RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 TTC6Q86TZ1 520 aa13.51□□□□□ -0.25
TRAPPC4-204ENST00000524797 ZBTB21Q9ULJ3 1066 aa13.51□□□□□ -0.25
TRAPPC4-204ENST00000524797 PTCH2Q9Y6C5 1203 aa13.51□□□□□ -0.25
TRAPPC4-204ENST00000524797 GNRH1P01148 92 aa13.5□□□□□ -0.25
TRAPPC4-204ENST00000524797 HMGCS2P54868 508 aa13.5□□□□□ -0.25
TRAPPC4-204ENST00000524797 ARMC5Q96C12 935 aa13.5□□□□□ -0.25
TRAPPC4-204ENST00000524797 ARMT1Q9H993 441 aa13.5□□□□□ -0.25
TRAPPC4-204ENST00000524797 SERPINB13Q9UIV8 391 aa13.5□□□□□ -0.25
TRAPPC4-204ENST00000524797 ECM2O94769 699 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC4-204ENST00000524797 MBD4O95243 580 aa13.49□□□□□ -0.25
TRAPPC4-204ENST00000524797 POLR3DP05423 398 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC4-204ENST00000524797 PSMC4P43686 418 aa13.49□□□□□ -0.25
TRAPPC4-204ENST00000524797 PLCD1P51178 756 aa13.49□□□□□ -0.25
TRAPPC4-204ENST00000524797 UBE3CQ15386 1083 aa13.49□□□□□ -0.25
TRAPPC4-204ENST00000524797 SDR42E1Q8WUS8 393 aa13.49□□□□□ -0.25
TRAPPC4-204ENST00000524797 GPATCH3Q96I76 525 aa13.49□□□□□ -0.25
TRAPPC4-204ENST00000524797 TRIM47Q96LD4 638 aa13.49□□□□□ -0.25
TRAPPC4-204ENST00000524797 PNMA3Q9UL41 463 aa13.49□□□□□ -0.25
TRAPPC4-204ENST00000524797 GTF3C3Q9Y5Q9 886 aa13.49□□□□□ -0.25
TRAPPC4-204ENST00000524797 CHGBP05060 677 aa13.49□□□□□ -0.25
TRAPPC4-204ENST00000524797 PRMT2P55345 433 aa13.49□□□□□ -0.25
TRAPPC4-204ENST00000524797 BACE1P56817 501 aa13.49□□□□□ -0.25
TRAPPC4-204ENST00000524797 MTMR2Q13614 643 aa13.49□□□□□ -0.25
TRAPPC4-204ENST00000524797 TSHZ3Q63HK5 1081 aa13.49□□□□□ -0.25
TRAPPC4-204ENST00000524797 ZSCAN25Q6NSZ9 544 aa13.49□□□□□ -0.25
TRAPPC4-204ENST00000524797 DCP1AQ9NPI6 582 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC4-204ENST00000524797 PRKAB2O43741 272 aa13.48□□□□□ -0.25
TRAPPC4-204ENST00000524797 GH2P01242 217 aa13.48□□□□□ -0.25
TRAPPC4-204ENST00000524797 SHMT1P34896 483 aa13.48□□□□□ -0.25
TRAPPC4-204ENST00000524797 EVX2Q03828 476 aa13.48□□□□□ -0.25
TRAPPC4-204ENST00000524797 PABPC4Q13310 644 aaKnown RBP eCLIP13.48□□□□□ -0.258e-8■■■■□ 23
TRAPPC4-204ENST00000524797 MCM9Q9NXL9 1143 aa13.48□□□□□ -0.25
TRAPPC4-204ENST00000524797 TMOD4Q9NZQ9 345 aa13.48□□□□□ -0.25
TRAPPC4-204ENST00000524797 DOCK3Q8IZD9 2030 aa13.48□□□□□ -0.25
TRAPPC4-204ENST00000524797 C19orf81C9J6K1 198 aa13.47□□□□□ -0.25
TRAPPC4-204ENST00000524797 FMNL1O95466 1100 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC4-204ENST00000524797 CYP2D6P10635 497 aa13.47□□□□□ -0.25
TRAPPC4-204ENST00000524797 OSBPP22059 807 aa13.47□□□□□ -0.25
TRAPPC4-204ENST00000524797 GABPAQ06546 454 aa13.47□□□□□ -0.25
TRAPPC4-204ENST00000524797 CERKLQ49MI3 558 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC4-204ENST00000524797 SMCR8Q8TEV9 937 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC4-204ENST00000524797 SRRDQ9UH36 339 aa13.47□□□□□ -0.25
TRAPPC4-204ENST00000524797 TTC41PQ6P2S7 1318 aa13.47□□□□□ -0.25
TRAPPC4-204ENST00000524797 USP17L10C9JJH3 530 aa13.47□□□□□ -0.25
TRAPPC4-204ENST00000524797 HOXD10P28358 340 aa13.47□□□□□ -0.25
TRAPPC4-204ENST00000524797 FCGRTP55899 365 aa13.47□□□□□ -0.25
TRAPPC4-204ENST00000524797 ABCB5Q2M3G0 1257 aa13.47□□□□□ -0.25
TRAPPC4-204ENST00000524797 SLC9C1Q4G0N8 1177 aa13.47□□□□□ -0.25
TRAPPC4-204ENST00000524797 KBTBD3Q8NAB2 608 aa13.47□□□□□ -0.25
TRAPPC4-204ENST00000524797 ZNF333Q96JL9 665 aa13.47□□□□□ -0.25
TRAPPC4-204ENST00000524797 ASCC2Q9H1I8 757 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC4-204ENST00000524797 ATP8A2Q9NTI2 1148 aa13.47□□□□□ -0.25
TRAPPC4-204ENST00000524797 MYPNQ86TC9 1320 aa13.46□□□□□ -0.25
TRAPPC4-204ENST00000524797 USP17L2Q6R6M4 530 aa13.46□□□□□ -0.25
TRAPPC4-204ENST00000524797 OTUD7AQ8TE49 926 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC4-204ENST00000524797 GCLCP48506 637 aaPredicted RBP13.45□□□□□ -0.26
TRAPPC4-204ENST00000524797 ANKRD13CQ8N6S4 541 aa13.45□□□□□ -0.26
TRAPPC4-204ENST00000524797 PUS7LQ9H0K6 701 aaKnown RBP13.45□□□□□ -0.26
TRAPPC4-204ENST00000524797 SLC4A4Q9Y6R1 1079 aa13.45□□□□□ -0.26
TRAPPC4-204ENST00000524797 PLXNB2O15031 1838 aa13.45□□□□□ -0.26
TRAPPC4-204ENST00000524797 POTEFA5A3E0 1075 aa13.45□□□□□ -0.26
TRAPPC4-204ENST00000524797 HOXA7P31268 230 aaPredicted RBP13.45□□□□□ -0.26
TRAPPC4-204ENST00000524797 GUCY1A2P33402 732 aa13.45□□□□□ -0.26
TRAPPC4-204ENST00000524797 HDAC1Q13547 482 aaPredicted RBP13.45□□□□□ -0.26
TRAPPC4-204ENST00000524797 FAM110CQ1W6H9 321 aa13.45□□□□□ -0.26
TRAPPC4-204ENST00000524797 NBPF11Q86T75 865 aa13.45□□□□□ -0.26
TRAPPC4-204ENST00000524797 PI4K2BQ8TCG2 481 aa13.45□□□□□ -0.26
TRAPPC4-204ENST00000524797 SH3TC2Q8TF17 1288 aa13.45□□□□□ -0.26
TRAPPC4-204ENST00000524797 CABP5Q9NP86 173 aa13.45□□□□□ -0.26
TRAPPC4-204ENST00000524797 EMILIN3Q9NT22 766 aa13.45□□□□□ -0.26
TRAPPC4-204ENST00000524797 TAOK2Q9UL54 1235 aa13.45□□□□□ -0.26
TRAPPC4-204ENST00000524797 SALL3Q9BXA9 1300 aa13.44□□□□□ -0.26
TRAPPC4-204ENST00000524797 RNF113AO15541 343 aaKnown RBP13.44□□□□□ -0.26
TRAPPC4-204ENST00000524797 IRX3P78415 501 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC4-204ENST00000524797 PRKCZQ05513 592 aa13.44□□□□□ -0.26
TRAPPC4-204ENST00000524797 RAB3GAP1Q15042 981 aa13.44□□□□□ -0.26
TRAPPC4-204ENST00000524797 SLC44A5Q8NCS7 719 aa13.44□□□□□ -0.26
TRAPPC4-204ENST00000524797 DYNLL2Q96FJ2 89 aa13.44□□□□□ -0.26
TRAPPC4-204ENST00000524797 C12orf42Q96LP6 360 aa13.44□□□□□ -0.26
TRAPPC4-204ENST00000524797 SWAP70Q9UH65 585 aa13.44□□□□□ -0.26
TRAPPC4-204ENST00000524797 GABRQQ9UN88 632 aa13.44□□□□□ -0.26
TRAPPC4-204ENST00000524797 CYP2D7A0A087X1C5 515 aa13.43□□□□□ -0.26
TRAPPC4-204ENST00000524797 ERC2O15083 957 aa13.43□□□□□ -0.26
TRAPPC4-204ENST00000524797 AAMPQ13685 434 aa13.43□□□□□ -0.26
TRAPPC4-204ENST00000524797 C12orf60Q5U649 245 aa13.43□□□□□ -0.26
TRAPPC4-204ENST00000524797 RAET1EQ8TD07 263 aa13.43□□□□□ -0.26
TRAPPC4-204ENST00000524797 ACER1Q8TDN7 264 aa13.43□□□□□ -0.26
TRAPPC4-204ENST00000524797 APPBP2Q92624 585 aa13.43□□□□□ -0.26
TRAPPC4-204ENST00000524797 GCC1Q96CN9 775 aa13.43□□□□□ -0.26
TRAPPC4-204ENST00000524797 STRBPQ96SI9 672 aaKnown RBP13.43□□□□□ -0.26
TRAPPC4-204ENST00000524797 P2RX7Q99572 595 aaKnown RBP13.43□□□□□ -0.26
TRAPPC4-204ENST00000524797 FEZ1Q99689 392 aa13.43□□□□□ -0.26
TRAPPC4-204ENST00000524797 KIAA0100Q14667 2235 aaKnown RBP13.43□□□□□ -0.26
TRAPPC4-204ENST00000524797 GREB1LQ9C091 1923 aaPredicted RBP13.43□□□□□ -0.26
TRAPPC4-204ENST00000524797 TNPO2O14787 897 aaKnown RBP13.43□□□□□ -0.26
TRAPPC4-204ENST00000524797 GLRX3O76003 335 aaKnown RBP13.43□□□□□ -0.26
TRAPPC4-204ENST00000524797 ZFYP08048 801 aaPredicted RBP13.43□□□□□ -0.26
TRAPPC4-204ENST00000524797 MX1P20591 662 aa13.43□□□□□ -0.26
TRAPPC4-204ENST00000524797 SEPT2Q15019 361 aa13.43□□□□□ -0.26
TRAPPC4-204ENST00000524797 ZYXQ15942 572 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms