RNA–Protein interactions for RNA: ENST00000529472.1

CHD7-209, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 788 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-209ENST00000529472 SCYL3Q8IZE3 742 aa13.55□□□□□ -0.24
CHD7-209ENST00000529472 INCENPQ9NQS7 918 aa13.55□□□□□ -0.24
CHD7-209ENST00000529472 PICK1Q9NRD5 415 aa13.55□□□□□ -0.24
CHD7-209ENST00000529472 TOMM22Q9NS69 142 aa13.55□□□□□ -0.24
CHD7-209ENST00000529472 GH2P01242 217 aa13.54□□□□□ -0.24
CHD7-209ENST00000529472 CYP21A2P08686 494 aa13.54□□□□□ -0.24
CHD7-209ENST00000529472 AKR1B1P15121 316 aa13.54□□□□□ -0.24
CHD7-209ENST00000529472 JAG1P78504 1218 aa13.54□□□□□ -0.24
CHD7-209ENST00000529472 MKRN3Q13064 507 aaKnown RBP13.54□□□□□ -0.24
CHD7-209ENST00000529472 ABCB5Q2M3G0 1257 aa13.54□□□□□ -0.24
CHD7-209ENST00000529472 C8orf34Q49A92 452 aa13.54□□□□□ -0.24
CHD7-209ENST00000529472 NOL9Q5SY16 702 aaKnown RBP13.54□□□□□ -0.24
CHD7-209ENST00000529472 RGMBQ6NW40 437 aa13.54□□□□□ -0.24
CHD7-209ENST00000529472 CNKSR2Q8WXI2 1034 aa13.54□□□□□ -0.24
CHD7-209ENST00000529472 SLC10A4Q96EP9 437 aa13.54□□□□□ -0.24
CHD7-209ENST00000529472 ZNF287Q9HBT7 754 aa13.54□□□□□ -0.24
CHD7-209ENST00000529472 TAOK2Q9UL54 1235 aa13.54□□□□□ -0.24
CHD7-209ENST00000529472 ZBTB21Q9ULJ3 1066 aa13.54□□□□□ -0.24
CHD7-209ENST00000529472 TACC3Q9Y6A5 838 aa13.54□□□□□ -0.24
CHD7-209ENST00000529472 UNCXA6NJT0 531 aa13.53□□□□□ -0.24
CHD7-209ENST00000529472 RASSF10A6NK89 507 aa13.53□□□□□ -0.24
CHD7-209ENST00000529472 SLC27A2O14975 620 aa13.53□□□□□ -0.24
CHD7-209ENST00000529472 RASA1P20936 1047 aa13.53□□□□□ -0.24
CHD7-209ENST00000529472 RAB3GAP1Q15042 981 aa13.53□□□□□ -0.24
CHD7-209ENST00000529472 DEFB115Q30KQ5 88 aa13.53□□□□□ -0.24
CHD7-209ENST00000529472 AKNAD1Q5T1N1 836 aa13.53□□□□□ -0.24
CHD7-209ENST00000529472 CREB3L3Q68CJ9 461 aa13.53□□□□□ -0.24
CHD7-209ENST00000529472 CYP4F22Q6NT55 531 aa13.53□□□□□ -0.24
CHD7-209ENST00000529472 MFSD6Q6ZSS7 791 aa13.53□□□□□ -0.24
CHD7-209ENST00000529472 CCDC84Q86UT8 332 aaPredicted RBP13.53□□□□□ -0.24
CHD7-209ENST00000529472 RASAL3Q86YV0 1011 aa13.53□□□□□ -0.24
CHD7-209ENST00000529472 ZNF444Q8N0Y2 327 aaPredicted RBP13.53□□□□□ -0.24
CHD7-209ENST00000529472 STAG1Q8WVM7 1258 aa13.53□□□□□ -0.24
CHD7-209ENST00000529472 OPTNQ96CV9 577 aa13.53□□□□□ -0.24
CHD7-209ENST00000529472 OTUD5Q96G74 571 aa13.53□□□□□ -0.24
CHD7-209ENST00000529472 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.53□□□□□ -0.24
CHD7-209ENST00000529472 TAF6LQ9Y6J9 622 aa13.53□□□□□ -0.24
CHD7-209ENST00000529472 NEDD4P46934 1319 aa13.53□□□□□ -0.24
CHD7-209ENST00000529472 RANBP6O60518 1105 aaKnown RBP13.52□□□□□ -0.25
CHD7-209ENST00000529472 ASNSP08243 561 aa13.52□□□□□ -0.25
CHD7-209ENST00000529472 FAM47AQ5JRC9 791 aa13.52□□□□□ -0.25
CHD7-209ENST00000529472 HHIPL1Q96JK4 782 aa13.52□□□□□ -0.25
CHD7-209ENST00000529472 RNF41Q9H4P4 317 aaPredicted RBP13.52□□□□□ -0.25
CHD7-209ENST00000529472 CABP5Q9NP86 173 aa13.52□□□□□ -0.25
CHD7-209ENST00000529472 PHIPQ8WWQ0 1821 aa13.51□□□□□ -0.25
CHD7-209ENST00000529472 SPDYE5A6NIY4 337 aa13.51□□□□□ -0.25
CHD7-209ENST00000529472 ORC4O43929 436 aa13.51□□□□□ -0.25
CHD7-209ENST00000529472 SEC24BO95487 1268 aa13.51□□□□□ -0.25
CHD7-209ENST00000529472 SLC10A3P09131 477 aa13.51□□□□□ -0.25
CHD7-209ENST00000529472 TSPY3P0CV98 308 aa13.51□□□□□ -0.25
CHD7-209ENST00000529472 TSPY8P0CW00 308 aa13.51□□□□□ -0.25
CHD7-209ENST00000529472 PCP11498 1178 aaKnown RBP13.51□□□□□ -0.25
CHD7-209ENST00000529472 PTPRAP18433 802 aa13.51□□□□□ -0.25
CHD7-209ENST00000529472 GJA5P36382 358 aa13.51□□□□□ -0.25
CHD7-209ENST00000529472 SEPT2Q15019 361 aa13.51□□□□□ -0.25
CHD7-209ENST00000529472 NECTIN1Q15223 517 aa13.51□□□□□ -0.25
CHD7-209ENST00000529472 RNF20Q5VTR2 975 aa13.51□□□□□ -0.25
CHD7-209ENST00000529472 TMEM179Q6ZVK1 233 aa13.51□□□□□ -0.25
CHD7-209ENST00000529472 ERO1BQ86YB8 467 aa13.51□□□□□ -0.25
CHD7-209ENST00000529472 CLEC10AQ8IUN9 316 aa13.51□□□□□ -0.25
CHD7-209ENST00000529472 WNK4Q96J92 1243 aa13.51□□□□□ -0.25
CHD7-209ENST00000529472 CAPNS2Q96L46 248 aa13.51□□□□□ -0.25
CHD7-209ENST00000529472 CCDC17Q96LX7 622 aa13.51□□□□□ -0.25
CHD7-209ENST00000529472 ZHX2Q9Y6X8 837 aa13.51□□□□□ -0.25
CHD7-209ENST00000529472 TSPY2A6NKD2 308 aa13.5□□□□□ -0.25
CHD7-209ENST00000529472 USP17L5A8MUK1 530 aa13.5□□□□□ -0.25
CHD7-209ENST00000529472 FAM155AB1AL88 458 aaPredicted RBP13.5□□□□□ -0.25
CHD7-209ENST00000529472 B4E1Z4 1266 aa13.5□□□□□ -0.25
CHD7-209ENST00000529472 E7EWF7 191 aa13.5□□□□□ -0.25
CHD7-209ENST00000529472 FGRP09769 529 aa13.5□□□□□ -0.25
CHD7-209ENST00000529472 GUCY1A2P33402 732 aa13.5□□□□□ -0.25
CHD7-209ENST00000529472 TFAP4Q01664 338 aa13.5□□□□□ -0.25
CHD7-209ENST00000529472 SPRYD7Q5W111 196 aa13.5□□□□□ -0.25
CHD7-209ENST00000529472 NKX2-3Q8TAU0 364 aa13.5□□□□□ -0.25
CHD7-209ENST00000529472 CCDC102AQ96A19 550 aa13.5□□□□□ -0.25
CHD7-209ENST00000529472 GINM1Q9NU53 330 aa13.5□□□□□ -0.25
CHD7-209ENST00000529472 GREB1LQ9C091 1923 aaPredicted RBP13.5□□□□□ -0.25
CHD7-209ENST00000529472 TRIM75PA6NK02 468 aa13.49□□□□□ -0.25
CHD7-209ENST00000529472 IRF6O14896 467 aa13.49□□□□□ -0.25
CHD7-209ENST00000529472 EIF5BO60841 1220 aaKnown RBP13.49□□□□□ -0.25
CHD7-209ENST00000529472 AOC2O75106 756 aa13.49□□□□□ -0.25
CHD7-209ENST00000529472 MCCP23508 829 aa13.49□□□□□ -0.25
CHD7-209ENST00000529472 ECE1P42892 770 aa13.49□□□□□ -0.25
CHD7-209ENST00000529472 VEGFBP49765 207 aa13.49□□□□□ -0.25
CHD7-209ENST00000529472 ATP2B2Q01814 1243 aa13.49□□□□□ -0.25
CHD7-209ENST00000529472 ICA1Q05084 483 aa13.49□□□□□ -0.25
CHD7-209ENST00000529472 PPATQ06203 517 aa13.49□□□□□ -0.25
CHD7-209ENST00000529472 TRDNQ13061 729 aa13.49□□□□□ -0.25
CHD7-209ENST00000529472 PPIL2Q13356 520 aa13.49□□□□□ -0.25
CHD7-209ENST00000529472 STOX1Q6ZVD7 989 aa13.49□□□□□ -0.25
CHD7-209ENST00000529472 ESR2Q92731 530 aa13.49□□□□□ -0.25
CHD7-209ENST00000529472 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.49□□□□□ -0.25
CHD7-209ENST00000529472 USP26Q9BXU7 913 aa13.49□□□□□ -0.25
CHD7-209ENST00000529472 KRT23Q9C075 422 aa13.49□□□□□ -0.25
CHD7-209ENST00000529472 CNNM2Q9H8M5 875 aa13.49□□□□□ -0.25
CHD7-209ENST00000529472 PLIN4Q96Q06 1357 aa13.48□□□□□ -0.25
CHD7-209ENST00000529472 WDR33Q9C0J8 1336 aaKnown RBP13.48□□□□□ -0.25
CHD7-209ENST00000529472 NMT2O60551 498 aa13.48□□□□□ -0.25
CHD7-209ENST00000529472 KDM4AO75164 1064 aa13.48□□□□□ -0.25
CHD7-209ENST00000529472 ZBTB48P10074 688 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms