RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 C19orf81C9J6K1 198 aa14.59□□□□□ -0.07
COPB1-206ENST00000529210 CYP2C8P10632 490 aa14.59□□□□□ -0.07
COPB1-206ENST00000529210 CTGFP29279 349 aa14.59□□□□□ -0.07
COPB1-206ENST00000529210 JAG1P78504 1218 aa14.59□□□□□ -0.07
COPB1-206ENST00000529210 PABPC4Q13310 644 aaKnown RBP eCLIP14.59□□□□□ -0.07
COPB1-206ENST00000529210 EDC3Q96F86 508 aaKnown RBP14.59□□□□□ -0.07
COPB1-206ENST00000529210 ZNF333Q96JL9 665 aa14.59□□□□□ -0.07
COPB1-206ENST00000529210 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.59□□□□□ -0.07
COPB1-206ENST00000529210 ECHDC1Q9NTX5 307 aa14.59□□□□□ -0.07
COPB1-206ENST00000529210 SRRDQ9UH36 339 aa14.59□□□□□ -0.07
COPB1-206ENST00000529210 SAP30BPQ9UHR5 308 aaKnown RBP14.59□□□□□ -0.07
COPB1-206ENST00000529210 ZBTB21Q9ULJ3 1066 aa14.59□□□□□ -0.07
COPB1-206ENST00000529210 PTCH2Q9Y6C5 1203 aa14.59□□□□□ -0.07
COPB1-206ENST00000529210 SMARCA5O60264 1052 aaPredicted RBP14.58□□□□□ -0.08
COPB1-206ENST00000529210 HOXD10P28358 340 aa14.58□□□□□ -0.08
COPB1-206ENST00000529210 HOXA7P31268 230 aaPredicted RBP14.58□□□□□ -0.08
COPB1-206ENST00000529210 PSMC4P43686 418 aa14.58□□□□□ -0.08
COPB1-206ENST00000529210 HMGCS2P54868 508 aa14.58□□□□□ -0.08
COPB1-206ENST00000529210 AAMPQ13685 434 aa14.58□□□□□ -0.08
COPB1-206ENST00000529210 TREML2Q5T2D2 321 aa14.58□□□□□ -0.08
COPB1-206ENST00000529210 ZSCAN25Q6NSZ9 544 aa14.58□□□□□ -0.08
COPB1-206ENST00000529210 NBPF11Q86T75 865 aa14.58□□□□□ -0.08
COPB1-206ENST00000529210 TRIM47Q96LD4 638 aa14.58□□□□□ -0.08
COPB1-206ENST00000529210 DCP1AQ9NPI6 582 aaPredicted RBP14.58□□□□□ -0.08
COPB1-206ENST00000529210 ATP8A2Q9NTI2 1148 aa14.58□□□□□ -0.08
COPB1-206ENST00000529210 KIAA0100Q14667 2235 aaKnown RBP14.57□□□□□ -0.08
COPB1-206ENST00000529210 USP17L10C9JJH3 530 aa14.57□□□□□ -0.08
COPB1-206ENST00000529210 GCLCP48506 637 aaPredicted RBP14.57□□□□□ -0.08
COPB1-206ENST00000529210 PLCD1P51178 756 aa14.57□□□□□ -0.08
COPB1-206ENST00000529210 FAM110CQ1W6H9 321 aa14.57□□□□□ -0.08
COPB1-206ENST00000529210 LCORLQ8N3X6 602 aa14.57□□□□□ -0.08
COPB1-206ENST00000529210 GPATCH3Q96I76 525 aa14.57□□□□□ -0.08
COPB1-206ENST00000529210 C12orf42Q96LP6 360 aa14.57□□□□□ -0.08
COPB1-206ENST00000529210 GDF11O95390 407 aa14.56□□□□□ -0.08
COPB1-206ENST00000529210 OSBPP22059 807 aa14.56□□□□□ -0.08
COPB1-206ENST00000529210 SHMT1P34896 483 aa14.56□□□□□ -0.08
COPB1-206ENST00000529210 FCGRTP55899 365 aa14.56□□□□□ -0.08
COPB1-206ENST00000529210 SLC9C1Q4G0N8 1177 aa14.56□□□□□ -0.08
COPB1-206ENST00000529210 KBTBD3Q8NAB2 608 aa14.56□□□□□ -0.08
COPB1-206ENST00000529210 SMCR8Q8TEV9 937 aaPredicted RBP14.56□□□□□ -0.08
COPB1-206ENST00000529210 TTC41PQ6P2S7 1318 aa14.56□□□□□ -0.08
COPB1-206ENST00000529210 GH2P01242 217 aa14.55□□□□□ -0.08
COPB1-206ENST00000529210 MTMR2Q13614 643 aa14.55□□□□□ -0.08
COPB1-206ENST00000529210 SHROOM1Q2M3G4 852 aaPredicted RBP14.55□□□□□ -0.08
COPB1-206ENST00000529210 CERKLQ49MI3 558 aaPredicted RBP14.55□□□□□ -0.08
COPB1-206ENST00000529210 SDR42E1Q8WUS8 393 aa14.55□□□□□ -0.08
COPB1-206ENST00000529210 ASCC2Q9H1I8 757 aaPredicted RBP14.55□□□□□ -0.08
COPB1-206ENST00000529210 MCM9Q9NXL9 1143 aa14.55□□□□□ -0.08
COPB1-206ENST00000529210 MORF4L1Q9UBU8 362 aa14.55□□□□□ -0.08
COPB1-206ENST00000529210 PDE4DIPQ5VU43 2346 aa14.55□□□□□ -0.08
COPB1-206ENST00000529210 MBD4O95243 580 aa14.54□□□□□ -0.08
COPB1-206ENST00000529210 FMNL1O95466 1100 aaPredicted RBP14.54□□□□□ -0.08
COPB1-206ENST00000529210 POLR3DP05423 398 aaPredicted RBP14.54□□□□□ -0.08
COPB1-206ENST00000529210 HDAC1Q13547 482 aaPredicted RBP14.54□□□□□ -0.08
COPB1-206ENST00000529210 IRF5Q13568 498 aa14.54□□□□□ -0.08
COPB1-206ENST00000529210 USP17L2Q6R6M4 530 aa14.54□□□□□ -0.08
COPB1-206ENST00000529210 GTF3C2Q8WUA4 911 aaPredicted RBP14.54□□□□□ -0.08
COPB1-206ENST00000529210 KIAA1683Q9H0B3 1180 aa14.54□□□□□ -0.08
COPB1-206ENST00000529210 ARMT1Q9H993 441 aa14.54□□□□□ -0.08
COPB1-206ENST00000529210 TMOD4Q9NZQ9 345 aa14.54□□□□□ -0.08
COPB1-206ENST00000529210 SWAP70Q9UH65 585 aa14.54□□□□□ -0.08
COPB1-206ENST00000529210 MYPNQ86TC9 1320 aa14.54□□□□□ -0.08
COPB1-206ENST00000529210 SALL3Q9BXA9 1300 aa14.54□□□□□ -0.08
COPB1-206ENST00000529210 MKI67P46013 3256 aaKnown RBP14.54□□□□□ -0.08
COPB1-206ENST00000529210 BAZ2AQ9UIF9 1905 aaKnown RBP14.53□□□□□ -0.08
COPB1-206ENST00000529210 POTEFA5A3E0 1075 aa14.53□□□□□ -0.08
COPB1-206ENST00000529210 ZFYP08048 801 aaPredicted RBP14.53□□□□□ -0.08
COPB1-206ENST00000529210 GUCY1A2P33402 732 aa14.53□□□□□ -0.08
COPB1-206ENST00000529210 USP14P54578 494 aa14.53□□□□□ -0.08
COPB1-206ENST00000529210 ABCB5Q2M3G0 1257 aa14.53□□□□□ -0.08
COPB1-206ENST00000529210 CRBNQ96SW2 442 aa14.53□□□□□ -0.08
COPB1-206ENST00000529210 PUS7LQ9H0K6 701 aaKnown RBP14.53□□□□□ -0.08
COPB1-206ENST00000529210 CABP5Q9NP86 173 aa14.53□□□□□ -0.08
COPB1-206ENST00000529210 EMILIN3Q9NT22 766 aa14.53□□□□□ -0.08
COPB1-206ENST00000529210 DOCK3Q8IZD9 2030 aa14.53□□□□□ -0.08
COPB1-206ENST00000529210 MYH8P13535 1937 aa14.53□□□□□ -0.08
COPB1-206ENST00000529210 ERC2O15083 957 aa14.52□□□□□ -0.09
COPB1-206ENST00000529210 CHGBP05060 677 aa14.52□□□□□ -0.09
COPB1-206ENST00000529210 GRK4P32298 578 aa14.52□□□□□ -0.09
COPB1-206ENST00000529210 PRKCZQ05513 592 aa14.52□□□□□ -0.09
COPB1-206ENST00000529210 SLC4A8Q2Y0W8 1093 aa14.52□□□□□ -0.09
COPB1-206ENST00000529210 SLFNL1Q499Z3 407 aa14.52□□□□□ -0.09
COPB1-206ENST00000529210 C12orf60Q5U649 245 aa14.52□□□□□ -0.09
COPB1-206ENST00000529210 GIMAP6Q6P9H5 292 aa14.52□□□□□ -0.09
COPB1-206ENST00000529210 ANKRD13CQ8N6S4 541 aa14.52□□□□□ -0.09
COPB1-206ENST00000529210 SLAIN1Q8ND83 568 aa14.52□□□□□ -0.09
COPB1-206ENST00000529210 PI4K2BQ8TCG2 481 aa14.52□□□□□ -0.09
COPB1-206ENST00000529210 PXYLP1Q8TE99 480 aa14.52□□□□□ -0.09
COPB1-206ENST00000529210 APPBP2Q92624 585 aa14.52□□□□□ -0.09
COPB1-206ENST00000529210 GCC1Q96CN9 775 aa14.52□□□□□ -0.09
COPB1-206ENST00000529210 PRKAB2O43741 272 aa14.51□□□□□ -0.09
COPB1-206ENST00000529210 GLRX3O76003 335 aaKnown RBP14.51□□□□□ -0.09
COPB1-206ENST00000529210 IRX3P78415 501 aaPredicted RBP14.51□□□□□ -0.09
COPB1-206ENST00000529210 LRRFIP1Q32MZ4 808 aaKnown RBP14.51□□□□□ -0.09
COPB1-206ENST00000529210 LBX2Q6XYB7 198 aa14.51□□□□□ -0.09
COPB1-206ENST00000529210 RAET1EQ8TD07 263 aa14.51□□□□□ -0.09
COPB1-206ENST00000529210 STRBPQ96SI9 672 aaKnown RBP14.51□□□□□ -0.09
COPB1-206ENST00000529210 TMEM106CQ9BVX2 250 aa14.51□□□□□ -0.09
COPB1-206ENST00000529210 BCL11AQ9H165 835 aa14.51□□□□□ -0.09
COPB1-206ENST00000529210 TNPO2O14787 897 aaKnown RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms