RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 NAV1Q8NEY1 1877 aa31.75■■■□□ 2.67
TSPAN4-217ENST00000527644 DDX60LQ5H9U9 1706 aaKnown RBP31.75■■■□□ 2.67
TSPAN4-217ENST00000527644 RNF113AO15541 343 aaKnown RBP31.74■■■□□ 2.67
TSPAN4-217ENST00000527644 PRKAB2O43741 272 aa31.74■■■□□ 2.67
TSPAN4-217ENST00000527644 ARHGEF6Q15052 776 aa31.74■■■□□ 2.67
TSPAN4-217ENST00000527644 C17orf99Q6UX52 265 aa31.74■■■□□ 2.67
TSPAN4-217ENST00000527644 OTOP1Q7RTM1 612 aa31.74■■■□□ 2.67
TSPAN4-217ENST00000527644 PROCA1Q8NCQ7 364 aaPredicted RBP31.74■■■□□ 2.67
TSPAN4-217ENST00000527644 ZBTB21Q9ULJ3 1066 aa31.74■■■□□ 2.67
TSPAN4-217ENST00000527644 SMC5Q8IY18 1101 aa31.73■■■□□ 2.67
TSPAN4-217ENST00000527644 EFCC1Q9HA90 598 aa31.73■■■□□ 2.67
TSPAN4-217ENST00000527644 AGTPBP1Q9UPW5 1226 aa31.73■■■□□ 2.67
TSPAN4-217ENST00000527644 GABPAQ06546 454 aa31.72■■■□□ 2.67
TSPAN4-217ENST00000527644 CERKLQ49MI3 558 aaPredicted RBP31.72■■■□□ 2.67
TSPAN4-217ENST00000527644 SH3D19Q5HYK7 790 aa31.72■■■□□ 2.67
TSPAN4-217ENST00000527644 APPBP2Q92624 585 aa31.72■■■□□ 2.67
TSPAN4-217ENST00000527644 DDRGK1Q96HY6 314 aa31.72■■■□□ 2.67
TSPAN4-217ENST00000527644 STAP2Q9UGK3 403 aa31.72■■■□□ 2.67
TSPAN4-217ENST00000527644 TAOK2Q9UL54 1235 aa31.72■■■□□ 2.67
TSPAN4-217ENST00000527644 HPS5Q9UPZ3 1129 aa31.72■■■□□ 2.67
TSPAN4-217ENST00000527644 SLC4A4Q9Y6R1 1079 aa31.72■■■□□ 2.67
TSPAN4-217ENST00000527644 ADGRA2Q96PE1 1338 aa31.72■■■□□ 2.67
TSPAN4-217ENST00000527644 HMGCS2P54868 508 aa31.71■■■□□ 2.67
TSPAN4-217ENST00000527644 SHROOM1Q2M3G4 852 aaPredicted RBP31.71■■■□□ 2.67
TSPAN4-217ENST00000527644 CPA4Q9UI42 421 aa31.71■■■□□ 2.67
TSPAN4-217ENST00000527644 GH2P01242 217 aa31.7■■■□□ 2.67
TSPAN4-217ENST00000527644 IGHDP01880 384 aa31.7■■■□□ 2.67
TSPAN4-217ENST00000527644 CYP2C8P10632 490 aa31.7■■■□□ 2.67
TSPAN4-217ENST00000527644 SHMT1P34896 483 aa31.7■■■□□ 2.67
TSPAN4-217ENST00000527644 BACE1P56817 501 aa31.7■■■□□ 2.67
TSPAN4-217ENST00000527644 KIF22Q14807 665 aa31.7■■■□□ 2.67
TSPAN4-217ENST00000527644 STRBPQ96SI9 672 aaKnown RBP31.7■■■□□ 2.67
TSPAN4-217ENST00000527644 LACTBP83111 547 aaPredicted RBP31.69■■■□□ 2.66
TSPAN4-217ENST00000527644 AMOTL1Q8IY63 956 aa31.69■■■□□ 2.66
TSPAN4-217ENST00000527644 OSBP2Q969R2 916 aa31.69■■■□□ 2.66
TSPAN4-217ENST00000527644 C19orf81C9J6K1 198 aa31.68■■■□□ 2.66
TSPAN4-217ENST00000527644 CYP2D6P10635 497 aa31.68■■■□□ 2.66
TSPAN4-217ENST00000527644 PDE1AP54750 535 aa31.68■■■□□ 2.66
TSPAN4-217ENST00000527644 CAP1Q01518 475 aa31.68■■■□□ 2.66
TSPAN4-217ENST00000527644 ABCB5Q2M3G0 1257 aa31.68■■■□□ 2.66
TSPAN4-217ENST00000527644 TREML2Q5T2D2 321 aa31.68■■■□□ 2.66
TSPAN4-217ENST00000527644 CABP5Q9NP86 173 aa31.68■■■□□ 2.66
TSPAN4-217ENST00000527644 USP17L10C9JJH3 530 aa31.67■■■□□ 2.66
TSPAN4-217ENST00000527644 PABPC4Q13310 644 aaKnown RBP eCLIP31.67■■■□□ 2.66
TSPAN4-217ENST00000527644 MTMR2Q13614 643 aa31.67■■■□□ 2.66
TSPAN4-217ENST00000527644 FSD1Q9BTV5 496 aa31.67■■■□□ 2.66
TSPAN4-217ENST00000527644 LNPKQ9C0E8 428 aa31.67■■■□□ 2.66
TSPAN4-217ENST00000527644 SWAP70Q9UH65 585 aa31.67■■■□□ 2.66
TSPAN4-217ENST00000527644 PNMA3Q9UL41 463 aa31.67■■■□□ 2.66
TSPAN4-217ENST00000527644 PTPN22Q9Y2R2 807 aa31.67■■■□□ 2.66
TSPAN4-217ENST00000527644 EVX2Q03828 476 aa31.66■■■□□ 2.66
TSPAN4-217ENST00000527644 C12orf60Q5U649 245 aa31.66■■■□□ 2.66
TSPAN4-217ENST00000527644 B4GALNT3Q6L9W6 998 aa31.66■■■□□ 2.66
TSPAN4-217ENST00000527644 TMOD4Q9NZQ9 345 aa31.66■■■□□ 2.66
TSPAN4-217ENST00000527644 USP17L12C9JPN9 530 aa31.65■■■□□ 2.66
TSPAN4-217ENST00000527644 USP17L21D6R901 530 aa31.65■■■□□ 2.66
TSPAN4-217ENST00000527644 BCRP11274 1271 aa31.65■■■□□ 2.66
TSPAN4-217ENST00000527644 LOC285556D6RIA3 1793 aa31.65■■■□□ 2.66
TSPAN4-217ENST00000527644 GNRH1P01148 92 aa31.64■■■□□ 2.66
TSPAN4-217ENST00000527644 RAB3GAP1Q15042 981 aa31.64■■■□□ 2.66
TSPAN4-217ENST00000527644 GIMAP6Q6P9H5 292 aa31.64■■■□□ 2.66
TSPAN4-217ENST00000527644 SMCR8Q8TEV9 937 aaPredicted RBP31.64■■■□□ 2.66
TSPAN4-217ENST00000527644 BAZ2AQ9UIF9 1905 aaKnown RBP31.63■■■□□ 2.65
TSPAN4-217ENST00000527644 GPAA1O43292 621 aa31.63■■■□□ 2.65
TSPAN4-217ENST00000527644 GNAT2P19087 354 aa31.63■■■□□ 2.65
TSPAN4-217ENST00000527644 NUCB1Q02818 461 aa31.63■■■□□ 2.65
TSPAN4-217ENST00000527644 CTR9Q6PD62 1173 aa31.63■■■□□ 2.65
TSPAN4-217ENST00000527644 CHD1LQ86WJ1 897 aa31.63■■■□□ 2.65
TSPAN4-217ENST00000527644 EVI5LQ96CN4 794 aa31.63■■■□□ 2.65
TSPAN4-217ENST00000527644 ARHGAP39Q9C0H5 1083 aa31.63■■■□□ 2.65
TSPAN4-217ENST00000527644 GSG1L2A8MUP6 293 aa31.62■■■□□ 2.65
TSPAN4-217ENST00000527644 OSBPP22059 807 aa31.62■■■□□ 2.65
TSPAN4-217ENST00000527644 DYNLL2Q96FJ2 89 aa31.62■■■□□ 2.65
TSPAN4-217ENST00000527644 ARPP21Q9UBL0 812 aaPredicted RBP31.62■■■□□ 2.65
TSPAN4-217ENST00000527644 CYP2D7A0A087X1C5 515 aa31.61■■■□□ 2.65
TSPAN4-217ENST00000527644 M0R2C6 588 aa31.61■■■□□ 2.65
TSPAN4-217ENST00000527644 USP17L2Q6R6M4 530 aa31.61■■■□□ 2.65
TSPAN4-217ENST00000527644 SLC44A5Q8NCS7 719 aa31.61■■■□□ 2.65
TSPAN4-217ENST00000527644 PSMC4P43686 418 aa31.6■■■□□ 2.65
TSPAN4-217ENST00000527644 SBK1Q52WX2 424 aa31.6■■■□□ 2.65
TSPAN4-217ENST00000527644 ZMYM1Q5SVZ6 1142 aa31.6■■■□□ 2.65
TSPAN4-217ENST00000527644 MPHOSPH10O00566 681 aaKnown RBP31.59■■■□□ 2.65
TSPAN4-217ENST00000527644 HOXA7P31268 230 aaPredicted RBP31.59■■■□□ 2.65
TSPAN4-217ENST00000527644 GUCY1A2P33402 732 aa31.59■■■□□ 2.65
TSPAN4-217ENST00000527644 IRX6P78412 446 aaPredicted RBP31.59■■■□□ 2.65
TSPAN4-217ENST00000527644 C16orf86Q6ZW13 317 aa31.59■■■□□ 2.65
TSPAN4-217ENST00000527644 FEZ1Q99689 392 aa31.59■■■□□ 2.65
TSPAN4-217ENST00000527644 ASCC2Q9H1I8 757 aaPredicted RBP31.59■■■□□ 2.65
TSPAN4-217ENST00000527644 EMILIN3Q9NT22 766 aa31.59■■■□□ 2.65
TSPAN4-217ENST00000527644 CDK8P49336 464 aa31.58■■■□□ 2.65
TSPAN4-217ENST00000527644 USP14P54578 494 aa31.58■■■□□ 2.65
TSPAN4-217ENST00000527644 PRMT2P55345 433 aa31.58■■■□□ 2.65
TSPAN4-217ENST00000527644 SEPT2Q15019 361 aa31.58■■■□□ 2.65
TSPAN4-217ENST00000527644 PATL2C9JE40 543 aaKnown RBP31.57■■■□□ 2.64
TSPAN4-217ENST00000527644 FMNL1O95466 1100 aaPredicted RBP31.57■■■□□ 2.64
TSPAN4-217ENST00000527644 HOXD10P28358 340 aa31.57■■■□□ 2.64
TSPAN4-217ENST00000527644 CTGFP29279 349 aa31.57■■■□□ 2.64
TSPAN4-217ENST00000527644 GCLCP48506 637 aaPredicted RBP31.57■■■□□ 2.64
TSPAN4-217ENST00000527644 TMEM179Q6ZVK1 233 aa31.57■■■□□ 2.64
TSPAN4-217ENST00000527644 TICAM2Q86XR7 235 aa31.57■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms