RNA–Protein interactions for RNA: ENST00000529265.5

BEST1-206, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,421 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-206ENST00000529265 CAP2P40123 477 aa16.47■□□□□ 0.23
BEST1-206ENST00000529265 TRDNQ13061 729 aa16.47■□□□□ 0.23
BEST1-206ENST00000529265 ABCB5Q2M3G0 1257 aa16.47■□□□□ 0.23
BEST1-206ENST00000529265 CCDC17Q96LX7 622 aa16.47■□□□□ 0.23
BEST1-206ENST00000529265 PICK1Q9NRD5 415 aa16.47■□□□□ 0.23
BEST1-206ENST00000529265 RASA1P20936 1047 aa16.46■□□□□ 0.23
BEST1-206ENST00000529265 HSPA4P34932 840 aa16.46■□□□□ 0.23
BEST1-206ENST00000529265 C1QTNF8P60827 252 aa16.46■□□□□ 0.23
BEST1-206ENST00000529265 VGLL4Q14135 290 aa16.46■□□□□ 0.23
BEST1-206ENST00000529265 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.46■□□□□ 0.23
BEST1-206ENST00000529265 SCYL3Q8IZE3 742 aa16.46■□□□□ 0.23
BEST1-206ENST00000529265 SLC10A4Q96EP9 437 aa16.46■□□□□ 0.23
BEST1-206ENST00000529265 NBPF3Q9H094 633 aa16.46■□□□□ 0.23
BEST1-206ENST00000529265 CNNM2Q9H8M5 875 aa16.46■□□□□ 0.23
BEST1-206ENST00000529265 UPF2Q9HAU5 1272 aaKnown RBP16.46■□□□□ 0.23
BEST1-206ENST00000529265 TSPY2A6NKD2 308 aa16.45■□□□□ 0.22
BEST1-206ENST00000529265 ORC4O43929 436 aa16.45■□□□□ 0.22
BEST1-206ENST00000529265 GH2P01242 217 aa16.45■□□□□ 0.22
BEST1-206ENST00000529265 ASNSP08243 561 aa16.45■□□□□ 0.22
BEST1-206ENST00000529265 TSPY3P0CV98 308 aa16.45■□□□□ 0.22
BEST1-206ENST00000529265 TSPY8P0CW00 308 aa16.45■□□□□ 0.22
BEST1-206ENST00000529265 AKR1B1P15121 316 aa16.45■□□□□ 0.22
BEST1-206ENST00000529265 RRP1BQ14684 758 aaKnown RBP16.45■□□□□ 0.22
BEST1-206ENST00000529265 FAM47AQ5JRC9 791 aa16.45■□□□□ 0.22
BEST1-206ENST00000529265 LDLRAD1Q5T700 205 aa16.45■□□□□ 0.22
BEST1-206ENST00000529265 PAXIP1Q6ZW49 1069 aaPredicted RBP16.45■□□□□ 0.22
BEST1-206ENST00000529265 RALYLQ86SE5 291 aaKnown RBP16.45■□□□□ 0.22
BEST1-206ENST00000529265 SAPCD2Q86UD0 394 aa16.45■□□□□ 0.22
BEST1-206ENST00000529265 CLMNQ96JQ2 1002 aa16.45■□□□□ 0.22
BEST1-206ENST00000529265 KRT23Q9C075 422 aa16.45■□□□□ 0.22
BEST1-206ENST00000529265 ELP3Q9H9T3 547 aa16.45■□□□□ 0.22
BEST1-206ENST00000529265 CREBZFQ9NS37 354 aa16.45■□□□□ 0.22
BEST1-206ENST00000529265 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.45■□□□□ 0.22
BEST1-206ENST00000529265 TLL2Q9Y6L7 1015 aa16.45■□□□□ 0.22
BEST1-206ENST00000529265 UNCXA6NJT0 531 aa16.45■□□□□ 0.22
BEST1-206ENST00000529265 E7EWF7 191 aa16.45■□□□□ 0.22
BEST1-206ENST00000529265 TFAP4Q01664 338 aa16.45■□□□□ 0.22
BEST1-206ENST00000529265 RAB3GAP1Q15042 981 aa16.45■□□□□ 0.22
BEST1-206ENST00000529265 NCOA7Q8NI08 942 aa16.45■□□□□ 0.22
BEST1-206ENST00000529265 ESR2Q92731 530 aa16.45■□□□□ 0.22
BEST1-206ENST00000529265 BACH2Q9BYV9 841 aa16.45■□□□□ 0.22
BEST1-206ENST00000529265 ZBTB21Q9ULJ3 1066 aa16.45■□□□□ 0.22
BEST1-206ENST00000529265 TACC3Q9Y6A5 838 aa16.45■□□□□ 0.22
BEST1-206ENST00000529265 NEDD4P46934 1319 aa16.44■□□□□ 0.22
BEST1-206ENST00000529265 B4E1Z4 1266 aa16.44■□□□□ 0.22
BEST1-206ENST00000529265 FGRP09769 529 aa16.44■□□□□ 0.22
BEST1-206ENST00000529265 ZNF157P51786 506 aaPredicted RBP16.44■□□□□ 0.22
BEST1-206ENST00000529265 KRT32Q14532 448 aa16.44■□□□□ 0.22
BEST1-206ENST00000529265 NOL9Q5SY16 702 aaKnown RBP16.44■□□□□ 0.22
BEST1-206ENST00000529265 TMEM179Q6ZVK1 233 aa16.44■□□□□ 0.22
BEST1-206ENST00000529265 GINM1Q9NU53 330 aa16.44■□□□□ 0.22
BEST1-206ENST00000529265 SNCAIPQ9Y6H5 919 aa16.44■□□□□ 0.22
BEST1-206ENST00000529265 TAF6LQ9Y6J9 622 aa16.44■□□□□ 0.22
BEST1-206ENST00000529265 KDM4AO75164 1064 aa16.43■□□□□ 0.22
BEST1-206ENST00000529265 SHROOM1Q2M3G4 852 aaPredicted RBP16.43■□□□□ 0.22
BEST1-206ENST00000529265 RGMBQ6NW40 437 aa16.43■□□□□ 0.22
BEST1-206ENST00000529265 RASEFQ8IZ41 740 aa16.43■□□□□ 0.22
BEST1-206ENST00000529265 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.43■□□□□ 0.22
BEST1-206ENST00000529265 MYH4Q9Y623 1939 aa16.42■□□□□ 0.22
BEST1-206ENST00000529265 USP17L5A8MUK1 530 aa16.42■□□□□ 0.22
BEST1-206ENST00000529265 PTPRAP18433 802 aa16.42■□□□□ 0.22
BEST1-206ENST00000529265 JAG1P78504 1218 aa16.42■□□□□ 0.22
BEST1-206ENST00000529265 GRM1Q13255 1194 aa16.42■□□□□ 0.22
BEST1-206ENST00000529265 SEPT2Q15019 361 aa16.42■□□□□ 0.22
BEST1-206ENST00000529265 STOX1Q6ZVD7 989 aa16.42■□□□□ 0.22
BEST1-206ENST00000529265 ERO1BQ86YB8 467 aa16.42■□□□□ 0.22
BEST1-206ENST00000529265 NEDD1Q8NHV4 660 aa16.42■□□□□ 0.22
BEST1-206ENST00000529265 OTUD5Q96G74 571 aa16.42■□□□□ 0.22
BEST1-206ENST00000529265 AS3MTQ9HBK9 375 aa16.42■□□□□ 0.22
BEST1-206ENST00000529265 SNX14Q9Y5W7 946 aa16.42■□□□□ 0.22
BEST1-206ENST00000529265 NT5C2P49902 561 aa16.41■□□□□ 0.22
BEST1-206ENST00000529265 ATP2B2Q01814 1243 aa16.41■□□□□ 0.22
BEST1-206ENST00000529265 DEFB115Q30KQ5 88 aa16.41■□□□□ 0.22
BEST1-206ENST00000529265 TSGA10IPQ3SY00 556 aa16.41■□□□□ 0.22
BEST1-206ENST00000529265 CCDC84Q86UT8 332 aaPredicted RBP16.41■□□□□ 0.22
BEST1-206ENST00000529265 IQCA1Q86XH1 822 aa16.41■□□□□ 0.22
BEST1-206ENST00000529265 KCNB2Q92953 911 aa16.41■□□□□ 0.22
BEST1-206ENST00000529265 OPTNQ96CV9 577 aa16.41■□□□□ 0.22
BEST1-206ENST00000529265 NEK1Q96PY6 1258 aa16.41■□□□□ 0.22
BEST1-206ENST00000529265 ZHX2Q9Y6X8 837 aa16.41■□□□□ 0.22
BEST1-206ENST00000529265 PHIPQ8WWQ0 1821 aa16.4■□□□□ 0.22
BEST1-206ENST00000529265 HSPA6P17066 643 aa16.4■□□□□ 0.22
BEST1-206ENST00000529265 PSMA5P28066 241 aa16.4■□□□□ 0.22
BEST1-206ENST00000529265 ICA1Q05084 483 aa16.4■□□□□ 0.22
BEST1-206ENST00000529265 PPATQ06203 517 aa16.4■□□□□ 0.22
BEST1-206ENST00000529265 MKRN3Q13064 507 aaKnown RBP16.4■□□□□ 0.22
BEST1-206ENST00000529265 CNKSR2Q8WXI2 1034 aa16.4■□□□□ 0.22
BEST1-206ENST00000529265 HHIPL1Q96JK4 782 aa16.4■□□□□ 0.22
BEST1-206ENST00000529265 JAKMIP1Q96N16 626 aaKnown RBP16.4■□□□□ 0.22
BEST1-206ENST00000529265 UBAC1Q9BSL1 405 aa16.4■□□□□ 0.22
BEST1-206ENST00000529265 C22orf23Q9BZE7 217 aa16.4■□□□□ 0.22
BEST1-206ENST00000529265 KANSL2Q9H9L4 492 aa16.4■□□□□ 0.22
BEST1-206ENST00000529265 ZSWIM5Q9P217 1185 aa16.4■□□□□ 0.22
BEST1-206ENST00000529265 GREB1LQ9C091 1923 aaPredicted RBP16.4■□□□□ 0.22
BEST1-206ENST00000529265 SPDYE5A6NIY4 337 aa16.39■□□□□ 0.21
BEST1-206ENST00000529265 GUCY1A2P33402 732 aa16.39■□□□□ 0.21
BEST1-206ENST00000529265 HTRA3P83110 453 aa16.39■□□□□ 0.21
BEST1-206ENST00000529265 ADCK5Q3MIX3 580 aa16.39■□□□□ 0.21
BEST1-206ENST00000529265 PPP4R3BQ5MIZ7 849 aa16.39■□□□□ 0.21
BEST1-206ENST00000529265 CCDC102AQ96A19 550 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms