RNA–Protein interactions for RNA: ENST00000528276.1

CHEK1-210, Transcript of checkpoint kinase 1, humanhuman

TSL 2

Gene CHEK1, Length 1,814 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-210ENST00000528276 ATL3Q6DD88 541 aa16.5■□□□□ 0.23
CHEK1-210ENST00000528276 CCDC82Q8N4S0 544 aa16.5■□□□□ 0.23
CHEK1-210ENST00000528276 KAT14Q9H8E8 782 aa16.5■□□□□ 0.23
CHEK1-210ENST00000528276 KCNQ5Q9NR82 932 aa16.5■□□□□ 0.23
CHEK1-210ENST00000528276 PIM2Q9P1W9 311 aa16.5■□□□□ 0.23
CHEK1-210ENST00000528276 PPP1R1BQ9UD71 204 aaPredicted RBP16.5■□□□□ 0.23
CHEK1-210ENST00000528276 ISY1Q9ULR0 285 aaKnown RBP16.5■□□□□ 0.23
CHEK1-210ENST00000528276 ROBO3Q96MS0 1386 aa16.5■□□□□ 0.23
CHEK1-210ENST00000528276 STK36Q9NRP7 1315 aa16.5■□□□□ 0.23
CHEK1-210ENST00000528276 CRKP46108 304 aa16.49■□□□□ 0.23
CHEK1-210ENST00000528276 NTRK3Q16288 839 aa16.49■□□□□ 0.23
CHEK1-210ENST00000528276 FAM217BQ9NTX9 383 aaPredicted RBP16.49■□□□□ 0.23
CHEK1-210ENST00000528276 NID2Q14112 1375 aa16.49■□□□□ 0.23
CHEK1-210ENST00000528276 ZSCAN23Q3MJ62 389 aa16.49■□□□□ 0.23
CHEK1-210ENST00000528276 DACT2Q5SW24 774 aa16.49■□□□□ 0.23
CHEK1-210ENST00000528276 OTUD7BQ6GQQ9 843 aa16.49■□□□□ 0.23
CHEK1-210ENST00000528276 BRAPQ7Z569 592 aa16.49■□□□□ 0.23
CHEK1-210ENST00000528276 LARGE2Q8N3Y3 721 aa16.49■□□□□ 0.23
CHEK1-210ENST00000528276 MRIQ9BWK5 157 aa16.49■□□□□ 0.23
CHEK1-210ENST00000528276 ELP1O95163 1332 aa16.48■□□□□ 0.23
CHEK1-210ENST00000528276 NMT2O60551 498 aa16.48■□□□□ 0.23
CHEK1-210ENST00000528276 DEXIO95424 95 aa16.48■□□□□ 0.23
CHEK1-210ENST00000528276 XBP1P17861 261 aa16.48■□□□□ 0.23
CHEK1-210ENST00000528276 CDK8P49336 464 aa16.48■□□□□ 0.23
CHEK1-210ENST00000528276 HDLBPQ00341 1268 aaKnown RBP16.48■□□□□ 0.23
CHEK1-210ENST00000528276 SAFBQ15424 915 aaKnown RBP eCLIP16.48■□□□□ 0.23
CHEK1-210ENST00000528276 C16orf86Q6ZW13 317 aa16.48■□□□□ 0.23
CHEK1-210ENST00000528276 DGKHQ86XP1 1220 aa16.48■□□□□ 0.23
CHEK1-210ENST00000528276 PSMD1Q99460 953 aa16.48■□□□□ 0.23
CHEK1-210ENST00000528276 HLA-DOAP06340 250 aa16.47■□□□□ 0.23
CHEK1-210ENST00000528276 KIF5BP33176 963 aa16.47■□□□□ 0.23
CHEK1-210ENST00000528276 CEBPZQ03701 1054 aaKnown RBP16.47■□□□□ 0.23
CHEK1-210ENST00000528276 CRACR2BQ8N4Y2 399 aaPredicted RBP16.47■□□□□ 0.23
CHEK1-210ENST00000528276 ZDHHC15Q96MV8 337 aa16.47■□□□□ 0.23
CHEK1-210ENST00000528276 RBM27Q9P2N5 1060 aaKnown RBP16.47■□□□□ 0.23
CHEK1-210ENST00000528276 KIAA1551Q9HCM1 1747 aa16.47■□□□□ 0.23
CHEK1-210ENST00000528276 R3HDM1Q15032 1099 aaKnown RBP16.47■□□□□ 0.23
CHEK1-210ENST00000528276 DALRD3Q5D0E6 543 aaKnown RBP16.47■□□□□ 0.23
CHEK1-210ENST00000528276 CDC42EP5Q6NZY7 148 aa16.47■□□□□ 0.23
CHEK1-210ENST00000528276 KLHL34Q8N239 644 aa16.47■□□□□ 0.23
CHEK1-210ENST00000528276 SLC44A5Q8NCS7 719 aa16.47■□□□□ 0.23
CHEK1-210ENST00000528276 LEO1Q8WVC0 666 aaPredicted RBP16.47■□□□□ 0.23
CHEK1-210ENST00000528276 SERPINA10Q9UK55 444 aa16.47■□□□□ 0.23
CHEK1-210ENST00000528276 STX8Q9UNK0 236 aa16.47■□□□□ 0.23
CHEK1-210ENST00000528276 TROAPQ12815 778 aa16.46■□□□□ 0.23
CHEK1-210ENST00000528276 KRT40Q6A162 431 aa16.46■□□□□ 0.23
CHEK1-210ENST00000528276 APOBEC3HQ6NTF7 200 aaKnown RBP16.46■□□□□ 0.23
CHEK1-210ENST00000528276 CMTR1Q8N1G2 835 aaKnown RBP16.46■□□□□ 0.23
CHEK1-210ENST00000528276 RNF26Q9BY78 433 aaPredicted RBP16.46■□□□□ 0.23
CHEK1-210ENST00000528276 VPS33BQ9H267 617 aa16.46■□□□□ 0.23
CHEK1-210ENST00000528276 TCP11L1Q9NUJ3 509 aa16.46■□□□□ 0.23
CHEK1-210ENST00000528276 SLX4Q8IY92 1834 aa16.46■□□□□ 0.23
CHEK1-210ENST00000528276 WDHD1O75717 1129 aaPredicted RBP16.45■□□□□ 0.22
CHEK1-210ENST00000528276 RASA1P20936 1047 aa16.45■□□□□ 0.22
CHEK1-210ENST00000528276 KCNA3P22001 575 aa16.45■□□□□ 0.22
CHEK1-210ENST00000528276 ZNF277Q9NRM2 450 aaPredicted RBP16.45■□□□□ 0.22
CHEK1-210ENST00000528276 TMEM63CQ9P1W3 806 aa16.45■□□□□ 0.22
CHEK1-210ENST00000528276 MYO3BQ8WXR4 1341 aa16.45■□□□□ 0.22
CHEK1-210ENST00000528276 LETM1O95202 739 aaPredicted RBP16.45■□□□□ 0.22
CHEK1-210ENST00000528276 SF3A1Q15459 793 aaKnown RBP16.45■□□□□ 0.22
CHEK1-210ENST00000528276 PNMA1Q8ND90 353 aa16.45■□□□□ 0.22
CHEK1-210ENST00000528276 BICD2Q8TD16 824 aa16.45■□□□□ 0.22
CHEK1-210ENST00000528276 AIFM3Q96NN9 605 aa16.45■□□□□ 0.22
CHEK1-210ENST00000528276 GJB4Q9NTQ9 266 aa16.45■□□□□ 0.22
CHEK1-210ENST00000528276 SWAP70Q9UH65 585 aa16.45■□□□□ 0.22
CHEK1-210ENST00000528276 BAZ2AQ9UIF9 1905 aaKnown RBP16.45■□□□□ 0.22
CHEK1-210ENST00000528276 CHD4Q14839 1912 aa16.44■□□□□ 0.22
CHEK1-210ENST00000528276 MRE11P49959 708 aa16.44■□□□□ 0.22
CHEK1-210ENST00000528276 KIF23Q02241 960 aaPredicted RBP16.44■□□□□ 0.22
CHEK1-210ENST00000528276 CCDC183Q5T5S1 534 aa16.44■□□□□ 0.22
CHEK1-210ENST00000528276 NIM1KQ8IY84 436 aa16.44■□□□□ 0.22
CHEK1-210ENST00000528276 OGFOD1Q8N543 542 aa16.44■□□□□ 0.22
CHEK1-210ENST00000528276 TRIM34Q9BYJ4 488 aa16.44■□□□□ 0.22
CHEK1-210ENST00000528276 OSBPL5Q9H0X9 879 aaPredicted RBP16.44■□□□□ 0.22
CHEK1-210ENST00000528276 IL17RBQ9NRM6 502 aa16.44■□□□□ 0.22
CHEK1-210ENST00000528276 SERPINB13Q9UIV8 391 aa16.44■□□□□ 0.22
CHEK1-210ENST00000528276 HDAC9Q9UKV0 1011 aa16.44■□□□□ 0.22
CHEK1-210ENST00000528276 MYH2Q9UKX2 1941 aa16.44■□□□□ 0.22
CHEK1-210ENST00000528276 GNAQP50148 359 aa16.43■□□□□ 0.22
CHEK1-210ENST00000528276 ZNF445P59923 1031 aa16.43■□□□□ 0.22
CHEK1-210ENST00000528276 NBPF11Q86T75 865 aa16.43■□□□□ 0.22
CHEK1-210ENST00000528276 ZSCAN29Q8IWY8 852 aaPredicted RBP16.43■□□□□ 0.22
CHEK1-210ENST00000528276 ANKS1AQ92625 1134 aa16.43■□□□□ 0.22
CHEK1-210ENST00000528276 DHX36Q9H2U1 1008 aaKnown RBP16.43■□□□□ 0.22
CHEK1-210ENST00000528276 SYCE3A1L190 88 aa16.42■□□□□ 0.22
CHEK1-210ENST00000528276 PRPF3O43395 683 aaKnown RBP16.42■□□□□ 0.22
CHEK1-210ENST00000528276 STK38Q15208 465 aa16.42■□□□□ 0.22
CHEK1-210ENST00000528276 RCSD1Q6JBY9 416 aa16.42■□□□□ 0.22
CHEK1-210ENST00000528276 TMTC3Q6ZXV5 915 aa16.42■□□□□ 0.22
CHEK1-210ENST00000528276 NEDD1Q8NHV4 660 aa16.42■□□□□ 0.22
CHEK1-210ENST00000528276 MAP3K14Q99558 947 aa16.42■□□□□ 0.22
CHEK1-210ENST00000528276 DDX4Q9NQI0 724 aaKnown RBP16.42■□□□□ 0.22
CHEK1-210ENST00000528276 V9GY48 417 aaPredicted RBP16.42■□□□□ 0.22
CHEK1-210ENST00000528276 FSD2A1L4K1 749 aa16.42■□□□□ 0.22
CHEK1-210ENST00000528276 YDJCA8MPS7 323 aa16.42■□□□□ 0.22
CHEK1-210ENST00000528276 RAD17O75943 681 aa16.42■□□□□ 0.22
CHEK1-210ENST00000528276 PLEKHA8P1O95397 391 aa16.42■□□□□ 0.22
CHEK1-210ENST00000528276 ME1P48163 572 aa16.42■□□□□ 0.22
CHEK1-210ENST00000528276 MYSM1Q5VVJ2 828 aa16.42■□□□□ 0.22
CHEK1-210ENST00000528276 RSBN1LQ6PCB5 846 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms