RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 KCNMB1Q16558 191 aa7.99□□□□□ -1.13
CSDE1-210ENST00000525878 MFSD4AQ8N468 514 aa7.99□□□□□ -1.13
CSDE1-210ENST00000525878 MIPEPQ99797 713 aa7.99□□□□□ -1.13
CSDE1-210ENST00000525878 ATP13A1Q9HD20 1204 aa7.99□□□□□ -1.13
CSDE1-210ENST00000525878 C19orf73Q9NVV2 129 aa7.99□□□□□ -1.13
CSDE1-210ENST00000525878 FAM53CQ9NYF3 392 aa7.99□□□□□ -1.13
CSDE1-210ENST00000525878 CST3P01034 146 aaPredicted RBP7.98□□□□□ -1.13
CSDE1-210ENST00000525878 EIF4BP23588 611 aaKnown RBP7.98□□□□□ -1.13
CSDE1-210ENST00000525878 AFMP43652 599 aa7.98□□□□□ -1.13
CSDE1-210ENST00000525878 ETF1P62495 437 aaKnown RBP7.98□□□□□ -1.13
CSDE1-210ENST00000525878 FYB2Q5VWT5 728 aa7.98□□□□□ -1.13
CSDE1-210ENST00000525878 LETMD1Q6P1Q0 360 aa7.98□□□□□ -1.13
CSDE1-210ENST00000525878 FAM84AQ96KN4 292 aa7.98□□□□□ -1.13
CSDE1-210ENST00000525878 CARS2Q9HA77 564 aaKnown RBP7.98□□□□□ -1.13
CSDE1-210ENST00000525878 TPX2Q9ULW0 747 aaKnown RBP7.98□□□□□ -1.13
CSDE1-210ENST00000525878 LRRC10BA6NIK2 292 aa7.97□□□□□ -1.13
CSDE1-210ENST00000525878 FAM155AB1AL88 458 aaPredicted RBP7.97□□□□□ -1.13
CSDE1-210ENST00000525878 PRPF40AO75400 957 aaKnown RBP7.97□□□□□ -1.13
CSDE1-210ENST00000525878 FGD1P98174 961 aa7.97□□□□□ -1.13
CSDE1-210ENST00000525878 PRAMEF13Q5VWM6 474 aa7.97□□□□□ -1.13
CSDE1-210ENST00000525878 AGMOQ6ZNB7 445 aa7.97□□□□□ -1.13
CSDE1-210ENST00000525878 THAP5Q7Z6K1 395 aa7.97□□□□□ -1.13
CSDE1-210ENST00000525878 CILP2Q8IUL8 1156 aa7.97□□□□□ -1.13
CSDE1-210ENST00000525878 NPAS4Q8IUM7 802 aa7.97□□□□□ -1.13
CSDE1-210ENST00000525878 KSR1Q8IVT5 923 aa7.97□□□□□ -1.13
CSDE1-210ENST00000525878 PCDHB5Q9Y5E4 795 aa7.97□□□□□ -1.13
CSDE1-210ENST00000525878 AK5Q9Y6K8 562 aa7.97□□□□□ -1.13
CSDE1-210ENST00000525878 GRK4P32298 578 aa7.96□□□□□ -1.14
CSDE1-210ENST00000525878 GDNFP39905 211 aa7.96□□□□□ -1.14
CSDE1-210ENST00000525878 CCDC85BQ15834 202 aaPredicted RBP7.96□□□□□ -1.14
CSDE1-210ENST00000525878 ZNF746Q6NUN9 644 aaPredicted RBP7.96□□□□□ -1.14
CSDE1-210ENST00000525878 COX4I2Q96KJ9 171 aa7.96□□□□□ -1.14
CSDE1-210ENST00000525878 GLI1P08151 1106 aa7.95□□□□□ -1.14
CSDE1-210ENST00000525878 SEPT6Q14141 434 aa7.95□□□□□ -1.14
CSDE1-210ENST00000525878 PKN1Q16512 942 aa7.95□□□□□ -1.14
CSDE1-210ENST00000525878 CDKAL1Q5VV42 579 aa7.95□□□□□ -1.14
CSDE1-210ENST00000525878 SPOCD1Q6ZMY3 1216 aa7.95□□□□□ -1.14
CSDE1-210ENST00000525878 MRPL41Q8IXM3 137 aaKnown RBP7.95□□□□□ -1.14
CSDE1-210ENST00000525878 LIN37Q96GY3 246 aaPredicted RBP7.95□□□□□ -1.14
CSDE1-210ENST00000525878 SLC38A3Q99624 504 aa7.95□□□□□ -1.14
CSDE1-210ENST00000525878 H3BS24 57 aa7.94□□□□□ -1.14
CSDE1-210ENST00000525878 RBAK-RBAKDNI3L0D1 243 aa7.94□□□□□ -1.14
CSDE1-210ENST00000525878 KIR3DL1P43629 444 aa7.94□□□□□ -1.14
CSDE1-210ENST00000525878 MLANAQ16655 118 aa7.94□□□□□ -1.14
CSDE1-210ENST00000525878 TRAIPQ9BWF2 469 aa7.94□□□□□ -1.14
CSDE1-210ENST00000525878 RNF19AQ9NV58 838 aa7.94□□□□□ -1.14
CSDE1-210ENST00000525878 TJP2Q9UDY2 1190 aa7.94□□□□□ -1.14
CSDE1-210ENST00000525878 LIG3P49916 1009 aa7.93□□□□□ -1.14
CSDE1-210ENST00000525878 TNK2Q07912 1038 aa7.93□□□□□ -1.14
CSDE1-210ENST00000525878 LCE4AQ5TA78 99 aa7.93□□□□□ -1.14
CSDE1-210ENST00000525878 KIRREL1Q96J84 757 aa7.93□□□□□ -1.14
CSDE1-210ENST00000525878 UBE2FQ969M7 185 aa7.92□□□□□ -1.14
CSDE1-210ENST00000525878 DUSP9Q99956 384 aaKnown RBP7.92□□□□□ -1.14
CSDE1-210ENST00000525878 CBX7O95931 251 aa7.91□□□□□ -1.14
CSDE1-210ENST00000525878 TFE3P19532 575 aaPredicted RBP7.91□□□□□ -1.14
CSDE1-210ENST00000525878 CYP7A1P22680 504 aa7.91□□□□□ -1.14
CSDE1-210ENST00000525878 FBLN7Q53RD9 439 aa7.91□□□□□ -1.14
CSDE1-210ENST00000525878 SLC6A19Q695T7 634 aa7.91□□□□□ -1.14
CSDE1-210ENST00000525878 CDH24Q86UP0 819 aa7.91□□□□□ -1.14
CSDE1-210ENST00000525878 PIWIL2Q8TC59 973 aaKnown RBP7.91□□□□□ -1.14
CSDE1-210ENST00000525878 XAGE3Q8WTP9 111 aa7.91□□□□□ -1.14
CSDE1-210ENST00000525878 ALPK1Q96QP1 1244 aa7.91□□□□□ -1.14
CSDE1-210ENST00000525878 ESR1P03372 595 aa7.9□□□□□ -1.14
CSDE1-210ENST00000525878 PGRP06401 933 aa7.9□□□□□ -1.14
CSDE1-210ENST00000525878 KRTAP19-4Q3LI73 84 aa7.9□□□□□ -1.14
CSDE1-210ENST00000525878 PRR23BQ6ZRT6 265 aa7.9□□□□□ -1.14
CSDE1-210ENST00000525878 MCATQ8IVS2 390 aaKnown RBP7.9□□□□□ -1.14
CSDE1-210ENST00000525878 DNAJB8Q8NHS0 232 aa7.9□□□□□ -1.14
CSDE1-210ENST00000525878 CCDC120Q96HB5 630 aa7.9□□□□□ -1.14
CSDE1-210ENST00000525878 TMEM87BQ96K49 555 aa7.9□□□□□ -1.14
CSDE1-210ENST00000525878 MIR1-1HGQ9H1L0 117 aa7.9□□□□□ -1.14
CSDE1-210ENST00000525878 PATL2C9JE40 543 aaKnown RBP7.89□□□□□ -1.15
CSDE1-210ENST00000525878 TSPAN15O95858 294 aa7.89□□□□□ -1.15
CSDE1-210ENST00000525878 RPL6Q02878 288 aaKnown RBP7.89□□□□□ -1.15
CSDE1-210ENST00000525878 TSNAXIP1Q2TAA8 658 aa7.89□□□□□ -1.15
CSDE1-210ENST00000525878 TMEM67Q5HYA8 995 aa7.89□□□□□ -1.15
CSDE1-210ENST00000525878 MEI1Q5TIA1 1274 aa7.89□□□□□ -1.15
CSDE1-210ENST00000525878 Q96M66 194 aa7.89□□□□□ -1.15
CSDE1-210ENST00000525878 DPH2Q9BQC3 489 aaPredicted RBP7.89□□□□□ -1.15
CSDE1-210ENST00000525878 ZSWIM5Q9P217 1185 aa7.89□□□□□ -1.15
CSDE1-210ENST00000525878 ADAM30Q9UKF2 790 aa7.89□□□□□ -1.15
CSDE1-210ENST00000525878 ANKRD33BA6NCL7 494 aa7.88□□□□□ -1.15
CSDE1-210ENST00000525878 KRT1P04264 644 aa7.88□□□□□ -1.15
CSDE1-210ENST00000525878 LMNB1P20700 586 aa7.88□□□□□ -1.15
CSDE1-210ENST00000525878 EAPPQ56P03 285 aaPredicted RBP7.88□□□□□ -1.15
CSDE1-210ENST00000525878 TMPRSS7Q7RTY8 843 aa7.88□□□□□ -1.15
CSDE1-210ENST00000525878 ACSF2Q96CM8 615 aaPredicted RBP7.88□□□□□ -1.15
CSDE1-210ENST00000525878 NOC4LQ9BVI4 516 aaKnown RBP7.88□□□□□ -1.15
CSDE1-210ENST00000525878 RLBP1P12271 317 aa7.87□□□□□ -1.15
CSDE1-210ENST00000525878 ETV3P41162 512 aa7.87□□□□□ -1.15
CSDE1-210ENST00000525878 ST13P50502 369 aaKnown RBP7.87□□□□□ -1.15
CSDE1-210ENST00000525878 PDE4BQ07343 736 aa7.87□□□□□ -1.15
CSDE1-210ENST00000525878 MAP3K11Q16584 847 aa7.87□□□□□ -1.15
CSDE1-210ENST00000525878 C1QL4Q86Z23 238 aa7.87□□□□□ -1.15
CSDE1-210ENST00000525878 PPP1R13LQ8WUF5 828 aa7.87□□□□□ -1.15
CSDE1-210ENST00000525878 PPP1R16BQ96T49 567 aa7.87□□□□□ -1.15
CSDE1-210ENST00000525878 DUSP15Q9H1R2 295 aaPredicted RBP7.87□□□□□ -1.15
CSDE1-210ENST00000525878 SRFP11831 508 aa7.86□□□□□ -1.15
CSDE1-210ENST00000525878 RAP1GAPP47736 663 aa7.86□□□□□ -1.15
CSDE1-210ENST00000525878 DAB2P98082 770 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms