
TRIM3-209ENST00000529529 CERKLQ49MI3 558 aaPredicted RBP19.6■□□□□ 0.73
TRIM3-209ENST00000529529 USP17L2Q6R6M4 530 aa19.6■□□□□ 0.73
TRIM3-209ENST00000529529 GCC1Q96CN9 775 aa19.6■□□□□ 0.73
TRIM3-209ENST00000529529 SHISA4Q96DD7 197 aa19.6■□□□□ 0.73
TRIM3-209ENST00000529529 BOLA2Q9H3K6 86 aa19.6■□□□□ 0.73
TRIM3-209ENST00000529529 EMILIN3Q9NT22 766 aa19.6■□□□□ 0.73
TRIM3-209ENST00000529529 MORF4L1Q9UBU8 362 aa19.6■□□□□ 0.73
TRIM3-209ENST00000529529 INHAP05111 366 aa19.59■□□□□ 0.73
TRIM3-209ENST00000529529 ATP5JP18859 108 aa19.59■□□□□ 0.73
TRIM3-209ENST00000529529 RAB3GAP1Q15042 981 aa19.59■□□□□ 0.73
TRIM3-209ENST00000529529 ABCB5Q2M3G0 1257 aa19.59■□□□□ 0.73
TRIM3-209ENST00000529529 U2AF1L4Q8WU68 220 aaKnown RBP19.59■□□□□ 0.73
TRIM3-209ENST00000529529 PAG1Q9NWQ8 432 aa19.59■□□□□ 0.73
TRIM3-209ENST00000529529 ATAD5Q96QE3 1844 aa19.59■□□□□ 0.73
TRIM3-209ENST00000529529 TCRBV5S4A2TA0A5A2 114 aa19.58■□□□□ 0.72
TRIM3-209ENST00000529529 PEX10O60683 326 aa19.58■□□□□ 0.72
TRIM3-209ENST00000529529 HERVK_113P62684 666 aa19.58■□□□□ 0.72
TRIM3-209ENST00000529529 GPRC5AQ8NFJ5 357 aa19.58■□□□□ 0.72
TRIM3-209ENST00000529529 CABP5Q9NP86 173 aa19.58■□□□□ 0.72
TRIM3-209ENST00000529529 MCM9Q9NXL9 1143 aa19.58■□□□□ 0.72
TRIM3-209ENST00000529529 GJD2Q9UKL4 321 aa19.58■□□□□ 0.72
TRIM3-209ENST00000529529 CDK5RAP2Q96SN8 1893 aa19.58■□□□□ 0.72
TRIM3-209ENST00000529529 MGAMO43451 1857 aa19.57■□□□□ 0.72
TRIM3-209ENST00000529529 SGPL1O95470 568 aa19.57■□□□□ 0.72
TRIM3-209ENST00000529529 ZYXQ15942 572 aaKnown RBP19.57■□□□□ 0.72
TRIM3-209ENST00000529529 LCORLQ8N3X6 602 aa19.57■□□□□ 0.72
TRIM3-209ENST00000529529 SDR42E1Q8WUS8 393 aa19.57■□□□□ 0.72
TRIM3-209ENST00000529529 LRRCC1Q9C099 1032 aa19.57■□□□□ 0.72
TRIM3-209ENST00000529529 ARMT1Q9H993 441 aa19.57■□□□□ 0.72
TRIM3-209ENST00000529529 TXNRD2Q9NNW7 524 aa19.57■□□□□ 0.72
TRIM3-209ENST00000529529 RBPJLQ9UBG7 517 aa19.57■□□□□ 0.72
TRIM3-209ENST00000529529 FOCADQ5VW36 1801 aa19.57■□□□□ 0.72
TRIM3-209ENST00000529529 LOC285556D6RIA3 1793 aa19.57■□□□□ 0.72
TRIM3-209ENST00000529529 SHMT1P34896 483 aa19.56■□□□□ 0.72
TRIM3-209ENST00000529529 SLFNL1Q499Z3 407 aa19.56■□□□□ 0.72
TRIM3-209ENST00000529529 DPF3Q92784 378 aa19.56■□□□□ 0.72
TRIM3-209ENST00000529529 FEZ1Q99689 392 aa19.56■□□□□ 0.72
TRIM3-209ENST00000529529 HAUS7Q99871 368 aa19.56■□□□□ 0.72
TRIM3-209ENST00000529529 SMARCA5O60264 1052 aaPredicted RBP19.55■□□□□ 0.72
TRIM3-209ENST00000529529 TFRCP02786 760 aaKnown RBP19.55■□□□□ 0.72
TRIM3-209ENST00000529529 USP14P54578 494 aa19.55■□□□□ 0.72
TRIM3-209ENST00000529529 EVX2Q03828 476 aa19.55■□□□□ 0.72
TRIM3-209ENST00000529529 Q3C1V9 767 aa19.55■□□□□ 0.72
TRIM3-209ENST00000529529 ACER1Q8TDN7 264 aa19.55■□□□□ 0.72
TRIM3-209ENST00000529529 DEFB118Q96PH6 123 aa19.55■□□□□ 0.72
TRIM3-209ENST00000529529 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.55■□□□□ 0.72
TRIM3-209ENST00000529529 DCP1AQ9NPI6 582 aaPredicted RBP19.55■□□□□ 0.72
TRIM3-209ENST00000529529 BRCA2P51587 3418 aa19.55■□□□□ 0.72
TRIM3-209ENST00000529529 MKI67P46013 3256 aaKnown RBP19.55■□□□□ 0.72
TRIM3-209ENST00000529529 USP17L15C9J2P7 530 aa19.54■□□□□ 0.72
TRIM3-209ENST00000529529 USP17L13C9JLJ4 530 aa19.54■□□□□ 0.72
TRIM3-209ENST00000529529 USP17L11C9JVI0 530 aa19.54■□□□□ 0.72
TRIM3-209ENST00000529529 USP17L18D6R9N7 530 aa19.54■□□□□ 0.72
TRIM3-209ENST00000529529 USP17L22D6RA61 530 aa19.54■□□□□ 0.72
TRIM3-209ENST00000529529 USP17L17D6RBQ6 530 aa19.54■□□□□ 0.72
TRIM3-209ENST00000529529 USP17L19D6RCP7 530 aa19.54■□□□□ 0.72
TRIM3-209ENST00000529529 USP17L20D6RJB6 530 aa19.54■□□□□ 0.72
TRIM3-209ENST00000529529 MPHOSPH10O00566 681 aaKnown RBP19.54■□□□□ 0.72
TRIM3-209ENST00000529529 PRKAB2O43741 272 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms