RNA–Protein interactions for RNA: ENST00000529063.1

NUP98-215, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-215ENST00000529063 PRRT2Q7Z6L0 340 aaPredicted RBP7.51□□□□□ -1.21
NUP98-215ENST00000529063 WDR66Q8TBY9 1149 aa7.51□□□□□ -1.21
NUP98-215ENST00000529063 RAET1EQ8TD07 263 aa7.51□□□□□ -1.21
NUP98-215ENST00000529063 SSH1Q8WYL5 1049 aa7.51□□□□□ -1.21
NUP98-215ENST00000529063 LPIN2Q92539 896 aa7.51□□□□□ -1.21
NUP98-215ENST00000529063 UNC93B1Q9H1C4 597 aa7.51□□□□□ -1.21
NUP98-215ENST00000529063 PLSCR2Q9NRY7 297 aa7.51□□□□□ -1.21
NUP98-215ENST00000529063 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.51□□□□□ -1.21
NUP98-215ENST00000529063 LIMD1Q9UGP4 676 aa7.51□□□□□ -1.21
NUP98-215ENST00000529063 GAKO14976 1311 aa7.51□□□□□ -1.21
NUP98-215ENST00000529063 PTPRCP08575 1304 aa7.51□□□□□ -1.21
NUP98-215ENST00000529063 SALL1Q9NSC2 1324 aa7.51□□□□□ -1.21
NUP98-215ENST00000529063 DDX60LQ5H9U9 1706 aaKnown RBP7.5□□□□□ -1.21
NUP98-215ENST00000529063 SOX1O00570 391 aaPredicted RBP7.5□□□□□ -1.21
NUP98-215ENST00000529063 CXCL11O14625 94 aa7.5□□□□□ -1.21
NUP98-215ENST00000529063 ELNP15502 786 aa7.5□□□□□ -1.21
NUP98-215ENST00000529063 PTPRAP18433 802 aa7.5□□□□□ -1.21
NUP98-215ENST00000529063 ADORA1P30542 326 aa7.5□□□□□ -1.21
NUP98-215ENST00000529063 RGS3P49796 1198 aa7.5□□□□□ -1.21
NUP98-215ENST00000529063 PRSS12P56730 875 aa7.5□□□□□ -1.21
NUP98-215ENST00000529063 MAP3K10Q02779 954 aa7.5□□□□□ -1.21
NUP98-215ENST00000529063 CCDC84Q86UT8 332 aaPredicted RBP7.5□□□□□ -1.21
NUP98-215ENST00000529063 ZNF384Q8TF68 577 aa7.5□□□□□ -1.21
NUP98-215ENST00000529063 U2AF1L4Q8WU68 220 aaKnown RBP7.5□□□□□ -1.21
NUP98-215ENST00000529063 PARK7Q99497 189 aaKnown RBP7.5□□□□□ -1.21
NUP98-215ENST00000529063 IDI2Q9BXS1 227 aa7.5□□□□□ -1.21
NUP98-215ENST00000529063 DDX4Q9NQI0 724 aaKnown RBP7.5□□□□□ -1.21
NUP98-215ENST00000529063 AFG3L2Q9Y4W6 797 aa7.5□□□□□ -1.21
NUP98-215ENST00000529063 MAST2Q6P0Q8 1798 aa7.5□□□□□ -1.21
NUP98-215ENST00000529063 FOCADQ5VW36 1801 aa7.5□□□□□ -1.21
NUP98-215ENST00000529063 DDTLA6NHG4 134 aaPredicted RBP7.49□□□□□ -1.21
NUP98-215ENST00000529063 ZBTB7BO15156 539 aaPredicted RBP7.49□□□□□ -1.21
NUP98-215ENST00000529063 FARP2O94887 1054 aaPredicted RBP7.49□□□□□ -1.21
NUP98-215ENST00000529063 LDHBP07195 334 aaKnown RBP7.49□□□□□ -1.21
NUP98-215ENST00000529063 FLT3LGP49771 235 aa7.49□□□□□ -1.21
NUP98-215ENST00000529063 FCGRTP55899 365 aa7.49□□□□□ -1.21
NUP98-215ENST00000529063 ATP2B3Q16720 1220 aa7.49□□□□□ -1.21
NUP98-215ENST00000529063 PPP2R2DQ66LE6 453 aa7.49□□□□□ -1.21
NUP98-215ENST00000529063 SCYL3Q8IZE3 742 aa7.49□□□□□ -1.21
NUP98-215ENST00000529063 FAM9BQ8IZU0 186 aa7.49□□□□□ -1.21
NUP98-215ENST00000529063 NKX2-3Q8TAU0 364 aa7.49□□□□□ -1.21
NUP98-215ENST00000529063 SPIRE2Q8WWL2 714 aa7.49□□□□□ -1.21
NUP98-215ENST00000529063 DPF3Q92784 378 aa7.49□□□□□ -1.21
NUP98-215ENST00000529063 CDCA7LQ96GN5 454 aa7.49□□□□□ -1.21
NUP98-215ENST00000529063 TRAIPQ9BWF2 469 aa7.49□□□□□ -1.21
NUP98-215ENST00000529063 RNF208Q9H0X6 261 aa7.49□□□□□ -1.21
NUP98-215ENST00000529063 SIL1Q9H173 461 aa7.49□□□□□ -1.21
NUP98-215ENST00000529063 USP40Q9NVE5 1235 aa7.49□□□□□ -1.21
NUP98-215ENST00000529063 PA2G4Q9UQ80 394 aaKnown RBP7.49□□□□□ -1.21
NUP98-215ENST00000529063 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.49□□□□□ -1.21
NUP98-215ENST00000529063 ZHX2Q9Y6X8 837 aa7.49□□□□□ -1.21
NUP98-215ENST00000529063 FRMPD3Q5JV73 1810 aa7.49□□□□□ -1.21
NUP98-215ENST00000529063 MYO5AQ9Y4I1 1855 aaKnown RBP7.49□□□□□ -1.21
NUP98-215ENST00000529063 FAM196BA6NMK8 535 aa7.48□□□□□ -1.21
NUP98-215ENST00000529063 ADCY3O60266 1144 aa7.48□□□□□ -1.21
NUP98-215ENST00000529063 ENTPD3O75355 529 aa7.48□□□□□ -1.21
NUP98-215ENST00000529063 CIAO1O76071 339 aa7.48□□□□□ -1.21
NUP98-215ENST00000529063 SGPL1O95470 568 aa7.48□□□□□ -1.21
NUP98-215ENST00000529063 INHAP05111 366 aa7.48□□□□□ -1.21
NUP98-215ENST00000529063 HOXD10P28358 340 aa7.48□□□□□ -1.21
NUP98-215ENST00000529063 UBXN2AP68543 259 aa7.48□□□□□ -1.21
NUP98-215ENST00000529063 IRF5Q13568 498 aa7.48□□□□□ -1.21
NUP98-215ENST00000529063 RASGRF1Q13972 1273 aa7.48□□□□□ -1.21
NUP98-215ENST00000529063 TREML2Q5T2D2 321 aa7.48□□□□□ -1.21
NUP98-215ENST00000529063 GADL1Q6ZQY3 521 aa7.48□□□□□ -1.21
NUP98-215ENST00000529063 DIS3LQ8TF46 1054 aaKnown RBP7.48□□□□□ -1.21
NUP98-215ENST00000529063 ADAM33Q9BZ11 813 aa7.48□□□□□ -1.21
NUP98-215ENST00000529063 PAK6Q9NQU5 681 aaPredicted RBP7.48□□□□□ -1.21
NUP98-215ENST00000529063 SLC45A1Q9Y2W3 748 aa7.48□□□□□ -1.21
NUP98-215ENST00000529063 COL2A1P02458 1487 aaPredicted RBP7.48□□□□□ -1.21
NUP98-215ENST00000529063 ANP32CO43423 234 aa7.47□□□□□ -1.21
NUP98-215ENST00000529063 ZEB1P37275 1124 aaPredicted RBP7.47□□□□□ -1.21
NUP98-215ENST00000529063 BTDP43251 543 aa7.47□□□□□ -1.21
NUP98-215ENST00000529063 RHBDL3P58872 404 aa7.47□□□□□ -1.21
NUP98-215ENST00000529063 RRP1BQ14684 758 aaKnown RBP7.47□□□□□ -1.21
NUP98-215ENST00000529063 CCDC102BQ68D86 513 aa7.47□□□□□ -1.21
NUP98-215ENST00000529063 LRCH3Q96II8 777 aa7.47□□□□□ -1.21
NUP98-215ENST00000529063 HTATIP2Q9BUP3 242 aa7.47□□□□□ -1.21
NUP98-215ENST00000529063 GDPD2Q9HCC8 539 aa7.47□□□□□ -1.21
NUP98-215ENST00000529063 BIN2Q9UBW5 565 aaPredicted RBP7.47□□□□□ -1.21
NUP98-215ENST00000529063 DENND2AQ9ULE3 1009 aa7.47□□□□□ -1.21
NUP98-215ENST00000529063 AGTPBP1Q9UPW5 1226 aa7.47□□□□□ -1.21
NUP98-215ENST00000529063 MROH7-TTC4A0A0A0MT08 1334 aa7.47□□□□□ -1.21
NUP98-215ENST00000529063 PDS5AQ29RF7 1337 aaKnown RBP7.47□□□□□ -1.21
NUP98-215ENST00000529063 A0A0C4DFX4 3053 aa7.46□□□□□ -1.21
NUP98-215ENST00000529063 RCCD1A6NED2 376 aa7.46□□□□□ -1.22
NUP98-215ENST00000529063 TRIM75PA6NK02 468 aa7.46□□□□□ -1.22
NUP98-215ENST00000529063 TNPO2O14787 897 aaKnown RBP7.46□□□□□ -1.22
NUP98-215ENST00000529063 CTNND1O60716 968 aaKnown RBP7.46□□□□□ -1.22
NUP98-215ENST00000529063 NUDT7P0C024 238 aa7.46□□□□□ -1.22
NUP98-215ENST00000529063 CD46P15529 392 aa7.46□□□□□ -1.22
NUP98-215ENST00000529063 IL15P40933 162 aaPredicted RBP7.46□□□□□ -1.22
NUP98-215ENST00000529063 SLFN5Q08AF3 891 aa7.46□□□□□ -1.22
NUP98-215ENST00000529063 TRIM32Q13049 653 aa7.46□□□□□ -1.22
NUP98-215ENST00000529063 PICALMQ13492 652 aa7.46□□□□□ -1.22
NUP98-215ENST00000529063 CSPP1Q1MSJ5 1256 aa7.46□□□□□ -1.22
NUP98-215ENST00000529063 TUSC1Q2TAM9 212 aa7.46□□□□□ -1.22
NUP98-215ENST00000529063 ALDH1L2Q3SY69 923 aa7.46□□□□□ -1.22
NUP98-215ENST00000529063 PI16Q6UXB8 463 aa7.46□□□□□ -1.22
NUP98-215ENST00000529063 FASTKD5Q7L8L6 764 aaKnown RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms