RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 CACNA1GO43497 2377 aa10.65□□□□□ -0.71
SSBP3-212ENST00000528930 XDHP47989 1333 aa10.64□□□□□ -0.71
SSBP3-212ENST00000528930 RARSP54136 660 aaKnown RBP10.64□□□□□ -0.71
SSBP3-212ENST00000528930 HNRNPUQ00839 825 aaKnown RBP eCLIP10.64□□□□□ -0.71
SSBP3-212ENST00000528930 SMC4Q9NTJ3 1288 aa10.64□□□□□ -0.71
SSBP3-212ENST00000528930 C9orf78Q9NZ63 289 aaPredicted RBP10.64□□□□□ -0.71
SSBP3-212ENST00000528930 BAHCC1Q9P281 2608 aa10.64□□□□□ -0.71
SSBP3-212ENST00000528930 SPTBN4Q9H254 2564 aa10.64□□□□□ -0.71
SSBP3-212ENST00000528930 FAM86C2PA6NEL3 165 aa10.63□□□□□ -0.71
SSBP3-212ENST00000528930 ATP2B4P23634 1241 aa10.63□□□□□ -0.71
SSBP3-212ENST00000528930 IGHMBP2P38935 993 aaKnown RBP10.63□□□□□ -0.71
SSBP3-212ENST00000528930 SNAPC2Q13487 334 aa10.63□□□□□ -0.71
SSBP3-212ENST00000528930 LMBR1LQ6UX01 489 aa10.63□□□□□ -0.71
SSBP3-212ENST00000528930 ANKRD23Q86SG2 305 aa10.63□□□□□ -0.71
SSBP3-212ENST00000528930 KIAA0825Q8IV33 1275 aa10.63□□□□□ -0.71
SSBP3-212ENST00000528930 ZNF516Q92618 1163 aa10.63□□□□□ -0.71
SSBP3-212ENST00000528930 SUCLG2Q96I99 432 aa10.63□□□□□ -0.71
SSBP3-212ENST00000528930 MTRQ99707 1265 aa10.63□□□□□ -0.71
SSBP3-212ENST00000528930 CXXC1Q9P0U4 656 aaPredicted RBP10.63□□□□□ -0.71
SSBP3-212ENST00000528930 NOB1Q9ULX3 412 aaKnown RBP10.63□□□□□ -0.71
SSBP3-212ENST00000528930 GBF1Q92538 1859 aa10.63□□□□□ -0.71
SSBP3-212ENST00000528930 ANKRD18BA2A2Z9 1011 aa10.62□□□□□ -0.71
SSBP3-212ENST00000528930 SMIM22K7EJ46 135 aa10.62□□□□□ -0.71
SSBP3-212ENST00000528930 IRF6O14896 467 aa10.62□□□□□ -0.71
SSBP3-212ENST00000528930 CCT4P50991 539 aaKnown RBP10.62□□□□□ -0.71
SSBP3-212ENST00000528930 IFIT5Q13325 482 aaKnown RBP10.62□□□□□ -0.71
SSBP3-212ENST00000528930 RASA3Q14644 834 aa10.62□□□□□ -0.71
SSBP3-212ENST00000528930 LAPTM4AQ15012 233 aa10.62□□□□□ -0.71
SSBP3-212ENST00000528930 DLGAP5Q15398 846 aa10.62□□□□□ -0.71
SSBP3-212ENST00000528930 PPP1R18Q6NYC8 613 aa10.62□□□□□ -0.71
SSBP3-212ENST00000528930 ERO1BQ86YB8 467 aa10.62□□□□□ -0.71
SSBP3-212ENST00000528930 USP44Q9H0E7 712 aa10.62□□□□□ -0.71
SSBP3-212ENST00000528930 CSADQ9Y600 493 aa10.62□□□□□ -0.71
SSBP3-212ENST00000528930 SNCAIPQ9Y6H5 919 aa10.62□□□□□ -0.71
SSBP3-212ENST00000528930 AOX1Q06278 1338 aa10.61□□□□□ -0.71
SSBP3-212ENST00000528930 REV3LO60673 3130 aa10.61□□□□□ -0.71
SSBP3-212ENST00000528930 CFAP54Q96N23 3096 aa10.61□□□□□ -0.71
SSBP3-212ENST00000528930 PDHXO00330 501 aa10.61□□□□□ -0.71
SSBP3-212ENST00000528930 RNF40O75150 1001 aa10.61□□□□□ -0.71
SSBP3-212ENST00000528930 PRSS12P56730 875 aa10.61□□□□□ -0.71
SSBP3-212ENST00000528930 CHRNDQ07001 517 aa10.61□□□□□ -0.71
SSBP3-212ENST00000528930 PPIL2Q13356 520 aa10.61□□□□□ -0.71
SSBP3-212ENST00000528930 RABL6Q3YEC7 729 aaPredicted RBP10.61□□□□□ -0.71
SSBP3-212ENST00000528930 PPM1EQ8WY54 764 aa10.61□□□□□ -0.71
SSBP3-212ENST00000528930 ZNF594Q96JF6 807 aaPredicted RBP10.61□□□□□ -0.71
SSBP3-212ENST00000528930 TEPSINQ96N21 525 aa10.61□□□□□ -0.71
SSBP3-212ENST00000528930 MPHOSPH8Q99549 860 aa10.61□□□□□ -0.71
SSBP3-212ENST00000528930 KCNH6Q9H252 994 aa10.61□□□□□ -0.71
SSBP3-212ENST00000528930 LEMD3Q9Y2U8 911 aa10.61□□□□□ -0.71
SSBP3-212ENST00000528930 CHMP3Q9Y3E7 222 aa10.61□□□□□ -0.71
SSBP3-212ENST00000528930 PCDHAC2Q9Y5I4 1007 aa10.61□□□□□ -0.71
SSBP3-212ENST00000528930 DNAH12Q6ZR08 3092 aa10.61□□□□□ -0.71
SSBP3-212ENST00000528930 A0A1B0GUL6 1792 aa10.6□□□□□ -0.71
SSBP3-212ENST00000528930 CLRN2A0PK11 232 aa10.6□□□□□ -0.71
SSBP3-212ENST00000528930 GRXCR2A6NFK2 248 aa10.6□□□□□ -0.71
SSBP3-212ENST00000528930 PRR33A8MZF0 331 aa10.6□□□□□ -0.71
SSBP3-212ENST00000528930 HMGCRP04035 888 aa10.6□□□□□ -0.71
SSBP3-212ENST00000528930 TXNRD3Q86VQ6 643 aa10.6□□□□□ -0.71
SSBP3-212ENST00000528930 ANKRD44Q8N8A2 993 aa10.6□□□□□ -0.71
SSBP3-212ENST00000528930 ARHGAP45Q92619 1136 aa10.6□□□□□ -0.71
SSBP3-212ENST00000528930 ANKRD2Q9GZV1 360 aa10.6□□□□□ -0.71
SSBP3-212ENST00000528930 BICC1Q9H694 974 aaKnown RBP10.6□□□□□ -0.71
SSBP3-212ENST00000528930 HMX1Q9NP08 348 aaPredicted RBP10.6□□□□□ -0.71
SSBP3-212ENST00000528930 PNMA3Q9UL41 463 aa10.6□□□□□ -0.71
SSBP3-212ENST00000528930 KMT2BQ9UMN6 2715 aaPredicted RBP10.6□□□□□ -0.71
SSBP3-212ENST00000528930 XIRP2A4UGR9 3374 aa10.6□□□□□ -0.71
SSBP3-212ENST00000528930 ZBED9Q6R2W3 1325 aa10.59□□□□□ -0.71
SSBP3-212ENST00000528930 SNAP23O00161 211 aa10.59□□□□□ -0.71
SSBP3-212ENST00000528930 TAF5LO75529 589 aa10.59□□□□□ -0.71
SSBP3-212ENST00000528930 BCAR3O75815 825 aa10.59□□□□□ -0.71
SSBP3-212ENST00000528930 DNAJB2P25686 324 aa10.59□□□□□ -0.71
SSBP3-212ENST00000528930 KLRK1P26718 216 aa10.59□□□□□ -0.71
SSBP3-212ENST00000528930 MOGSQ13724 837 aa10.59□□□□□ -0.71
SSBP3-212ENST00000528930 CCDC57Q2TAC2 916 aa10.59□□□□□ -0.71
SSBP3-212ENST00000528930 TATDN2Q93075 761 aa10.59□□□□□ -0.71
SSBP3-212ENST00000528930 FBXL18Q96ME1 805 aa10.59□□□□□ -0.71
SSBP3-212ENST00000528930 GAS2L1Q99501 681 aaPredicted RBP10.59□□□□□ -0.71
SSBP3-212ENST00000528930 API5Q9BZZ5 524 aaKnown RBP10.59□□□□□ -0.71
SSBP3-212ENST00000528930 ZNF576Q9H609 170 aa10.59□□□□□ -0.71
SSBP3-212ENST00000528930 USP34Q70CQ2 3546 aa10.59□□□□□ -0.71
SSBP3-212ENST00000528930 WDFY4Q6ZS81 3184 aa10.59□□□□□ -0.71
SSBP3-212ENST00000528930 PI4K2BG5E9Z4 385 aa10.58□□□□□ -0.72
SSBP3-212ENST00000528930 TNPO2O14787 897 aaKnown RBP10.58□□□□□ -0.72
SSBP3-212ENST00000528930 MYO1BO43795 1136 aa10.58□□□□□ -0.72
SSBP3-212ENST00000528930 PDE3AQ14432 1141 aa10.58□□□□□ -0.72
SSBP3-212ENST00000528930 LDHAL6AQ6ZMR3 332 aa10.58□□□□□ -0.72
SSBP3-212ENST00000528930 PRMT6Q96LA8 375 aaPredicted RBP10.58□□□□□ -0.72
SSBP3-212ENST00000528930 PARK7Q99497 189 aaKnown RBP10.58□□□□□ -0.72
SSBP3-212ENST00000528930 PUS3Q9BZE2 481 aaKnown RBP10.58□□□□□ -0.72
SSBP3-212ENST00000528930 COA1Q9GZY4 146 aa10.58□□□□□ -0.72
SSBP3-212ENST00000528930 IL21Q9HBE4 155 aa10.58□□□□□ -0.72
SSBP3-212ENST00000528930 VEZTQ9HBM0 779 aa10.58□□□□□ -0.72
SSBP3-212ENST00000528930 KIF16BQ96L93 1317 aa10.58□□□□□ -0.72
SSBP3-212ENST00000528930 KCNQ1P51787 676 aa10.57□□□□□ -0.72
SSBP3-212ENST00000528930 MAP3K21Q5TCX8 1036 aa10.57□□□□□ -0.72
SSBP3-212ENST00000528930 TTLL5Q6EMB2 1281 aa10.57□□□□□ -0.72
SSBP3-212ENST00000528930 C15orf52Q6ZUT6 534 aaKnown RBP10.57□□□□□ -0.72
SSBP3-212ENST00000528930 CNNM1Q9NRU3 951 aa10.57□□□□□ -0.72
SSBP3-212ENST00000528930 TNNQ9UQP3 1299 aa10.57□□□□□ -0.72
SSBP3-212ENST00000528930 PHIPQ8WWQ0 1821 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms