RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-208ENST00000528475 HOMER1Q86YM7 354 aa26.79■■□□□ 1.88
GSDMD-208ENST00000528475 SPATA20Q8TB22 786 aa26.79■■□□□ 1.88
GSDMD-208ENST00000528475 CT47A1Q5JQC4 288 aaPredicted RBP26.78■■□□□ 1.88
GSDMD-208ENST00000528475 CCDC87Q9NVE4 849 aa26.78■■□□□ 1.88
GSDMD-208ENST00000528475 LRP2BPQ9P2M1 347 aa26.78■■□□□ 1.88
GSDMD-208ENST00000528475 DOT1LQ8TEK3 1739 aa26.78■■□□□ 1.88
GSDMD-208ENST00000528475 ACTN4O43707 911 aaKnown RBP26.78■■□□□ 1.88
GSDMD-208ENST00000528475 SYTL4Q96C24 671 aaPredicted RBP26.78■■□□□ 1.88
GSDMD-208ENST00000528475 UBAC1Q9BSL1 405 aa26.78■■□□□ 1.88
GSDMD-208ENST00000528475 PRR29P0C7W0 189 aa26.77■■□□□ 1.88
GSDMD-208ENST00000528475 H2AFXP16104 143 aaPredicted RBP26.77■■□□□ 1.88
GSDMD-208ENST00000528475 NR5A1Q13285 461 aa26.77■■□□□ 1.88
GSDMD-208ENST00000528475 SRRTQ9BXP5 876 aaKnown RBP26.77■■□□□ 1.88
GSDMD-208ENST00000528475 ESR2Q92731 530 aa26.77■■□□□ 1.88
GSDMD-208ENST00000528475 NFE2L3Q9Y4A8 694 aa26.77■■□□□ 1.88
GSDMD-208ENST00000528475 CAMTA2O94983 1202 aa26.76■■□□□ 1.87
GSDMD-208ENST00000528475 ZNF804BA4D1E1 1349 aa26.76■■□□□ 1.87
GSDMD-208ENST00000528475 GOLGA6L9A6NEM1 432 aa26.75■■□□□ 1.87
GSDMD-208ENST00000528475 NTSR2O95665 410 aa26.75■■□□□ 1.87
GSDMD-208ENST00000528475 CYP7A1P22680 504 aa26.75■■□□□ 1.87
GSDMD-208ENST00000528475 ERCC5P28715 1186 aaPredicted RBP26.75■■□□□ 1.87
GSDMD-208ENST00000528475 FMR1Q06787 632 aaKnown RBP eCLIP26.75■■□□□ 1.87
GSDMD-208ENST00000528475 KRT222Q8N1A0 295 aa26.75■■□□□ 1.87
GSDMD-208ENST00000528475 MIGA1Q8NAN2 632 aa26.75■■□□□ 1.87
GSDMD-208ENST00000528475 AATFQ9NY61 560 aaKnown RBP eCLIP26.75■■□□□ 1.87
GSDMD-208ENST00000528475 DNAI1Q9UI46 699 aa26.75■■□□□ 1.87
GSDMD-208ENST00000528475 CICQ96RK0 1608 aaPredicted RBP26.75■■□□□ 1.87
GSDMD-208ENST00000528475 STX10O60499 249 aa26.75■■□□□ 1.87
GSDMD-208ENST00000528475 XBP1P17861 261 aa26.75■■□□□ 1.87
GSDMD-208ENST00000528475 CHRNDQ07001 517 aa26.75■■□□□ 1.87
GSDMD-208ENST00000528475 NUTM2AQ8IVF1 878 aaPredicted RBP26.75■■□□□ 1.87
GSDMD-208ENST00000528475 OXER1Q8TDS5 423 aa26.75■■□□□ 1.87
GSDMD-208ENST00000528475 NUP133Q8WUM0 1156 aa26.75■■□□□ 1.87
GSDMD-208ENST00000528475 KIF20AO95235 890 aa26.74■■□□□ 1.87
GSDMD-208ENST00000528475 SPECC1LQ69YQ0 1117 aa26.74■■□□□ 1.87
GSDMD-208ENST00000528475 TNKSO95271 1327 aa26.74■■□□□ 1.87
GSDMD-208ENST00000528475 PLCD1P51178 756 aa26.74■■□□□ 1.87
GSDMD-208ENST00000528475 ERCC6LQ2NKX8 1250 aa26.74■■□□□ 1.87
GSDMD-208ENST00000528475 CCDC34Q96HJ3 373 aa26.74■■□□□ 1.87
GSDMD-208ENST00000528475 CDC5LQ99459 802 aaKnown RBP26.74■■□□□ 1.87
GSDMD-208ENST00000528475 BCL11BQ9C0K0 894 aaPredicted RBP26.74■■□□□ 1.87
GSDMD-208ENST00000528475 CSRNP2Q9H175 543 aa26.74■■□□□ 1.87
GSDMD-208ENST00000528475 CABP5Q9NP86 173 aa26.74■■□□□ 1.87
GSDMD-208ENST00000528475 MYH6P13533 1939 aa26.73■■□□□ 1.87
GSDMD-208ENST00000528475 CMTR1Q8N1G2 835 aaKnown RBP26.73■■□□□ 1.87
GSDMD-208ENST00000528475 CCDC82Q8N4S0 544 aa26.73■■□□□ 1.87
GSDMD-208ENST00000528475 BAG1Q99933 345 aaPredicted RBP26.73■■□□□ 1.87
GSDMD-208ENST00000528475 PPP2R2CQ9Y2T4 447 aa26.73■■□□□ 1.87
GSDMD-208ENST00000528475 COL16A1Q07092 1604 aaPredicted RBP26.72■■□□□ 1.87
GSDMD-208ENST00000528475 MAGEB6P1A0A0J9YX57 407 aa26.72■■□□□ 1.87
GSDMD-208ENST00000528475 CRKLP46109 303 aaKnown RBP26.72■■□□□ 1.87
GSDMD-208ENST00000528475 TC2NQ8N9U0 490 aa26.72■■□□□ 1.87
GSDMD-208ENST00000528475 PHF20Q9BVI0 1012 aa26.72■■□□□ 1.87
GSDMD-208ENST00000528475 DUOX1Q9NRD9 1551 aa26.72■■□□□ 1.87
GSDMD-208ENST00000528475 VWA3AA6NCI4 1184 aa26.72■■□□□ 1.87
GSDMD-208ENST00000528475 TRIM75PA6NK02 468 aa26.72■■□□□ 1.87
GSDMD-208ENST00000528475 PRPF3O43395 683 aaKnown RBP26.72■■□□□ 1.87
GSDMD-208ENST00000528475 BMP15O95972 392 aa26.72■■□□□ 1.87
GSDMD-208ENST00000528475 CDK11BP21127 795 aaKnown RBP26.72■■□□□ 1.87
GSDMD-208ENST00000528475 AKAP17AQ02040 695 aaKnown RBP26.72■■□□□ 1.87
GSDMD-208ENST00000528475 FUT2Q10981 343 aa26.72■■□□□ 1.87
GSDMD-208ENST00000528475 PKN1Q16512 942 aa26.72■■□□□ 1.87
GSDMD-208ENST00000528475 ADGRA1Q86SQ6 560 aa26.72■■□□□ 1.87
GSDMD-208ENST00000528475 MED15Q96RN5 788 aa26.72■■□□□ 1.87
GSDMD-208ENST00000528475 PCP11498 1178 aaKnown RBP26.71■■□□□ 1.87
GSDMD-208ENST00000528475 LRRN4CLQ8ND94 238 aa26.71■■□□□ 1.87
GSDMD-208ENST00000528475 SHISA4Q96DD7 197 aa26.71■■□□□ 1.87
GSDMD-208ENST00000528475 KRT2P35908 639 aa26.7■■□□□ 1.87
GSDMD-208ENST00000528475 GOLGA8FQ08AF8 430 aa26.7■■□□□ 1.87
GSDMD-208ENST00000528475 GOLGA8DPQ0D2H9 430 aa26.7■■□□□ 1.87
GSDMD-208ENST00000528475 NR1I3Q14994 352 aa26.7■■□□□ 1.87
GSDMD-208ENST00000528475 SH3RF1Q7Z6J0 888 aa26.7■■□□□ 1.87
GSDMD-208ENST00000528475 RIOK1Q9BRS2 568 aaKnown RBP26.7■■□□□ 1.87
GSDMD-208ENST00000528475 RBM28Q9NW13 759 aaKnown RBP26.7■■□□□ 1.87
GSDMD-208ENST00000528475 DLEC1Q9Y238 1755 aa26.7■■□□□ 1.87
GSDMD-208ENST00000528475 MINDY4BA8MYZ0 360 aa26.7■■□□□ 1.86
GSDMD-208ENST00000528475 FGRP09769 529 aa26.7■■□□□ 1.86
GSDMD-208ENST00000528475 SDR42E1Q8WUS8 393 aa26.7■■□□□ 1.86
GSDMD-208ENST00000528475 ZSCAN10Q96SZ4 725 aaPredicted RBP26.7■■□□□ 1.86
GSDMD-208ENST00000528475 BRIP1Q9BX63 1249 aa26.7■■□□□ 1.86
GSDMD-208ENST00000528475 GNL3LQ9NVN8 582 aaKnown RBP26.7■■□□□ 1.86
GSDMD-208ENST00000528475 USP49Q70CQ1 688 aa26.69■■□□□ 1.86
GSDMD-208ENST00000528475 GRAMD1CQ8IYS0 662 aa26.69■■□□□ 1.86
GSDMD-208ENST00000528475 ENAHQ8N8S7 591 aaPredicted RBP26.69■■□□□ 1.86
GSDMD-208ENST00000528475 FERMT2Q96AC1 680 aa26.69■■□□□ 1.86
GSDMD-208ENST00000528475 ZNF446Q9NWS9 450 aa26.69■■□□□ 1.86
GSDMD-208ENST00000528475 RAI14Q9P0K7 980 aa26.69■■□□□ 1.86
GSDMD-208ENST00000528475 CACNA1SQ13698 1873 aa26.69■■□□□ 1.86
GSDMD-208ENST00000528475 KAT6BQ8WYB5 2073 aa26.69■■□□□ 1.86
GSDMD-208ENST00000528475 A0A1B0GTH6 734 aa26.69■■□□□ 1.86
GSDMD-208ENST00000528475 FANCGO15287 622 aa26.69■■□□□ 1.86
GSDMD-208ENST00000528475 ZNF827Q17R98 1081 aa26.69■■□□□ 1.86
GSDMD-208ENST00000528475 NIP7Q9Y221 180 aaKnown RBP eCLIP26.69■■□□□ 1.86
GSDMD-208ENST00000528475 PARP3Q9Y6F1 533 aa26.69■■□□□ 1.86
GSDMD-208ENST00000528475 A0A1B0GUL6 1792 aa26.69■■□□□ 1.86
GSDMD-208ENST00000528475 SLFN14P0C7P3 912 aa26.68■■□□□ 1.86
GSDMD-208ENST00000528475 CALM1P0DP23 149 aa26.68■■□□□ 1.86
GSDMD-208ENST00000528475 CALM2P0DP24 149 aa26.68■■□□□ 1.86
GSDMD-208ENST00000528475 CALM3P0DP25 149 aa26.68■■□□□ 1.86
GSDMD-208ENST00000528475 TRMT44Q8IYL2 757 aaKnown RBP26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms