RNA–Protein interactions for RNA: ENST00000526506.5

HIF3A-210, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-210ENST00000526506 CRHR2Q13324 411 aa18.06■□□□□ 0.48
HIF3A-210ENST00000526506 NOM1Q5C9Z4 860 aaKnown RBP18.06■□□□□ 0.48
HIF3A-210ENST00000526506 C12orf60Q5U649 245 aa18.06■□□□□ 0.48
HIF3A-210ENST00000526506 PRRT2Q7Z6L0 340 aaPredicted RBP18.06■□□□□ 0.48
HIF3A-210ENST00000526506 RILPL2Q969X0 211 aa18.06■□□□□ 0.48
HIF3A-210ENST00000526506 ARPP21Q9UBL0 812 aaPredicted RBP18.06■□□□□ 0.48
HIF3A-210ENST00000526506 ZBTB21Q9ULJ3 1066 aa18.06■□□□□ 0.48
HIF3A-210ENST00000526506 CYP2D7A0A087X1C5 515 aa18.05■□□□□ 0.48
HIF3A-210ENST00000526506 BTBD19C9JJ37 291 aa18.05■□□□□ 0.48
HIF3A-210ENST00000526506 GPR25O00155 361 aa18.05■□□□□ 0.48
HIF3A-210ENST00000526506 SHMT1P34896 483 aa18.05■□□□□ 0.48
HIF3A-210ENST00000526506 JAG1P78504 1218 aa18.05■□□□□ 0.48
HIF3A-210ENST00000526506 TAF1CQ15572 869 aaPredicted RBP18.05■□□□□ 0.48
HIF3A-210ENST00000526506 CERKLQ49MI3 558 aaPredicted RBP18.05■□□□□ 0.48
HIF3A-210ENST00000526506 FASTKD5Q7L8L6 764 aaKnown RBP18.05■□□□□ 0.48
HIF3A-210ENST00000526506 ANKRD23Q86SG2 305 aa18.05■□□□□ 0.48
HIF3A-210ENST00000526506 ZNF280CQ8ND82 737 aa18.05■□□□□ 0.48
HIF3A-210ENST00000526506 R3HDMLQ9H3Y0 253 aa18.05■□□□□ 0.48
HIF3A-210ENST00000526506 AS3MTQ9HBK9 375 aa18.05■□□□□ 0.48
HIF3A-210ENST00000526506 SWAP70Q9UH65 585 aa18.05■□□□□ 0.48
HIF3A-210ENST00000526506 ATAD5Q96QE3 1844 aa18.05■□□□□ 0.48
HIF3A-210ENST00000526506 GH2P01242 217 aa18.04■□□□□ 0.48
HIF3A-210ENST00000526506 APPP05067 770 aa18.04■□□□□ 0.48
HIF3A-210ENST00000526506 NEFLP07196 543 aa18.04■□□□□ 0.48
HIF3A-210ENST00000526506 CENPBP07199 599 aaPredicted RBP18.04■□□□□ 0.48
HIF3A-210ENST00000526506 SPP2Q13103 211 aa18.04■□□□□ 0.48
HIF3A-210ENST00000526506 MOGSQ13724 837 aa18.04■□□□□ 0.48
HIF3A-210ENST00000526506 ABCB5Q2M3G0 1257 aa18.04■□□□□ 0.48
HIF3A-210ENST00000526506 SHROOM1Q2M3G4 852 aaPredicted RBP18.04■□□□□ 0.48
HIF3A-210ENST00000526506 CTR9Q6PD62 1173 aa18.04■□□□□ 0.48
HIF3A-210ENST00000526506 DYNLL2Q96FJ2 89 aa18.04■□□□□ 0.48
HIF3A-210ENST00000526506 ZFYVE28Q9HCC9 887 aa18.04■□□□□ 0.48
HIF3A-210ENST00000526506 PHIPQ8WWQ0 1821 aa18.03■□□□□ 0.48
HIF3A-210ENST00000526506 PATL2C9JE40 543 aaKnown RBP18.03■□□□□ 0.48
HIF3A-210ENST00000526506 TDO2P48775 406 aa18.03■□□□□ 0.48
HIF3A-210ENST00000526506 SBK1Q52WX2 424 aa18.03■□□□□ 0.48
HIF3A-210ENST00000526506 SLC44A5Q8NCS7 719 aa18.03■□□□□ 0.48
HIF3A-210ENST00000526506 ZNF296Q8WUU4 475 aaPredicted RBP18.03■□□□□ 0.48
HIF3A-210ENST00000526506 WDR18Q9BV38 432 aa18.03■□□□□ 0.48
HIF3A-210ENST00000526506 NACAP1Q9BZK3 213 aa18.03■□□□□ 0.48
HIF3A-210ENST00000526506 EPB41L4AQ9HCS5 686 aaPredicted RBP18.03■□□□□ 0.48
HIF3A-210ENST00000526506 CABP5Q9NP86 173 aa18.03■□□□□ 0.48
HIF3A-210ENST00000526506 HELLSQ9NRZ9 838 aa18.03■□□□□ 0.48
HIF3A-210ENST00000526506 BAZ2AQ9UIF9 1905 aaKnown RBP18.02■□□□□ 0.48
HIF3A-210ENST00000526506 PDHXO00330 501 aa18.02■□□□□ 0.48
HIF3A-210ENST00000526506 GPAT2Q6NUI2 795 aa18.02■□□□□ 0.48
HIF3A-210ENST00000526506 GADL1Q6ZQY3 521 aa18.02■□□□□ 0.48
HIF3A-210ENST00000526506 CCDC129Q6ZRS4 1044 aa18.02■□□□□ 0.48
HIF3A-210ENST00000526506 CENPQQ7L2Z9 268 aaPredicted RBP18.02■□□□□ 0.48
HIF3A-210ENST00000526506 FAM227BQ96M60 508 aa18.02■□□□□ 0.48
HIF3A-210ENST00000526506 A0A0D9SFI3 127 aa18.01■□□□□ 0.47
HIF3A-210ENST00000526506 SMIM22K7EJ46 135 aa18.01■□□□□ 0.47
HIF3A-210ENST00000526506 FKTNO75072 461 aa18.01■□□□□ 0.47
HIF3A-210ENST00000526506 CDK8P49336 464 aa18.01■□□□□ 0.47
HIF3A-210ENST00000526506 NMIQ13287 307 aaPredicted RBP18.01■□□□□ 0.47
HIF3A-210ENST00000526506 RAB3GAP1Q15042 981 aa18.01■□□□□ 0.47
HIF3A-210ENST00000526506 TTC22Q5TAA0 569 aa18.01■□□□□ 0.47
HIF3A-210ENST00000526506 C16orf86Q6ZW13 317 aa18.01■□□□□ 0.47
HIF3A-210ENST00000526506 IFNL3Q8IZI9 196 aa18.01■□□□□ 0.47
HIF3A-210ENST00000526506 PROCA1Q8NCQ7 364 aaPredicted RBP18.01■□□□□ 0.47
HIF3A-210ENST00000526506 CASP8AP2Q9UKL3 1982 aa18■□□□□ 0.47
HIF3A-210ENST00000526506 MINDY4BA8MYZ0 360 aa18■□□□□ 0.47
HIF3A-210ENST00000526506 MPHOSPH10O00566 681 aaKnown RBP18■□□□□ 0.47
HIF3A-210ENST00000526506 SDSP20132 328 aa18■□□□□ 0.47
HIF3A-210ENST00000526506 HMGCS2P54868 508 aa18■□□□□ 0.47
HIF3A-210ENST00000526506 BACE1P56817 501 aa18■□□□□ 0.47
HIF3A-210ENST00000526506 MTMR2Q13614 643 aa18■□□□□ 0.47
HIF3A-210ENST00000526506 MCMDC2Q4G0Z9 681 aa18■□□□□ 0.47
HIF3A-210ENST00000526506 SH3D19Q5HYK7 790 aa18■□□□□ 0.47
HIF3A-210ENST00000526506 NAPBQ9H115 298 aa18■□□□□ 0.47
HIF3A-210ENST00000526506 SLC45A1Q9Y2W3 748 aa18■□□□□ 0.47
HIF3A-210ENST00000526506 ROBO3Q96MS0 1386 aa18■□□□□ 0.47
HIF3A-210ENST00000526506 C19orf81C9J6K1 198 aa17.99■□□□□ 0.47
HIF3A-210ENST00000526506 USP17L10C9JJH3 530 aa17.99■□□□□ 0.47
HIF3A-210ENST00000526506 HIP1O00291 1037 aa17.99■□□□□ 0.47
HIF3A-210ENST00000526506 TLR2O60603 784 aa17.99■□□□□ 0.47
HIF3A-210ENST00000526506 CCDC17Q96LX7 622 aa17.99■□□□□ 0.47
HIF3A-210ENST00000526506 PARK7Q99497 189 aaKnown RBP17.99■□□□□ 0.47
HIF3A-210ENST00000526506 DIAPH3Q9NSV4 1193 aa17.99■□□□□ 0.47
HIF3A-210ENST00000526506 TMOD4Q9NZQ9 345 aa17.99■□□□□ 0.47
HIF3A-210ENST00000526506 AGTPBP1Q9UPW5 1226 aa17.99■□□□□ 0.47
HIF3A-210ENST00000526506 PTPRFP10586 1907 aa17.99■□□□□ 0.47
HIF3A-210ENST00000526506 GSPT1P15170 499 aaKnown RBP17.98■□□□□ 0.47
HIF3A-210ENST00000526506 TMEM179Q6ZVK1 233 aa17.98■□□□□ 0.47
HIF3A-210ENST00000526506 FEZ1Q99689 392 aa17.98■□□□□ 0.47
HIF3A-210ENST00000526506 FOXP2O15409 715 aa17.97■□□□□ 0.47
HIF3A-210ENST00000526506 CYP2C8P10632 490 aa17.97■□□□□ 0.47
HIF3A-210ENST00000526506 AKR1B1P15121 316 aa17.97■□□□□ 0.47
HIF3A-210ENST00000526506 GUCY1A2P33402 732 aa17.97■□□□□ 0.47
HIF3A-210ENST00000526506 MFAP1P55081 439 aaKnown RBP17.97■□□□□ 0.47
HIF3A-210ENST00000526506 SP3Q02447 781 aa17.97■□□□□ 0.47
HIF3A-210ENST00000526506 SEPT2Q15019 361 aa17.97■□□□□ 0.47
HIF3A-210ENST00000526506 TREML2Q5T2D2 321 aa17.97■□□□□ 0.47
HIF3A-210ENST00000526506 VPS53Q5VIR6 699 aa17.97■□□□□ 0.47
HIF3A-210ENST00000526506 CTU1Q7Z7A3 348 aaKnown RBP17.97■□□□□ 0.47
HIF3A-210ENST00000526506 ZNF589Q86UQ0 364 aaPredicted RBP17.97■□□□□ 0.47
HIF3A-210ENST00000526506 CCDC136Q96JN2 1154 aa17.97■□□□□ 0.47
HIF3A-210ENST00000526506 ZNF287Q9HBT7 754 aa17.97■□□□□ 0.47
HIF3A-210ENST00000526506 CCDC171Q6TFL3 1326 aa17.97■□□□□ 0.47
HIF3A-210ENST00000526506 LOC285556D6RIA3 1793 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms