RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 NBPF3Q9H094 633 aa15.11■□□□□ 0.01
LRRK1-202ENST00000525284 CALUO43852 315 aaPredicted RBP15.11■□□□□ 0.01
LRRK1-202ENST00000525284 SDSP20132 328 aa15.11■□□□□ 0.01
LRRK1-202ENST00000525284 BLVRAP53004 296 aa15.11■□□□□ 0.01
LRRK1-202ENST00000525284 MAEAQ7L5Y9 396 aa15.11■□□□□ 0.01
LRRK1-202ENST00000525284 DRC3Q9H069 523 aa15.11■□□□□ 0.01
LRRK1-202ENST00000525284 DBF4Q9UBU7 674 aaPredicted RBP15.11■□□□□ 0.01
LRRK1-202ENST00000525284 MCMDC2Q4G0Z9 681 aa15.11■□□□□ 0.01
LRRK1-202ENST00000525284 UHMK1Q8TAS1 419 aaKnown RBP15.11■□□□□ 0.01
LRRK1-202ENST00000525284 SKA2Q8WVK7 121 aaPredicted RBP15.11■□□□□ 0.01
LRRK1-202ENST00000525284 POLA1P09884 1462 aaPredicted RBP15.11■□□□□ 0.01
LRRK1-202ENST00000525284 GINS2Q9Y248 185 aa15.11■□□□□ 0.01
LRRK1-202ENST00000525284 LETM2Q2VYF4 491 aa15.11■□□□□ 0.01
LRRK1-202ENST00000525284 TRIM27P14373 513 aa15.11■□□□□ 0.01
LRRK1-202ENST00000525284 MAGEA1P43355 309 aa15.11■□□□□ 0.01
LRRK1-202ENST00000525284 RNF217Q8TC41 542 aa15.11■□□□□ 0.01
LRRK1-202ENST00000525284 CAPS2Q9BXY5 557 aa15.11■□□□□ 0.01
LRRK1-202ENST00000525284 HAUS2Q9NVX0 235 aa15.11■□□□□ 0.01
LRRK1-202ENST00000525284 NOC2LQ9Y3T9 749 aaKnown RBP15.11■□□□□ 0.01
LRRK1-202ENST00000525284 NPR1P16066 1061 aa15.1■□□□□ 0.01
LRRK1-202ENST00000525284 SMTNP53814 917 aa15.1■□□□□ 0.01
LRRK1-202ENST00000525284 PARP2Q9UGN5 583 aa15.1■□□□□ 0.01
LRRK1-202ENST00000525284 IFNB1P01574 187 aa15.1■□□□□ 0.01
LRRK1-202ENST00000525284 SPATS2Q86XZ4 545 aaKnown RBP15.1■□□□□ 0.01
LRRK1-202ENST00000525284 RIOK1Q9BRS2 568 aaKnown RBP15.1■□□□□ 0.01
LRRK1-202ENST00000525284 RAB17Q9H0T7 212 aa15.1■□□□□ 0.01
LRRK1-202ENST00000525284 IFT122Q9HBG6 1241 aa15.1■□□□□ 0.01
LRRK1-202ENST00000525284 RTL9Q8NET4 1388 aa15.1■□□□□ 0.01
LRRK1-202ENST00000525284 MAN1A2O60476 641 aa15.1■□□□□ 0.01
LRRK1-202ENST00000525284 SERPINI2O75830 405 aa15.1■□□□□ 0.01
LRRK1-202ENST00000525284 PMS1P54277 932 aaKnown RBP15.1■□□□□ 0.01
LRRK1-202ENST00000525284 SYCE1Q8N0S2 351 aa15.1■□□□□ 0.01
LRRK1-202ENST00000525284 CSGALNACT2Q8N6G5 542 aa15.1■□□□□ 0.01
LRRK1-202ENST00000525284 BCAS4Q8TDM0 211 aa15.1■□□□□ 0.01
LRRK1-202ENST00000525284 RMDN2Q96LZ7 410 aa15.1■□□□□ 0.01
LRRK1-202ENST00000525284 FGD4Q96M96 766 aa15.1■□□□□ 0.01
LRRK1-202ENST00000525284 HOMER3Q9NSC5 361 aa15.1■□□□□ 0.01
LRRK1-202ENST00000525284 HFM1A2PYH4 1435 aa15.1■□□□□ 0.01
LRRK1-202ENST00000525284 PHBP35232 272 aa15.1■□□□□ 0.01
LRRK1-202ENST00000525284 STRN3Q13033 797 aa15.1■□□□□ 0.01
LRRK1-202ENST00000525284 ATAD2Q6PL18 1390 aa15.1■□□□□ 0.01
LRRK1-202ENST00000525284 CD19P15391 556 aa15.1■□□□□ 0.01
LRRK1-202ENST00000525284 PALMDQ9NP74 551 aa15.1■□□□□ 0.01
LRRK1-202ENST00000525284 KRT19P08727 400 aa15.09■□□□□ 0.01
LRRK1-202ENST00000525284 GNA11P29992 359 aa15.09■□□□□ 0.01
LRRK1-202ENST00000525284 TAB3Q8N5C8 712 aaPredicted RBP15.09■□□□□ 0.01
LRRK1-202ENST00000525284 MCUQ8NE86 351 aa15.09■□□□□ 0.01
LRRK1-202ENST00000525284 HAUS1Q96CS2 278 aa15.09■□□□□ 0.01
LRRK1-202ENST00000525284 SLF1Q9BQI6 1058 aa15.09■□□□□ 0.01
LRRK1-202ENST00000525284 PTPDC1A2A3K4 754 aa15.09■□□□□ 0.01
LRRK1-202ENST00000525284 NOP14P78316 857 aaKnown RBP15.09■□□□□ 0.01
LRRK1-202ENST00000525284 ITKQ08881 620 aa15.09■□□□□ 0.01
LRRK1-202ENST00000525284 SLC12A1Q13621 1099 aa15.09■□□□□ 0.01
LRRK1-202ENST00000525284 TMEM259Q4ZIN3 620 aa15.09■□□□□ 0.01
LRRK1-202ENST00000525284 TEX11Q8IYF3 940 aa15.09■□□□□ 0.01
LRRK1-202ENST00000525284 POLR3CQ9BUI4 534 aaPredicted RBP15.09■□□□□ 0.01
LRRK1-202ENST00000525284 GTPBP10A4D1E9 387 aaKnown RBP15.09■□□□□ 0.01
LRRK1-202ENST00000525284 RBM26Q5T8P6 1007 aaKnown RBP15.09■□□□□ 0.01
LRRK1-202ENST00000525284 FBXO41Q8TF61 875 aa15.09■□□□□ 0.01
LRRK1-202ENST00000525284 CCDC124Q96CT7 223 aaKnown RBP15.09■□□□□ 0.01
LRRK1-202ENST00000525284 SMYD2Q9NRG4 433 aa15.09■□□□□ 0.01
LRRK1-202ENST00000525284 CDK13Q14004 1512 aaKnown RBP15.09■□□□□ 0.01
LRRK1-202ENST00000525284 SYNRGQ9UMZ2 1314 aa15.09■□□□□ 0.01
LRRK1-202ENST00000525284 FANCCQ00597 558 aa15.09■□□□□ 0.01
LRRK1-202ENST00000525284 ASPHQ12797 758 aa15.09■□□□□ 0.01
LRRK1-202ENST00000525284 SLC9C2Q5TAH2 1124 aa15.09■□□□□ 0.01
LRRK1-202ENST00000525284 CNNM4Q6P4Q7 775 aa15.09■□□□□ 0.01
LRRK1-202ENST00000525284 SCYL3Q8IZE3 742 aa15.09■□□□□ 0.01
LRRK1-202ENST00000525284 GPC4O75487 556 aa15.08■□□□□ 0.01
LRRK1-202ENST00000525284 FAM186BQ8IYM0 893 aa15.08■□□□□ 0.01
LRRK1-202ENST00000525284 MYRIPQ8NFW9 859 aa15.08■□□□□ 0.01
LRRK1-202ENST00000525284 SLC4A7Q9Y6M7 1214 aa15.08■□□□□ 0.01
LRRK1-202ENST00000525284 MAGEB6P1A0A0J9YX57 407 aa15.08■□□□□ 0
LRRK1-202ENST00000525284 GOLGA8KD6RF30 607 aa15.08■□□□□ 0
LRRK1-202ENST00000525284 ADCY8P40145 1251 aa15.08■□□□□ 0
LRRK1-202ENST00000525284 TRMT10CQ7L0Y3 403 aaKnown RBP15.08■□□□□ 0
LRRK1-202ENST00000525284 EFCAB5A4FU69 1503 aa15.08■□□□□ 0
LRRK1-202ENST00000525284 ESYT1Q9BSJ8 1104 aa15.08■□□□□ 0
LRRK1-202ENST00000525284 POLKQ9UBT6 870 aa15.08■□□□□ 0
LRRK1-202ENST00000525284 PTPRCP08575 1304 aa15.08■□□□□ 0
LRRK1-202ENST00000525284 GRAMD4Q6IC98 578 aa15.08■□□□□ 0
LRRK1-202ENST00000525284 KLHL30Q0D2K2 578 aa15.08■□□□□ 0
LRRK1-202ENST00000525284 CEP70Q8NHQ1 597 aa15.08■□□□□ 0
LRRK1-202ENST00000525284 NKTRP30414 1462 aaKnown RBP15.07■□□□□ 0
LRRK1-202ENST00000525284 IGHDP01880 384 aa15.07■□□□□ 0
LRRK1-202ENST00000525284 HMGB2P26583 209 aaKnown RBP15.07■□□□□ 0
LRRK1-202ENST00000525284 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.07■□□□□ 0
LRRK1-202ENST00000525284 RHPN1Q8TCX5 695 aa15.07■□□□□ 0
LRRK1-202ENST00000525284 TBC1D7Q9P0N9 293 aa15.07■□□□□ 0
LRRK1-202ENST00000525284 NOD1Q9Y239 953 aa15.07■□□□□ 0
LRRK1-202ENST00000525284 SPDYE2BA6NHP3 402 aa15.07■□□□□ 0
LRRK1-202ENST00000525284 SPDYE6P0CI01 402 aa15.07■□□□□ 0
LRRK1-202ENST00000525284 BRAPQ7Z569 592 aa15.07■□□□□ 0
LRRK1-202ENST00000525284 LRRC8CQ8TDW0 803 aa15.07■□□□□ 0
LRRK1-202ENST00000525284 YY1AP1Q9H869 796 aa15.07■□□□□ 0
LRRK1-202ENST00000525284 TAB2Q9NYJ8 693 aa15.07■□□□□ 0
LRRK1-202ENST00000525284 AMOTL2Q9Y2J4 779 aa15.07■□□□□ 0
LRRK1-202ENST00000525284 GSTA4O15217 222 aa15.07■□□□□ 0
LRRK1-202ENST00000525284 NUCB1Q02818 461 aa15.07■□□□□ 0
LRRK1-202ENST00000525284 SNX1Q13596 522 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms