RNA–Protein interactions for RNA: ENST00000529386.5

CMTM1-212, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 924 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-212ENST00000529386 STK11IPQ8N1F8 1099 aa16.68■□□□□ 0.26
CMTM1-212ENST00000529386 STAG1Q8WVM7 1258 aa16.68■□□□□ 0.26
CMTM1-212ENST00000529386 ZKSCAN4Q969J2 545 aaPredicted RBP16.68■□□□□ 0.26
CMTM1-212ENST00000529386 KRT23Q9C075 422 aa16.68■□□□□ 0.26
CMTM1-212ENST00000529386 DNAJC18Q9H819 358 aa16.68■□□□□ 0.26
CMTM1-212ENST00000529386 FZD1Q9UP38 647 aa16.68■□□□□ 0.26
CMTM1-212ENST00000529386 LAMA4Q16363 1823 aa16.68■□□□□ 0.26
CMTM1-212ENST00000529386 ECE1P42892 770 aa16.67■□□□□ 0.26
CMTM1-212ENST00000529386 KRT32Q14532 448 aa16.67■□□□□ 0.26
CMTM1-212ENST00000529386 DEFB115Q30KQ5 88 aa16.67■□□□□ 0.26
CMTM1-212ENST00000529386 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.67■□□□□ 0.26
CMTM1-212ENST00000529386 TMEM179Q6ZVK1 233 aa16.67■□□□□ 0.26
CMTM1-212ENST00000529386 PAXIP1Q6ZW49 1069 aaPredicted RBP16.67■□□□□ 0.26
CMTM1-212ENST00000529386 ERO1BQ86YB8 467 aa16.67■□□□□ 0.26
CMTM1-212ENST00000529386 SLC44A5Q8NCS7 719 aa16.67■□□□□ 0.26
CMTM1-212ENST00000529386 ESR2Q92731 530 aa16.67■□□□□ 0.26
CMTM1-212ENST00000529386 UPF2Q9HAU5 1272 aaKnown RBP16.67■□□□□ 0.26
CMTM1-212ENST00000529386 AS3MTQ9HBK9 375 aa16.67■□□□□ 0.26
CMTM1-212ENST00000529386 RANBP6O60518 1105 aaKnown RBP16.66■□□□□ 0.26
CMTM1-212ENST00000529386 GDF11O95390 407 aa16.66■□□□□ 0.26
CMTM1-212ENST00000529386 CYP21A2P08686 494 aa16.66■□□□□ 0.26
CMTM1-212ENST00000529386 FGRP09769 529 aa16.66■□□□□ 0.26
CMTM1-212ENST00000529386 TSPY3P0CV98 308 aa16.66■□□□□ 0.26
CMTM1-212ENST00000529386 TSPY8P0CW00 308 aa16.66■□□□□ 0.26
CMTM1-212ENST00000529386 PPATQ06203 517 aa16.66■□□□□ 0.26
CMTM1-212ENST00000529386 NECTIN1Q15223 517 aa16.66■□□□□ 0.26
CMTM1-212ENST00000529386 RRP12Q5JTH9 1297 aaKnown RBP16.66■□□□□ 0.26
CMTM1-212ENST00000529386 CREB3L3Q68CJ9 461 aa16.66■□□□□ 0.26
CMTM1-212ENST00000529386 RALYLQ86SE5 291 aaKnown RBP16.66■□□□□ 0.26
CMTM1-212ENST00000529386 ELP3Q9H9T3 547 aa16.66■□□□□ 0.26
CMTM1-212ENST00000529386 ZBTB21Q9ULJ3 1066 aa16.66■□□□□ 0.26
CMTM1-212ENST00000529386 RASSF10A6NK89 507 aa16.65■□□□□ 0.26
CMTM1-212ENST00000529386 TSPY2A6NKD2 308 aa16.65■□□□□ 0.26
CMTM1-212ENST00000529386 USP17L5A8MUK1 530 aa16.65■□□□□ 0.26
CMTM1-212ENST00000529386 SLC27A2O14975 620 aa16.65■□□□□ 0.26
CMTM1-212ENST00000529386 PRDM1O75626 825 aa16.65■□□□□ 0.26
CMTM1-212ENST00000529386 GH2P01242 217 aa16.65■□□□□ 0.26
CMTM1-212ENST00000529386 RASA1P20936 1047 aa16.65■□□□□ 0.26
CMTM1-212ENST00000529386 EVX2Q03828 476 aa16.65■□□□□ 0.26
CMTM1-212ENST00000529386 RAB3GAP1Q15042 981 aa16.65■□□□□ 0.26
CMTM1-212ENST00000529386 C8orf34Q49A92 452 aa16.65■□□□□ 0.26
CMTM1-212ENST00000529386 CCDC178Q5BJE1 867 aa16.65■□□□□ 0.26
CMTM1-212ENST00000529386 CLMNQ96JQ2 1002 aa16.65■□□□□ 0.26
CMTM1-212ENST00000529386 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.65■□□□□ 0.26
CMTM1-212ENST00000529386 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.65■□□□□ 0.26
CMTM1-212ENST00000529386 SNCAIPQ9Y6H5 919 aa16.65■□□□□ 0.26
CMTM1-212ENST00000529386 DOCK1Q14185 1865 aa16.65■□□□□ 0.26
CMTM1-212ENST00000529386 SPDYE5A6NIY4 337 aa16.64■□□□□ 0.25
CMTM1-212ENST00000529386 SLURP2P0DP57 97 aa16.64■□□□□ 0.25
CMTM1-212ENST00000529386 ZBTB48P10074 688 aaPredicted RBP16.64■□□□□ 0.25
CMTM1-212ENST00000529386 PTPRAP18433 802 aa16.64■□□□□ 0.25
CMTM1-212ENST00000529386 TFAP4Q01664 338 aa16.64■□□□□ 0.25
CMTM1-212ENST00000529386 TBC1D10CQ8IV04 446 aa16.64■□□□□ 0.25
CMTM1-212ENST00000529386 NCOA7Q8NI08 942 aa16.64■□□□□ 0.25
CMTM1-212ENST00000529386 OPTNQ96CV9 577 aa16.64■□□□□ 0.25
CMTM1-212ENST00000529386 USP26Q9BXU7 913 aa16.64■□□□□ 0.25
CMTM1-212ENST00000529386 SH2D4AQ9H788 454 aa16.64■□□□□ 0.25
CMTM1-212ENST00000529386 KANSL2Q9H9L4 492 aa16.64■□□□□ 0.25
CMTM1-212ENST00000529386 OTOFQ9HC10 1997 aa16.64■□□□□ 0.25
CMTM1-212ENST00000529386 ATAD5Q96QE3 1844 aa16.63■□□□□ 0.25
CMTM1-212ENST00000529386 SMIM22K7EJ46 135 aa16.63■□□□□ 0.25
CMTM1-212ENST00000529386 AKR1B1P15121 316 aa16.63■□□□□ 0.25
CMTM1-212ENST00000529386 HSPA4P34932 840 aa16.63■□□□□ 0.25
CMTM1-212ENST00000529386 PPIL2Q13356 520 aa16.63■□□□□ 0.25
CMTM1-212ENST00000529386 IQCA1Q86XH1 822 aa16.63■□□□□ 0.25
CMTM1-212ENST00000529386 NEDD1Q8NHV4 660 aa16.63■□□□□ 0.25
CMTM1-212ENST00000529386 OTUD5Q96G74 571 aa16.63■□□□□ 0.25
CMTM1-212ENST00000529386 ARHGEF10LQ9HCE6 1279 aa16.63■□□□□ 0.25
CMTM1-212ENST00000529386 ZHX2Q9Y6X8 837 aa16.63■□□□□ 0.25
CMTM1-212ENST00000529386 E7EWF7 191 aa16.62■□□□□ 0.25
CMTM1-212ENST00000529386 HMGB1P09429 215 aaKnown RBP16.62■□□□□ 0.25
CMTM1-212ENST00000529386 NOGQ13253 232 aa16.62■□□□□ 0.25
CMTM1-212ENST00000529386 SART3Q15020 963 aaKnown RBP16.62■□□□□ 0.25
CMTM1-212ENST00000529386 TSGA10IPQ3SY00 556 aa16.62■□□□□ 0.25
CMTM1-212ENST00000529386 REM2Q8IYK8 340 aaPredicted RBP16.62■□□□□ 0.25
CMTM1-212ENST00000529386 ZNF280CQ8ND82 737 aa16.62■□□□□ 0.25
CMTM1-212ENST00000529386 WNK4Q96J92 1243 aa16.62■□□□□ 0.25
CMTM1-212ENST00000529386 WDR18Q9BV38 432 aa16.62■□□□□ 0.25
CMTM1-212ENST00000529386 NBPF3Q9H094 633 aa16.62■□□□□ 0.25
CMTM1-212ENST00000529386 CXCL11O14625 94 aa16.61■□□□□ 0.25
CMTM1-212ENST00000529386 SLC10A3P09131 477 aa16.61■□□□□ 0.25
CMTM1-212ENST00000529386 PSMA5P28066 241 aa16.61■□□□□ 0.25
CMTM1-212ENST00000529386 GTF2A2P52657 109 aa16.61■□□□□ 0.25
CMTM1-212ENST00000529386 ICA1Q05084 483 aa16.61■□□□□ 0.25
CMTM1-212ENST00000529386 SNAPC2Q13487 334 aa16.61■□□□□ 0.25
CMTM1-212ENST00000529386 RRP1BQ14684 758 aaKnown RBP16.61■□□□□ 0.25
CMTM1-212ENST00000529386 SEPT2Q15019 361 aa16.61■□□□□ 0.25
CMTM1-212ENST00000529386 FAM47AQ5JRC9 791 aa16.61■□□□□ 0.25
CMTM1-212ENST00000529386 SPRYD7Q5W111 196 aa16.61■□□□□ 0.25
CMTM1-212ENST00000529386 RASAL3Q86YV0 1011 aa16.61■□□□□ 0.25
CMTM1-212ENST00000529386 CAPNS2Q96L46 248 aa16.61■□□□□ 0.25
CMTM1-212ENST00000529386 FEZ1Q99689 392 aa16.61■□□□□ 0.25
CMTM1-212ENST00000529386 UBAC1Q9BSL1 405 aa16.61■□□□□ 0.25
CMTM1-212ENST00000529386 NEDD4P46934 1319 aa16.61■□□□□ 0.25
CMTM1-212ENST00000529386 PLIN4Q96Q06 1357 aa16.61■□□□□ 0.25
CMTM1-212ENST00000529386 ERICH2A1L162 156 aa16.6■□□□□ 0.25
CMTM1-212ENST00000529386 B4E1Z4 1266 aa16.6■□□□□ 0.25
CMTM1-212ENST00000529386 KDM4AO75164 1064 aa16.6■□□□□ 0.25
CMTM1-212ENST00000529386 USP14P54578 494 aa16.6■□□□□ 0.25
CMTM1-212ENST00000529386 INHBEP58166 350 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms