RNA–Protein interactions for RNA: ENST00000523991.5

MDM2-222, Transcript of MDM2 proto-oncogene, human

TSL 1 (best)

Gene MDM2, Length 505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MDM2-222	ENST00000523991	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	10.78	□□□□□ -0.68
MDM2-222	ENST00000523991	TMOD4	Q9NZQ9	345 aa		10.78	□□□□□ -0.68
MDM2-222	ENST00000523991	DDX20	Q9UHI6	824 aa	Known RBP	10.78	□□□□□ -0.68
MDM2-222	ENST00000523991	SALL1	Q9NSC2	1324 aa		10.78	□□□□□ -0.68
MDM2-222	ENST00000523991	RFX7	Q2KHR2	1363 aa		10.77	□□□□□ -0.68
MDM2-222	ENST00000523991	MAST2	Q6P0Q8	1798 aa		10.77	□□□□□ -0.68
MDM2-222	ENST00000523991	USP17L5	A8MUK1	530 aa		10.77	□□□□□ -0.69
MDM2-222	ENST00000523991	GLRX3	O76003	335 aa	Known RBP	10.77	□□□□□ -0.69
MDM2-222	ENST00000523991	FGFR2	P21802	821 aa		10.77	□□□□□ -0.69
MDM2-222	ENST00000523991	CNGA1	P29973	690 aa		10.77	□□□□□ -0.69
MDM2-222	ENST00000523991	CCL14	Q16627	93 aa		10.77	□□□□□ -0.69
MDM2-222	ENST00000523991	RABL6	Q3YEC7	729 aa	Predicted RBP	10.77	□□□□□ -0.69
MDM2-222	ENST00000523991	GPR142	Q7Z601	462 aa		10.77	□□□□□ -0.69
MDM2-222	ENST00000523991	PLEKHH3	Q7Z736	793 aa		10.77	□□□□□ -0.69
MDM2-222	ENST00000523991	DZIP1	Q86YF9	867 aa	Known RBP	10.77	□□□□□ -0.69
MDM2-222	ENST00000523991	BAD	Q92934	168 aa		10.77	□□□□□ -0.69
MDM2-222	ENST00000523991	RNPC3	Q96LT9	517 aa	Known RBP	10.77	□□□□□ -0.69
MDM2-222	ENST00000523991	BICC1	Q9H694	974 aa	Known RBP	10.77	□□□□□ -0.69
MDM2-222	ENST00000523991	THEG	Q9P2T0	379 aa		10.77	□□□□□ -0.69
MDM2-222	ENST00000523991	AK9	Q5TCS8	1911 aa		10.77	□□□□□ -0.69
MDM2-222	ENST00000523991	SPTBN5	Q9NRC6	3674 aa	Known RBP	10.77	□□□□□ -0.69
MDM2-222	ENST00000523991	LOC285556	D6RIA3	1793 aa		10.76	□□□□□ -0.69
MDM2-222	ENST00000523991	SEMA3E	O15041	775 aa		10.76	□□□□□ -0.69
MDM2-222	ENST00000523991	PPP1R37	O75864	691 aa		10.76	□□□□□ -0.69
MDM2-222	ENST00000523991	HERVK_113	P62684	666 aa		10.76	□□□□□ -0.69
MDM2-222	ENST00000523991	CCDC27	Q2M243	656 aa		10.76	□□□□□ -0.69
MDM2-222	ENST00000523991	MORN1	Q5T089	497 aa		10.76	□□□□□ -0.69
MDM2-222	ENST00000523991	USP38	Q8NB14	1042 aa		10.76	□□□□□ -0.69
MDM2-222	ENST00000523991	ARRDC4	Q8NCT1	418 aa		10.76	□□□□□ -0.69
MDM2-222	ENST00000523991	ADAMTS19	Q8TE59	1207 aa		10.76	□□□□□ -0.69
MDM2-222	ENST00000523991	USP6NL	Q92738	828 aa		10.76	□□□□□ -0.69
MDM2-222	ENST00000523991	KAZALD1	Q96I82	304 aa		10.76	□□□□□ -0.69
MDM2-222	ENST00000523991	UHRF1	Q96T88	793 aa	Predicted RBP	10.76	□□□□□ -0.69
MDM2-222	ENST00000523991	C1QTNF1	Q9BXJ1	281 aa		10.76	□□□□□ -0.69
MDM2-222	ENST00000523991	DENND2A	Q9ULE3	1009 aa		10.76	□□□□□ -0.69
MDM2-222	ENST00000523991	GAK	O14976	1311 aa		10.76	□□□□□ -0.69
MDM2-222	ENST00000523991	IL16	Q14005	1332 aa		10.76	□□□□□ -0.69
MDM2-222	ENST00000523991	KBTBD13	C9JR72	458 aa		10.75	□□□□□ -0.69
MDM2-222	ENST00000523991	VAMP4	O75379	141 aa		10.75	□□□□□ -0.69
MDM2-222	ENST00000523991	NBPF7	P0C2Y1	421 aa	Predicted RBP	10.75	□□□□□ -0.69
MDM2-222	ENST00000523991	SLURP2	P0DP57	97 aa		10.75	□□□□□ -0.69
MDM2-222	ENST00000523991	HOXA7	P31268	230 aa	Predicted RBP	10.75	□□□□□ -0.69
MDM2-222	ENST00000523991	TIE1	P35590	1138 aa		10.75	□□□□□ -0.69
MDM2-222	ENST00000523991	CAP2	P40123	477 aa		10.75	□□□□□ -0.69
MDM2-222	ENST00000523991	BTD	P43251	543 aa		10.75	□□□□□ -0.69
MDM2-222	ENST00000523991	ERVK-9	P63128	1117 aa		10.75	□□□□□ -0.69
MDM2-222	ENST00000523991	ERVK-24	P63145	666 aa		10.75	□□□□□ -0.69
MDM2-222	ENST00000523991	MAP2K5	Q13163	448 aa		10.75	□□□□□ -0.69
MDM2-222	ENST00000523991	GRIN2C	Q14957	1233 aa		10.75	□□□□□ -0.69
MDM2-222	ENST00000523991	EDC3	Q96F86	508 aa	Known RBP	10.75	□□□□□ -0.69
MDM2-222	ENST00000523991	ASB2	Q96Q27	587 aa		10.75	□□□□□ -0.69
MDM2-222	ENST00000523991	GAS2L1	Q99501	681 aa	Predicted RBP	10.75	□□□□□ -0.69
MDM2-222	ENST00000523991	P2RX7	Q99572	595 aa	Known RBP	10.75	□□□□□ -0.69
MDM2-222	ENST00000523991	TXNRD2	Q9NNW7	524 aa		10.75	□□□□□ -0.69
MDM2-222	ENST00000523991	DDX4	Q9NQI0	724 aa	Known RBP	10.75	□□□□□ -0.69
MDM2-222	ENST00000523991	HCN4	Q9Y3Q4	1203 aa		10.75	□□□□□ -0.69
MDM2-222	ENST00000523991	PTPRF	P10586	1907 aa		10.75	□□□□□ -0.69
MDM2-222	ENST00000523991	UTY	O14607	1347 aa		10.75	□□□□□ -0.69
MDM2-222	ENST00000523991	FANCI	Q9NVI1	1328 aa		10.75	□□□□□ -0.69
MDM2-222	ENST00000523991	VCAN	P13611	3396 aa		10.75	□□□□□ -0.69
MDM2-222	ENST00000523991	FAM196B	A6NMK8	535 aa		10.74	□□□□□ -0.69
MDM2-222	ENST00000523991	CCNA1	P78396	465 aa		10.74	□□□□□ -0.69
MDM2-222	ENST00000523991	MRPS5	P82675	430 aa	Known RBP	10.74	□□□□□ -0.69
MDM2-222	ENST00000523991	ATP2B2	Q01814	1243 aa		10.74	□□□□□ -0.69
MDM2-222	ENST00000523991	MTMR2	Q13614	643 aa		10.74	□□□□□ -0.69
MDM2-222	ENST00000523991	SLC39A5	Q6ZMH5	540 aa		10.74	□□□□□ -0.69
MDM2-222	ENST00000523991	WWC1	Q8IX03	1113 aa		10.74	□□□□□ -0.69
MDM2-222	ENST00000523991	KLHDC4	Q8TBB5	520 aa		10.74	□□□□□ -0.69
MDM2-222	ENST00000523991	PPM1E	Q8WY54	764 aa		10.74	□□□□□ -0.69
MDM2-222	ENST00000523991	PAGR1	Q9BTK6	254 aa		10.74	□□□□□ -0.69
MDM2-222	ENST00000523991	PORCN	Q9H237	461 aa		10.74	□□□□□ -0.69
MDM2-222	ENST00000523991	PDLIM7	Q9NR12	457 aa		10.74	□□□□□ -0.69
MDM2-222	ENST00000523991	ARIH1	Q9Y4X5	557 aa	Predicted RBP	10.74	□□□□□ -0.69
MDM2-222	ENST00000523991	PHIP	Q8WWQ0	1821 aa		10.74	□□□□□ -0.69
MDM2-222	ENST00000523991	PLXNB2	O15031	1838 aa		10.73	□□□□□ -0.69
MDM2-222	ENST00000523991	LTBP2	Q14767	1821 aa		10.73	□□□□□ -0.69
MDM2-222	ENST00000523991	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	10.73	□□□□□ -0.69
MDM2-222	ENST00000523991	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	10.73	□□□□□ -0.69
MDM2-222	ENST00000523991	C19orf81	C9J6K1	198 aa		10.73	□□□□□ -0.69
MDM2-222	ENST00000523991	EYA2	O00167	538 aa		10.73	□□□□□ -0.69
MDM2-222	ENST00000523991	DNAJB2	P25686	324 aa		10.73	□□□□□ -0.69
MDM2-222	ENST00000523991	BACE1	P56817	501 aa		10.73	□□□□□ -0.69
MDM2-222	ENST00000523991	NBR1	Q14596	966 aa		10.73	□□□□□ -0.69
MDM2-222	ENST00000523991	TRIM60	Q495X7	471 aa		10.73	□□□□□ -0.69
MDM2-222	ENST00000523991	GJC2	Q5T442	439 aa	Predicted RBP	10.73	□□□□□ -0.69
MDM2-222	ENST00000523991	WDR78	Q5VTH9	848 aa		10.73	□□□□□ -0.69
MDM2-222	ENST00000523991	SPTY2D1	Q68D10	685 aa	Predicted RBP	10.73	□□□□□ -0.69
MDM2-222	ENST00000523991	ANKRD44	Q8N8A2	993 aa		10.73	□□□□□ -0.69
MDM2-222	ENST00000523991	FAM163A	Q96GL9	167 aa	Predicted RBP	10.73	□□□□□ -0.69
MDM2-222	ENST00000523991	WDR18	Q9BV38	432 aa		10.73	□□□□□ -0.69
MDM2-222	ENST00000523991	ZNF576	Q9H609	170 aa		10.73	□□□□□ -0.69
MDM2-222	ENST00000523991	RBPJL	Q9UBG7	517 aa		10.73	□□□□□ -0.69
MDM2-222	ENST00000523991	HERC5	Q9UII4	1024 aa	Known RBP	10.73	□□□□□ -0.69
MDM2-222	ENST00000523991	IVNS1ABP	Q9Y6Y0	642 aa		10.73	□□□□□ -0.69
MDM2-222	ENST00000523991	PEX10	O60683	326 aa		10.72	□□□□□ -0.69
MDM2-222	ENST00000523991	MAP4K4	O95819	1239 aa	Predicted RBP	10.72	□□□□□ -0.69
MDM2-222	ENST00000523991	ASNS	P08243	561 aa		10.72	□□□□□ -0.69
MDM2-222	ENST00000523991	SNX17	Q15036	470 aa		10.72	□□□□□ -0.69
MDM2-222	ENST00000523991	ATP2B3	Q16720	1220 aa		10.72	□□□□□ -0.69
MDM2-222	ENST00000523991		Q3C1V9	767 aa		10.72	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms