RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 LMCD1Q9NZU5 365 aa7.42□□□□□ -1.22
SDC2-208ENST00000523877 LMTK3Q96Q04 1460 aa7.42□□□□□ -1.22
SDC2-208ENST00000523877 URB2Q14146 1524 aaKnown RBP7.42□□□□□ -1.22
SDC2-208ENST00000523877 TRIM64A6NGJ6 449 aa7.41□□□□□ -1.22
SDC2-208ENST00000523877 TRIM64BA6NI03 449 aa7.41□□□□□ -1.22
SDC2-208ENST00000523877 hCG_1984214I3L0E3 225 aa7.41□□□□□ -1.22
SDC2-208ENST00000523877 SGSM2O43147 1006 aa7.41□□□□□ -1.22
SDC2-208ENST00000523877 OPA1O60313 960 aa7.41□□□□□ -1.22
SDC2-208ENST00000523877 EVI5O60447 810 aa7.41□□□□□ -1.22
SDC2-208ENST00000523877 COBLO75128 1261 aa7.41□□□□□ -1.22
SDC2-208ENST00000523877 SKIP12755 728 aa7.41□□□□□ -1.22
SDC2-208ENST00000523877 KRT13P13646 458 aa7.41□□□□□ -1.22
SDC2-208ENST00000523877 EIF4BP23588 611 aaKnown RBP7.41□□□□□ -1.22
SDC2-208ENST00000523877 CAP2P40123 477 aa7.41□□□□□ -1.22
SDC2-208ENST00000523877 MXI1P50539 228 aa7.41□□□□□ -1.22
SDC2-208ENST00000523877 ARPC4P59998 168 aa7.41□□□□□ -1.22
SDC2-208ENST00000523877 NMIQ13287 307 aaPredicted RBP7.41□□□□□ -1.22
SDC2-208ENST00000523877 MOGSQ13724 837 aa7.41□□□□□ -1.22
SDC2-208ENST00000523877 AMHR2Q16671 573 aa7.41□□□□□ -1.22
SDC2-208ENST00000523877 RILPL1Q5EBL4 403 aa7.41□□□□□ -1.22
SDC2-208ENST00000523877 KAZNQ674X7 775 aa7.41□□□□□ -1.22
SDC2-208ENST00000523877 C16orf54Q6UWD8 224 aa7.41□□□□□ -1.22
SDC2-208ENST00000523877 THSD4Q6ZMP0 1018 aa7.41□□□□□ -1.22
SDC2-208ENST00000523877 FBXO33Q7Z6M2 555 aa7.41□□□□□ -1.22
SDC2-208ENST00000523877 LURAP1LQ8IV03 231 aa7.41□□□□□ -1.22
SDC2-208ENST00000523877 LRRC43Q8N309 656 aa7.41□□□□□ -1.22
SDC2-208ENST00000523877 TXLNBQ8N3L3 684 aa7.41□□□□□ -1.22
SDC2-208ENST00000523877 AFAP1Q8N556 730 aa7.41□□□□□ -1.22
SDC2-208ENST00000523877 ZNF483Q8TF39 744 aaPredicted RBP7.41□□□□□ -1.22
SDC2-208ENST00000523877 FBXO41Q8TF61 875 aa7.41□□□□□ -1.22
SDC2-208ENST00000523877 PIBF1Q8WXW3 757 aa7.41□□□□□ -1.22
SDC2-208ENST00000523877 KCNN1Q92952 543 aa7.41□□□□□ -1.22
SDC2-208ENST00000523877 KCNH8Q96L42 1107 aa7.41□□□□□ -1.22
SDC2-208ENST00000523877 NGRNQ9NPE2 291 aaKnown RBP7.41□□□□□ -1.22
SDC2-208ENST00000523877 TCP11L1Q9NUJ3 509 aa7.41□□□□□ -1.22
SDC2-208ENST00000523877 PIH1D1Q9NWS0 290 aaKnown RBP7.41□□□□□ -1.22
SDC2-208ENST00000523877 PRELID1Q9Y255 219 aa7.41□□□□□ -1.22
SDC2-208ENST00000523877 C2CD2Q9Y426 696 aa7.41□□□□□ -1.22
SDC2-208ENST00000523877 ERBB4Q15303 1308 aa7.41□□□□□ -1.22
SDC2-208ENST00000523877 TMEM94Q12767 1356 aa7.41□□□□□ -1.22
SDC2-208ENST00000523877 SOWAHDA6NJG2 315 aa7.4□□□□□ -1.22
SDC2-208ENST00000523877 PDLIM1O00151 329 aa7.4□□□□□ -1.22
SDC2-208ENST00000523877 POLR3GO15318 223 aaPredicted RBP7.4□□□□□ -1.22
SDC2-208ENST00000523877 TSPAN6O43657 245 aa7.4□□□□□ -1.22
SDC2-208ENST00000523877 SFTPCP11686 197 aa7.4□□□□□ -1.22
SDC2-208ENST00000523877 KRT10P13645 584 aa7.4□□□□□ -1.22
SDC2-208ENST00000523877 ZFXP17010 805 aaPredicted RBP7.4□□□□□ -1.22
SDC2-208ENST00000523877 TBC1D8BQ0IIM8 1120 aa7.4□□□□□ -1.22
SDC2-208ENST00000523877 MPP3Q13368 585 aa7.4□□□□□ -1.22
SDC2-208ENST00000523877 MORC3Q14149 939 aa7.4□□□□□ -1.22
SDC2-208ENST00000523877 TNNI3KQ59H18 835 aa7.4□□□□□ -1.22
SDC2-208ENST00000523877 SPATA1Q5VX52 437 aa7.4□□□□□ -1.22
SDC2-208ENST00000523877 NXNQ6DKJ4 435 aa7.4□□□□□ -1.22
SDC2-208ENST00000523877 KSR2Q6VAB6 950 aa7.4□□□□□ -1.22
SDC2-208ENST00000523877 ATF7IPQ6VMQ6 1270 aa7.4□□□□□ -1.22
SDC2-208ENST00000523877 GIGYF2Q6Y7W6 1299 aaKnown RBP7.4□□□□□ -1.22
SDC2-208ENST00000523877 KIAA1328Q86T90 577 aa7.4□□□□□ -1.22
SDC2-208ENST00000523877 ZNF354CQ86Y25 554 aa7.4□□□□□ -1.22
SDC2-208ENST00000523877 TRIM58Q8NG06 486 aa7.4□□□□□ -1.22
SDC2-208ENST00000523877 IPCEF1Q8WWN9 437 aaPredicted RBP7.4□□□□□ -1.22
SDC2-208ENST00000523877 PPP1R9BQ96SB3 815 aa7.4□□□□□ -1.22
SDC2-208ENST00000523877 ZBED2Q9BTP6 218 aa7.4□□□□□ -1.22
SDC2-208ENST00000523877 AP1M1Q9BXS5 423 aa7.4□□□□□ -1.22
SDC2-208ENST00000523877 MRPL9Q9BYD2 267 aaKnown RBP7.4□□□□□ -1.22
SDC2-208ENST00000523877 TSGA10Q9BZW7 698 aa7.4□□□□□ -1.22
SDC2-208ENST00000523877 MMADHCQ9H3L0 296 aaPredicted RBP7.4□□□□□ -1.22
SDC2-208ENST00000523877 SYNCQ9H7C4 482 aa7.4□□□□□ -1.22
SDC2-208ENST00000523877 GDPD2Q9HCC8 539 aa7.4□□□□□ -1.22
SDC2-208ENST00000523877 FANCFQ9NPI8 374 aa7.4□□□□□ -1.22
SDC2-208ENST00000523877 LUZP4Q9P127 313 aa7.4□□□□□ -1.22
SDC2-208ENST00000523877 STK39Q9UEW8 545 aa7.4□□□□□ -1.22
SDC2-208ENST00000523877 CLASP1Q7Z460 1538 aa7.39□□□□□ -1.23
SDC2-208ENST00000523877 ZNF608Q9ULD9 1512 aaPredicted RBP7.39□□□□□ -1.23
SDC2-208ENST00000523877 RASA4BC9J798 803 aa7.39□□□□□ -1.23
SDC2-208ENST00000523877 SOCS7O14512 581 aa7.39□□□□□ -1.23
SDC2-208ENST00000523877 P4HA2O15460 535 aa7.39□□□□□ -1.23
SDC2-208ENST00000523877 GCFC2P16383 781 aaKnown RBP7.39□□□□□ -1.23
SDC2-208ENST00000523877 DESP17661 470 aa7.39□□□□□ -1.23
SDC2-208ENST00000523877 RASA1P20936 1047 aa7.39□□□□□ -1.23
SDC2-208ENST00000523877 MAGEA9P43362 315 aa7.39□□□□□ -1.23
SDC2-208ENST00000523877 CCT8P50990 548 aa7.39□□□□□ -1.23
SDC2-208ENST00000523877 SEC13P55735 322 aa7.39□□□□□ -1.23
SDC2-208ENST00000523877 POLR2FP61218 127 aaKnown RBP7.39□□□□□ -1.23
SDC2-208ENST00000523877 MRPS35P82673 323 aaKnown RBP7.39□□□□□ -1.23
SDC2-208ENST00000523877 PLIN5Q00G26 463 aa7.39□□□□□ -1.23
SDC2-208ENST00000523877 ITIH3Q06033 890 aa7.39□□□□□ -1.23
SDC2-208ENST00000523877 PPP2R5CQ13362 524 aa7.39□□□□□ -1.23
SDC2-208ENST00000523877 SART3Q15020 963 aaKnown RBP7.39□□□□□ -1.23
SDC2-208ENST00000523877 INAQ16352 499 aa7.39□□□□□ -1.23
SDC2-208ENST00000523877 ANO1Q5XXA6 986 aa7.39□□□□□ -1.23
SDC2-208ENST00000523877 HIBCHQ6NVY1 386 aaPredicted RBP7.39□□□□□ -1.23
SDC2-208ENST00000523877 LLGL2Q6P1M3 1020 aa7.39□□□□□ -1.23
SDC2-208ENST00000523877 CCDC129Q6ZRS4 1044 aa7.39□□□□□ -1.23
SDC2-208ENST00000523877 TTC39CQ8N584 583 aa7.39□□□□□ -1.23
SDC2-208ENST00000523877 ANKRD42Q8N9B4 389 aa7.39□□□□□ -1.23
SDC2-208ENST00000523877 LILRB1Q8NHL6 650 aaPredicted RBP7.39□□□□□ -1.23
SDC2-208ENST00000523877 CERKQ8TCT0 537 aa7.39□□□□□ -1.23
SDC2-208ENST00000523877 HPS3Q969F9 1004 aa7.39□□□□□ -1.23
SDC2-208ENST00000523877 DTNBP1Q96EV8 351 aa7.39□□□□□ -1.23
SDC2-208ENST00000523877 C1orf74Q96LT6 269 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms