RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 DHX8Q14562 1220 aaKnown RBP17.67■□□□□ 0.42
USH1C-207ENST00000527720 HOOK1Q9UJC3 728 aaKnown RBP17.67■□□□□ 0.42
USH1C-207ENST00000527720 KCNH3Q9ULD8 1083 aa17.67■□□□□ 0.42
USH1C-207ENST00000527720 KCNJ14Q9UNX9 436 aa17.67■□□□□ 0.42
USH1C-207ENST00000527720 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.67■□□□□ 0.42
USH1C-207ENST00000527720 PTPREP23469 700 aa17.66■□□□□ 0.42
USH1C-207ENST00000527720 GSDMDP57764 484 aa17.66■□□□□ 0.42
USH1C-207ENST00000527720 SBK1Q52WX2 424 aa17.66■□□□□ 0.42
USH1C-207ENST00000527720 SPTY2D1Q68D10 685 aaPredicted RBP17.66■□□□□ 0.42
USH1C-207ENST00000527720 PTF1AQ7RTS3 328 aa17.66■□□□□ 0.42
USH1C-207ENST00000527720 ARPP21Q9UBL0 812 aaPredicted RBP17.66■□□□□ 0.42
USH1C-207ENST00000527720 TM4SF1P30408 202 aa17.65■□□□□ 0.42
USH1C-207ENST00000527720 HSP90AA2PQ14568 343 aaPredicted RBP17.65■□□□□ 0.42
USH1C-207ENST00000527720 KRBA2Q6ZNG9 492 aa17.65■□□□□ 0.42
USH1C-207ENST00000527720 UBE2Q2Q8WVN8 375 aa17.65■□□□□ 0.42
USH1C-207ENST00000527720 CLIC6Q96NY7 704 aa17.65■□□□□ 0.42
USH1C-207ENST00000527720 FAM13BQ9NYF5 915 aa17.65■□□□□ 0.42
USH1C-207ENST00000527720 USP17L12C9JPN9 530 aa17.65■□□□□ 0.42
USH1C-207ENST00000527720 USP17L21D6R901 530 aa17.65■□□□□ 0.42
USH1C-207ENST00000527720 KLRK1P26718 216 aa17.65■□□□□ 0.42
USH1C-207ENST00000527720 FUT2Q10981 343 aa17.65■□□□□ 0.42
USH1C-207ENST00000527720 ARHGEF1Q92888 912 aaKnown RBP17.65■□□□□ 0.42
USH1C-207ENST00000527720 DCP1AQ9NPI6 582 aaPredicted RBP17.65■□□□□ 0.42
USH1C-207ENST00000527720 IRS2Q9Y4H2 1338 aa17.65■□□□□ 0.42
USH1C-207ENST00000527720 MYO1BO43795 1136 aa17.64■□□□□ 0.41
USH1C-207ENST00000527720 TROAPQ12815 778 aa17.64■□□□□ 0.41
USH1C-207ENST00000527720 OSBPL5Q9H0X9 879 aaPredicted RBP17.64■□□□□ 0.41
USH1C-207ENST00000527720 FBXO2Q9UK22 296 aaPredicted RBP17.64■□□□□ 0.41
USH1C-207ENST00000527720 BIN1O00499 593 aa17.64■□□□□ 0.41
USH1C-207ENST00000527720 NCAPHQ15003 741 aa17.64■□□□□ 0.41
USH1C-207ENST00000527720 CCDC82Q8N4S0 544 aa17.64■□□□□ 0.41
USH1C-207ENST00000527720 CNNM3Q8NE01 707 aa17.64■□□□□ 0.41
USH1C-207ENST00000527720 FBXW7Q969H0 707 aa17.64■□□□□ 0.41
USH1C-207ENST00000527720 MAP7D2Q96T17 732 aa17.64■□□□□ 0.41
USH1C-207ENST00000527720 TAOK2Q9UL54 1235 aa17.64■□□□□ 0.41
USH1C-207ENST00000527720 SRPRBQ9Y5M8 271 aaKnown RBP17.64■□□□□ 0.41
USH1C-207ENST00000527720 CYP2D7A0A087X1C5 515 aa17.63■□□□□ 0.41
USH1C-207ENST00000527720 PKN1Q16512 942 aa17.63■□□□□ 0.41
USH1C-207ENST00000527720 SMIM5Q71RC9 77 aa17.63■□□□□ 0.41
USH1C-207ENST00000527720 CMTR1Q8N1G2 835 aaKnown RBP17.63■□□□□ 0.41
USH1C-207ENST00000527720 PHF20Q9BVI0 1012 aa17.63■□□□□ 0.41
USH1C-207ENST00000527720 AATFQ9NY61 560 aaKnown RBP eCLIP17.63■□□□□ 0.41
USH1C-207ENST00000527720 TFCP2L1Q9NZI6 479 aa17.63■□□□□ 0.41
USH1C-207ENST00000527720 USP21Q9UK80 565 aa17.63■□□□□ 0.41
USH1C-207ENST00000527720 SPATA31A6Q5VVP1 1343 aa17.63■□□□□ 0.41
USH1C-207ENST00000527720 NR5A1Q13285 461 aa17.63■□□□□ 0.41
USH1C-207ENST00000527720 LONRF3Q496Y0 759 aa17.63■□□□□ 0.41
USH1C-207ENST00000527720 MTERF4Q7Z6M4 381 aaKnown RBP17.63■□□□□ 0.41
USH1C-207ENST00000527720 METTL16Q86W50 562 aaKnown RBP17.63■□□□□ 0.41
USH1C-207ENST00000527720 LEMD3Q9Y2U8 911 aa17.63■□□□□ 0.41
USH1C-207ENST00000527720 SMIM22K7EJ46 135 aa17.62■□□□□ 0.41
USH1C-207ENST00000527720 BMP15O95972 392 aa17.62■□□□□ 0.41
USH1C-207ENST00000527720 PRDX5P30044 214 aa17.62■□□□□ 0.41
USH1C-207ENST00000527720 KRT2P35908 639 aa17.62■□□□□ 0.41
USH1C-207ENST00000527720 PDE4BQ07343 736 aa17.62■□□□□ 0.41
USH1C-207ENST00000527720 PNOCQ13519 176 aa17.62■□□□□ 0.41
USH1C-207ENST00000527720 KANK3Q6NY19 840 aa17.61■□□□□ 0.41
USH1C-207ENST00000527720 OLFM4Q6UX06 510 aa17.61■□□□□ 0.41
USH1C-207ENST00000527720 TMTC3Q6ZXV5 915 aa17.61■□□□□ 0.41
USH1C-207ENST00000527720 BRMS1Q9HCU9 246 aa17.61■□□□□ 0.41
USH1C-207ENST00000527720 PCDHB6Q9Y5E3 794 aa17.61■□□□□ 0.41
USH1C-207ENST00000527720 RFC4P35249 363 aa17.61■□□□□ 0.41
USH1C-207ENST00000527720 MDM2Q00987 491 aaPredicted RBP17.61■□□□□ 0.41
USH1C-207ENST00000527720 GRAPQ13588 217 aa17.61■□□□□ 0.41
USH1C-207ENST00000527720 WDR66Q8TBY9 1149 aa17.61■□□□□ 0.41
USH1C-207ENST00000527720 GRAPLQ8TC17 118 aaPredicted RBP17.61■□□□□ 0.41
USH1C-207ENST00000527720 PDCL3Q9H2J4 239 aa17.61■□□□□ 0.41
USH1C-207ENST00000527720 KCND1Q9NSA2 647 aa17.61■□□□□ 0.41
USH1C-207ENST00000527720 NAV1Q8NEY1 1877 aa17.61■□□□□ 0.41
USH1C-207ENST00000527720 UBAP1LF5GYI3 381 aa17.6■□□□□ 0.41
USH1C-207ENST00000527720 PRDM1O75626 825 aa17.6■□□□□ 0.41
USH1C-207ENST00000527720 MYL5Q02045 173 aa17.6■□□□□ 0.41
USH1C-207ENST00000527720 TRAPPC3LQ5T215 181 aa17.6■□□□□ 0.41
USH1C-207ENST00000527720 NT5DC1Q5TFE4 455 aa17.6■□□□□ 0.41
USH1C-207ENST00000527720 DZIP1Q86YF9 867 aaKnown RBP17.6■□□□□ 0.41
USH1C-207ENST00000527720 CTCFLQ8NI51 663 aaPredicted RBP17.6■□□□□ 0.41
USH1C-207ENST00000527720 OXER1Q8TDS5 423 aa17.6■□□□□ 0.41
USH1C-207ENST00000527720 XPO4Q9C0E2 1151 aaKnown RBP17.6■□□□□ 0.41
USH1C-207ENST00000527720 CABP5Q9NP86 173 aa17.6■□□□□ 0.41
USH1C-207ENST00000527720 TRIM75PA6NK02 468 aa17.6■□□□□ 0.41
USH1C-207ENST00000527720 NPHP1O15259 732 aa17.6■□□□□ 0.41
USH1C-207ENST00000527720 FILIP1Q7Z7B0 1213 aa17.6■□□□□ 0.41
USH1C-207ENST00000527720 CCDC150Q8NCX0 1101 aa17.6■□□□□ 0.41
USH1C-207ENST00000527720 IFNKQ9P0W0 207 aa17.6■□□□□ 0.41
USH1C-207ENST00000527720 UBR3Q6ZT12 1888 aa17.6■□□□□ 0.41
USH1C-207ENST00000527720 SMC2O95347 1197 aa17.59■□□□□ 0.41
USH1C-207ENST00000527720 PLEKHA8P1O95397 391 aa17.59■□□□□ 0.41
USH1C-207ENST00000527720 SKILP12757 684 aa17.59■□□□□ 0.41
USH1C-207ENST00000527720 ADRA2BP18089 450 aa17.59■□□□□ 0.41
USH1C-207ENST00000527720 CCZ1BP86790 482 aa17.59■□□□□ 0.41
USH1C-207ENST00000527720 CCZ1P86791 482 aaPredicted RBP17.59■□□□□ 0.41
USH1C-207ENST00000527720 C15orf52Q6ZUT6 534 aaKnown RBP17.59■□□□□ 0.41
USH1C-207ENST00000527720 VPS54Q9P1Q0 977 aa17.59■□□□□ 0.41
USH1C-207ENST00000527720 PCDHA5Q9Y5H7 936 aa17.59■□□□□ 0.41
USH1C-207ENST00000527720 V9GY48 417 aaPredicted RBP17.59■□□□□ 0.41
USH1C-207ENST00000527720 CNTNAP5Q8WYK1 1306 aa17.59■□□□□ 0.41
USH1C-207ENST00000527720 CDK5RAP2Q96SN8 1893 aa17.59■□□□□ 0.41
USH1C-207ENST00000527720 CBFA2T2O43439 604 aa17.59■□□□□ 0.41
USH1C-207ENST00000527720 GSTO1P78417 241 aa17.59■□□□□ 0.41
USH1C-207ENST00000527720 POSTNQ15063 836 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms