RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 GABRQQ9UN88 632 aa15.23■□□□□ 0.03
SMCO4-202ENST00000525141 ZNF532Q9HCE3 1301 aa15.22■□□□□ 0.03
SMCO4-202ENST00000525141 MAST2Q6P0Q8 1798 aa15.22■□□□□ 0.03
SMCO4-202ENST00000525141 GDF11O95390 407 aa15.22■□□□□ 0.03
SMCO4-202ENST00000525141 FMNL1O95466 1100 aaPredicted RBP15.22■□□□□ 0.03
SMCO4-202ENST00000525141 HMGCS2P54868 508 aa15.22■□□□□ 0.03
SMCO4-202ENST00000525141 TTF1Q15361 905 aaPredicted RBP15.22■□□□□ 0.03
SMCO4-202ENST00000525141 TMED8Q6PL24 325 aaPredicted RBP15.22■□□□□ 0.03
SMCO4-202ENST00000525141 POTEEQ6S8J3 1075 aa15.22■□□□□ 0.03
SMCO4-202ENST00000525141 PROCA1Q8NCQ7 364 aaPredicted RBP15.22■□□□□ 0.03
SMCO4-202ENST00000525141 ATAD5Q96QE3 1844 aa15.22■□□□□ 0.03
SMCO4-202ENST00000525141 MYH1P12882 1939 aa15.21■□□□□ 0.03
SMCO4-202ENST00000525141 MAGEB6P1A0A0J9YX57 407 aa15.21■□□□□ 0.03
SMCO4-202ENST00000525141 USP5P45974 858 aa15.21■□□□□ 0.03
SMCO4-202ENST00000525141 PRMT2P55345 433 aa15.21■□□□□ 0.03
SMCO4-202ENST00000525141 BACE1P56817 501 aa15.21■□□□□ 0.03
SMCO4-202ENST00000525141 DNAJC2Q99543 621 aaKnown RBP15.21■□□□□ 0.03
SMCO4-202ENST00000525141 HAUS7Q99871 368 aa15.21■□□□□ 0.03
SMCO4-202ENST00000525141 SMIM22K7EJ46 135 aa15.2■□□□□ 0.02
SMCO4-202ENST00000525141 PRKAB2O43741 272 aa15.2■□□□□ 0.02
SMCO4-202ENST00000525141 PEX10O60683 326 aa15.2■□□□□ 0.02
SMCO4-202ENST00000525141 ASNSP08243 561 aa15.2■□□□□ 0.02
SMCO4-202ENST00000525141 GUCY1A2P33402 732 aa15.2■□□□□ 0.02
SMCO4-202ENST00000525141 MTFR1Q15390 333 aa15.2■□□□□ 0.02
SMCO4-202ENST00000525141 SLC9C1Q4G0N8 1177 aa15.2■□□□□ 0.02
SMCO4-202ENST00000525141 CRACR2BQ8N4Y2 399 aaPredicted RBP15.2■□□□□ 0.02
SMCO4-202ENST00000525141 ANKRD13CQ8N6S4 541 aa15.2■□□□□ 0.02
SMCO4-202ENST00000525141 EXOC6Q8TAG9 804 aa15.2■□□□□ 0.02
SMCO4-202ENST00000525141 P2RX7Q99572 595 aaKnown RBP15.2■□□□□ 0.02
SMCO4-202ENST00000525141 TBC1D2Q9BYX2 928 aa15.2■□□□□ 0.02
SMCO4-202ENST00000525141 ASCC2Q9H1I8 757 aaPredicted RBP15.2■□□□□ 0.02
SMCO4-202ENST00000525141 EMILIN3Q9NT22 766 aa15.2■□□□□ 0.02
SMCO4-202ENST00000525141 PAG1Q9NWQ8 432 aa15.2■□□□□ 0.02
SMCO4-202ENST00000525141 MGAMO43451 1857 aa15.19■□□□□ 0.02
SMCO4-202ENST00000525141 MYCP01106 439 aaPredicted RBP15.19■□□□□ 0.02
SMCO4-202ENST00000525141 HOXA7P31268 230 aaPredicted RBP15.19■□□□□ 0.02
SMCO4-202ENST00000525141 SHMT1P34896 483 aa15.19■□□□□ 0.02
SMCO4-202ENST00000525141 ADD2P35612 726 aa15.19■□□□□ 0.02
SMCO4-202ENST00000525141 PRKCZQ05513 592 aa15.19■□□□□ 0.02
SMCO4-202ENST00000525141 GABPAQ06546 454 aa15.19■□□□□ 0.02
SMCO4-202ENST00000525141 NBPF11Q86T75 865 aa15.19■□□□□ 0.02
SMCO4-202ENST00000525141 LCORLQ8N3X6 602 aa15.19■□□□□ 0.02
SMCO4-202ENST00000525141 LRRCC1Q9C099 1032 aa15.19■□□□□ 0.02
SMCO4-202ENST00000525141 EHD4Q9H223 541 aa15.19■□□□□ 0.02
SMCO4-202ENST00000525141 FOXD4L1Q9NU39 408 aa15.19■□□□□ 0.02
SMCO4-202ENST00000525141 GINM1Q9NU53 330 aa15.19■□□□□ 0.02
SMCO4-202ENST00000525141 ZBTB21Q9ULJ3 1066 aa15.19■□□□□ 0.02
SMCO4-202ENST00000525141 C19orf81C9J6K1 198 aa15.18■□□□□ 0.02
SMCO4-202ENST00000525141 GH2P01242 217 aa15.18■□□□□ 0.02
SMCO4-202ENST00000525141 HLA-DOAP06340 250 aa15.18■□□□□ 0.02
SMCO4-202ENST00000525141 CYP2D6P10635 497 aa15.18■□□□□ 0.02
SMCO4-202ENST00000525141 HOXD10P28358 340 aa15.18■□□□□ 0.02
SMCO4-202ENST00000525141 FCGRTP55899 365 aa15.18■□□□□ 0.02
SMCO4-202ENST00000525141 HDAC1Q13547 482 aaPredicted RBP15.18■□□□□ 0.02
SMCO4-202ENST00000525141 MTMR2Q13614 643 aa15.18■□□□□ 0.02
SMCO4-202ENST00000525141 TTC6Q86TZ1 520 aa15.18■□□□□ 0.02
SMCO4-202ENST00000525141 CERS3Q8IU89 383 aa15.18■□□□□ 0.02
SMCO4-202ENST00000525141 SDR42E1Q8WUS8 393 aa15.18■□□□□ 0.02
SMCO4-202ENST00000525141 ARMT1Q9H993 441 aa15.18■□□□□ 0.02
SMCO4-202ENST00000525141 AS3MTQ9HBK9 375 aa15.18■□□□□ 0.02
SMCO4-202ENST00000525141 DCP1AQ9NPI6 582 aaPredicted RBP15.18■□□□□ 0.02
SMCO4-202ENST00000525141 SERPINB13Q9UIV8 391 aa15.18■□□□□ 0.02
SMCO4-202ENST00000525141 MYPNQ86TC9 1320 aa15.17■□□□□ 0.02
SMCO4-202ENST00000525141 MKI67P46013 3256 aaKnown RBP15.17■□□□□ 0.02
SMCO4-202ENST00000525141 USP17L10C9JJH3 530 aa15.17■□□□□ 0.02
SMCO4-202ENST00000525141 GRK4P32298 578 aa15.17■□□□□ 0.02
SMCO4-202ENST00000525141 Q3C1V9 767 aa15.17■□□□□ 0.02
SMCO4-202ENST00000525141 ACER1Q8TDN7 264 aa15.17■□□□□ 0.02
SMCO4-202ENST00000525141 TMEM106CQ9BVX2 250 aa15.17■□□□□ 0.02
SMCO4-202ENST00000525141 RBPJLQ9UBG7 517 aa15.17■□□□□ 0.02
SMCO4-202ENST00000525141 GJD2Q9UKL4 321 aa15.17■□□□□ 0.02
SMCO4-202ENST00000525141 LOC285556D6RIA3 1793 aa15.16■□□□□ 0.02
SMCO4-202ENST00000525141 FLT3LGP49771 235 aa15.16■□□□□ 0.02
SMCO4-202ENST00000525141 CERKLQ49MI3 558 aaPredicted RBP15.16■□□□□ 0.02
SMCO4-202ENST00000525141 SIAH1Q8IUQ4 282 aa15.16■□□□□ 0.02
SMCO4-202ENST00000525141 RAET1EQ8TD07 263 aa15.16■□□□□ 0.02
SMCO4-202ENST00000525141 SMCR8Q8TEV9 937 aaPredicted RBP15.16■□□□□ 0.02
SMCO4-202ENST00000525141 TXNRD2Q9NNW7 524 aa15.16■□□□□ 0.02
SMCO4-202ENST00000525141 MCM9Q9NXL9 1143 aa15.16■□□□□ 0.02
SMCO4-202ENST00000525141 BRCA2P51587 3418 aa15.16■□□□□ 0.02
SMCO4-202ENST00000525141 RBBP6Q7Z6E9 1792 aaKnown RBP15.16■□□□□ 0.02
SMCO4-202ENST00000525141 POLR3DP05423 398 aaPredicted RBP15.15■□□□□ 0.02
SMCO4-202ENST00000525141 GCLCP48506 637 aaPredicted RBP15.15■□□□□ 0.02
SMCO4-202ENST00000525141 UBE3CQ15386 1083 aa15.15■□□□□ 0.02
SMCO4-202ENST00000525141 FAM110CQ1W6H9 321 aa15.15■□□□□ 0.02
SMCO4-202ENST00000525141 GCC1Q96CN9 775 aa15.15■□□□□ 0.02
SMCO4-202ENST00000525141 DYNLL2Q96FJ2 89 aa15.15■□□□□ 0.02
SMCO4-202ENST00000525141 TRIM34Q9BYJ4 488 aa15.15■□□□□ 0.02
SMCO4-202ENST00000525141 CRNKL1Q9BZJ0 848 aaKnown RBP15.15■□□□□ 0.02
SMCO4-202ENST00000525141 PUS7LQ9H0K6 701 aaKnown RBP15.15■□□□□ 0.02
SMCO4-202ENST00000525141 RWDD1Q9H446 243 aaPredicted RBP15.15■□□□□ 0.02
SMCO4-202ENST00000525141 ECHDC1Q9NTX5 307 aa15.15■□□□□ 0.02
SMCO4-202ENST00000525141 MORF4L1Q9UBU8 362 aa15.15■□□□□ 0.02
SMCO4-202ENST00000525141 PNMA3Q9UL41 463 aa15.15■□□□□ 0.02
SMCO4-202ENST00000525141 CYP2D7A0A087X1C5 515 aa15.14■□□□□ 0.01
SMCO4-202ENST00000525141 A0A1W2PRG0 241 aa15.14■□□□□ 0.01
SMCO4-202ENST00000525141 MBD4O95243 580 aa15.14■□□□□ 0.01
SMCO4-202ENST00000525141 IRF5Q13568 498 aa15.14■□□□□ 0.01
SMCO4-202ENST00000525141 ABCB5Q2M3G0 1257 aa15.14■□□□□ 0.01
SMCO4-202ENST00000525141 TSHZ3Q63HK5 1081 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms