RNA–Protein interactions for RNA: ENST00000523588.1

CPNE3-207, Transcript of copine 3, humanhuman

TSL 2

Gene CPNE3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-207ENST00000523588 PRAMEF13Q5VWM6 474 aa9.03□□□□□ -0.96
CPNE3-207ENST00000523588 SLC6A19Q695T7 634 aa9.03□□□□□ -0.96
CPNE3-207ENST00000523588 GIMAP7Q8NHV1 300 aa9.03□□□□□ -0.96
CPNE3-207ENST00000523588 NKD1Q969G9 470 aa9.03□□□□□ -0.96
CPNE3-207ENST00000523588 METTL22Q9BUU2 404 aaPredicted RBP9.03□□□□□ -0.96
CPNE3-207ENST00000523588 PRDM10Q9NQV6 1147 aa9.03□□□□□ -0.96
CPNE3-207ENST00000523588 REV1Q9UBZ9 1251 aa9.03□□□□□ -0.96
CPNE3-207ENST00000523588 PCDHB14Q9Y5E9 798 aa9.03□□□□□ -0.96
CPNE3-207ENST00000523588 DNAJA2O60884 412 aa9.02□□□□□ -0.97
CPNE3-207ENST00000523588 SLITRK5O94991 958 aa9.02□□□□□ -0.97
CPNE3-207ENST00000523588 CYP27A1Q02318 531 aa9.02□□□□□ -0.97
CPNE3-207ENST00000523588 FAM214BQ7L5A3 538 aa9.02□□□□□ -0.97
CPNE3-207ENST00000523588 REXO1Q8N1G1 1221 aaKnown RBP9.02□□□□□ -0.97
CPNE3-207ENST00000523588 ACBD3Q9H3P7 528 aa9.02□□□□□ -0.97
CPNE3-207ENST00000523588 EHMT1Q9H9B1 1298 aa9.02□□□□□ -0.97
CPNE3-207ENST00000523588 PIM2Q9P1W9 311 aa9.02□□□□□ -0.97
CPNE3-207ENST00000523588 UPK3BL1B0FP48 263 aa9.01□□□□□ -0.97
CPNE3-207ENST00000523588 UPK3BL2E5RIL1 263 aa9.01□□□□□ -0.97
CPNE3-207ENST00000523588 CLCQ05315 142 aa9.01□□□□□ -0.97
CPNE3-207ENST00000523588 DUSP27Q5VZP5 1158 aa9.01□□□□□ -0.97
CPNE3-207ENST00000523588 MFSD2AQ8NA29 543 aa9.01□□□□□ -0.97
CPNE3-207ENST00000523588 DPH2Q9BQC3 489 aaPredicted RBP9.01□□□□□ -0.97
CPNE3-207ENST00000523588 EOMESO95936 686 aa9□□□□□ -0.97
CPNE3-207ENST00000523588 ERCC5P28715 1186 aaPredicted RBP9□□□□□ -0.97
CPNE3-207ENST00000523588 HOXA10P31260 410 aaPredicted RBP9□□□□□ -0.97
CPNE3-207ENST00000523588 GJA8P48165 433 aa9□□□□□ -0.97
CPNE3-207ENST00000523588 CYP27C1Q4G0S4 372 aa9□□□□□ -0.97
CPNE3-207ENST00000523588 LEMD3Q9Y2U8 911 aa9□□□□□ -0.97
CPNE3-207ENST00000523588 MED26O95402 600 aa8.99□□□□□ -0.97
CPNE3-207ENST00000523588 ZMYM1Q5SVZ6 1142 aa8.99□□□□□ -0.97
CPNE3-207ENST00000523588 GK5Q6ZS86 529 aa8.99□□□□□ -0.97
CPNE3-207ENST00000523588 RIN3Q8TB24 985 aa8.99□□□□□ -0.97
CPNE3-207ENST00000523588 RASGRP4Q8TDF6 673 aa8.99□□□□□ -0.97
CPNE3-207ENST00000523588 HEXIM2Q96MH2 286 aaKnown RBP8.99□□□□□ -0.97
CPNE3-207ENST00000523588 U3KQE9 123 aa8.99□□□□□ -0.97
CPNE3-207ENST00000523588 CHURC1-FNTBB4DL54 471 aa8.98□□□□□ -0.97
CPNE3-207ENST00000523588 FOSL1P15407 271 aa8.98□□□□□ -0.97
CPNE3-207ENST00000523588 MCM4P33991 863 aa8.98□□□□□ -0.97
CPNE3-207ENST00000523588 TNNI2P48788 182 aa8.98□□□□□ -0.97
CPNE3-207ENST00000523588 ZNF165P49910 485 aa8.98□□□□□ -0.97
CPNE3-207ENST00000523588 SLFN12Q8IYM2 578 aa8.98□□□□□ -0.97
CPNE3-207ENST00000523588 FAM13CQ8NE31 585 aa8.98□□□□□ -0.97
CPNE3-207ENST00000523588 XAGE3Q8WTP9 111 aa8.98□□□□□ -0.97
CPNE3-207ENST00000523588 GPRASP2Q96D09 838 aa8.98□□□□□ -0.97
CPNE3-207ENST00000523588 MIPEPQ99797 713 aa8.98□□□□□ -0.97
CPNE3-207ENST00000523588 CNTNAP4Q9C0A0 1308 aa8.98□□□□□ -0.97
CPNE3-207ENST00000523588 SLC22A31A6NKX4 558 aa8.97□□□□□ -0.97
CPNE3-207ENST00000523588 CYP26A1O43174 497 aa8.97□□□□□ -0.97
CPNE3-207ENST00000523588 CD97P48960 835 aa8.97□□□□□ -0.97
CPNE3-207ENST00000523588 LETMD1Q6P1Q0 360 aa8.97□□□□□ -0.97
CPNE3-207ENST00000523588 CCSER2Q9H7U1 834 aa8.97□□□□□ -0.97
CPNE3-207ENST00000523588 KLHL3Q9UH77 587 aa8.97□□□□□ -0.97
CPNE3-207ENST00000523588 COBLO75128 1261 aa8.96□□□□□ -0.98
CPNE3-207ENST00000523588 YARSP54577 528 aaKnown RBP8.96□□□□□ -0.98
CPNE3-207ENST00000523588 INTS5Q6P9B9 1019 aaKnown RBP8.96□□□□□ -0.98
CPNE3-207ENST00000523588 DNAJB8Q8NHS0 232 aa8.96□□□□□ -0.98
CPNE3-207ENST00000523588 PPP1R13LQ8WUF5 828 aa8.96□□□□□ -0.98
CPNE3-207ENST00000523588 LRRC4CQ9HCJ2 640 aa8.96□□□□□ -0.98
CPNE3-207ENST00000523588 GINM1Q9NU53 330 aa8.96□□□□□ -0.98
CPNE3-207ENST00000523588 RBAK-RBAKDNI3L0D1 243 aa8.95□□□□□ -0.98
CPNE3-207ENST00000523588 SSTR4P31391 388 aa8.95□□□□□ -0.98
CPNE3-207ENST00000523588 SOX9P48436 509 aa8.95□□□□□ -0.98
CPNE3-207ENST00000523588 MSMPQ1L6U9 139 aa8.95□□□□□ -0.98
CPNE3-207ENST00000523588 CYB5D2Q8WUJ1 264 aa8.95□□□□□ -0.98
CPNE3-207ENST00000523588 SPATA32Q96LK8 384 aa8.95□□□□□ -0.98
CPNE3-207ENST00000523588 ANTXR1Q9H6X2 564 aa8.95□□□□□ -0.98
CPNE3-207ENST00000523588 GMIPQ9P107 970 aa8.95□□□□□ -0.98
CPNE3-207ENST00000523588 ZC3H7BQ9UGR2 993 aaKnown RBP8.95□□□□□ -0.98
CPNE3-207ENST00000523588 ZNRF3Q9ULT6 936 aa8.95□□□□□ -0.98
CPNE3-207ENST00000523588 INPP5FQ9Y2H2 1132 aa8.95□□□□□ -0.98
CPNE3-207ENST00000523588 KIAA1324LA8MWY0 1029 aaPredicted RBP8.94□□□□□ -0.98
CPNE3-207ENST00000523588 IGF2BP3O00425 579 aaKnown RBP eCLIP8.94□□□□□ -0.98
CPNE3-207ENST00000523588 GRIK1P39086 918 aa8.94□□□□□ -0.98
CPNE3-207ENST00000523588 OXCT1P55809 520 aa8.94□□□□□ -0.98
CPNE3-207ENST00000523588 COL9A2Q14055 689 aaPredicted RBP8.94□□□□□ -0.98
CPNE3-207ENST00000523588 MLECQ14165 292 aa8.94□□□□□ -0.98
CPNE3-207ENST00000523588 OVOS1Q6IE37 1185 aa8.94□□□□□ -0.98
CPNE3-207ENST00000523588 CDH24Q86UP0 819 aa8.94□□□□□ -0.98
CPNE3-207ENST00000523588 FAM181AQ8N9Y4 354 aa8.94□□□□□ -0.98
CPNE3-207ENST00000523588 EFR3BQ9Y2G0 817 aa8.94□□□□□ -0.98
CPNE3-207ENST00000523588 CDCP2Q5VXM1 449 aa8.93□□□□□ -0.98
CPNE3-207ENST00000523588 ATG4CQ96DT6 458 aa8.93□□□□□ -0.98
CPNE3-207ENST00000523588 CNNM2Q9H8M5 875 aa8.93□□□□□ -0.98
CPNE3-207ENST00000523588 MKNK2Q9HBH9 465 aa8.93□□□□□ -0.98
CPNE3-207ENST00000523588 PRDM5Q9NQX1 630 aaPredicted RBP8.93□□□□□ -0.98
CPNE3-207ENST00000523588 GTF2IRD1Q9UHL9 959 aa8.93□□□□□ -0.98
CPNE3-207ENST00000523588 PPT2Q9UMR5 302 aa8.93□□□□□ -0.98
CPNE3-207ENST00000523588 CEP131Q9UPN4 1083 aa8.93□□□□□ -0.98
CPNE3-207ENST00000523588 COL17A1Q9UMD9 1497 aaPredicted RBP8.92□□□□□ -0.98
CPNE3-207ENST00000523588 MEIS3P2A8K0S8 358 aa8.92□□□□□ -0.98
CPNE3-207ENST00000523588 SPINK2P20155 84 aa8.92□□□□□ -0.98
CPNE3-207ENST00000523588 LRP8Q14114 963 aa8.92□□□□□ -0.98
CPNE3-207ENST00000523588 ARSHQ5FYA8 562 aa8.92□□□□□ -0.98
CPNE3-207ENST00000523588 TMEM40Q8WWA1 233 aa8.92□□□□□ -0.98
CPNE3-207ENST00000523588 MAPK8IP1Q9UQF2 711 aa8.92□□□□□ -0.98
CPNE3-207ENST00000523588 HYAL3O43820 417 aaPredicted RBP8.91□□□□□ -0.98
CPNE3-207ENST00000523588 LRRFIP1Q32MZ4 808 aaKnown RBP8.91□□□□□ -0.98
CPNE3-207ENST00000523588 DTX1Q86Y01 620 aa8.91□□□□□ -0.98
CPNE3-207ENST00000523588 PLD6Q8N2A8 252 aaKnown RBP8.91□□□□□ -0.98
CPNE3-207ENST00000523588 BAHD1Q8TBE0 780 aaPredicted RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms