RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 SH3D19Q5HYK7 790 aa19.64■□□□□ 0.73
CLN8-206ENST00000523237 TREML2Q5T2D2 321 aa19.64■□□□□ 0.73
CLN8-206ENST00000523237 TRIM47Q96LD4 638 aa19.64■□□□□ 0.73
CLN8-206ENST00000523237 CTGFP29279 349 aa19.63■□□□□ 0.73
CLN8-206ENST00000523237 FCGRTP55899 365 aa19.63■□□□□ 0.73
CLN8-206ENST00000523237 JAG1P78504 1218 aa19.63■□□□□ 0.73
CLN8-206ENST00000523237 TATDN1Q6P1N9 297 aa19.63■□□□□ 0.73
CLN8-206ENST00000523237 YTHDC1Q96MU7 727 aaKnown RBP19.63■□□□□ 0.73
CLN8-206ENST00000523237 SRRDQ9UH36 339 aa19.63■□□□□ 0.73
CLN8-206ENST00000523237 ZBTB21Q9ULJ3 1066 aa19.63■□□□□ 0.73
CLN8-206ENST00000523237 POLR3DP05423 398 aaPredicted RBP19.62■□□□□ 0.73
CLN8-206ENST00000523237 OSBPP22059 807 aa19.62■□□□□ 0.73
CLN8-206ENST00000523237 ADD2P35612 726 aa19.62■□□□□ 0.73
CLN8-206ENST00000523237 MTMR2Q13614 643 aa19.62■□□□□ 0.73
CLN8-206ENST00000523237 GPATCH3Q96I76 525 aa19.62■□□□□ 0.73
CLN8-206ENST00000523237 ZNF333Q96JL9 665 aa19.62■□□□□ 0.73
CLN8-206ENST00000523237 ECHDC1Q9NTX5 307 aa19.62■□□□□ 0.73
CLN8-206ENST00000523237 TMOD4Q9NZQ9 345 aa19.62■□□□□ 0.73
CLN8-206ENST00000523237 C19orf81C9J6K1 198 aa19.61■□□□□ 0.73
CLN8-206ENST00000523237 BACE1P56817 501 aa19.61■□□□□ 0.73
CLN8-206ENST00000523237 SHROOM1Q2M3G4 852 aaPredicted RBP19.61■□□□□ 0.73
CLN8-206ENST00000523237 LCORLQ8N3X6 602 aa19.61■□□□□ 0.73
CLN8-206ENST00000523237 MCM9Q9NXL9 1143 aa19.61■□□□□ 0.73
CLN8-206ENST00000523237 MYPNQ86TC9 1320 aa19.6■□□□□ 0.73
CLN8-206ENST00000523237 USP17L10C9JJH3 530 aa19.6■□□□□ 0.73
CLN8-206ENST00000523237 GH2P01242 217 aa19.6■□□□□ 0.73
CLN8-206ENST00000523237 PLCD1P51178 756 aa19.6■□□□□ 0.73
CLN8-206ENST00000523237 CERKLQ49MI3 558 aaPredicted RBP19.6■□□□□ 0.73
CLN8-206ENST00000523237 ZSCAN25Q6NSZ9 544 aa19.6■□□□□ 0.73
CLN8-206ENST00000523237 ANKRD13CQ8N6S4 541 aa19.6■□□□□ 0.73
CLN8-206ENST00000523237 RAET1EQ8TD07 263 aa19.6■□□□□ 0.73
CLN8-206ENST00000523237 TMEM106CQ9BVX2 250 aa19.6■□□□□ 0.73
CLN8-206ENST00000523237 PCDHB15Q9Y5E8 787 aa19.6■□□□□ 0.73
CLN8-206ENST00000523237 MYH8P13535 1937 aa19.6■□□□□ 0.73
CLN8-206ENST00000523237 CENPFP49454 3210 aa19.59■□□□□ 0.73
CLN8-206ENST00000523237 BAZ2AQ9UIF9 1905 aaKnown RBP19.59■□□□□ 0.73
CLN8-206ENST00000523237 POTEFA5A3E0 1075 aa19.59■□□□□ 0.73
CLN8-206ENST00000523237 GCLCP48506 637 aaPredicted RBP19.59■□□□□ 0.73
CLN8-206ENST00000523237 UBE3CQ15386 1083 aa19.59■□□□□ 0.73
CLN8-206ENST00000523237 SH3TC2Q8TF17 1288 aa19.59■□□□□ 0.73
CLN8-206ENST00000523237 SDR42E1Q8WUS8 393 aa19.59■□□□□ 0.73
CLN8-206ENST00000523237 ASCC2Q9H1I8 757 aaPredicted RBP19.59■□□□□ 0.73
CLN8-206ENST00000523237 ARMT1Q9H993 441 aa19.59■□□□□ 0.73
CLN8-206ENST00000523237 DCP1AQ9NPI6 582 aaPredicted RBP19.59■□□□□ 0.73
CLN8-206ENST00000523237 MBD4O95243 580 aa19.58■□□□□ 0.72
CLN8-206ENST00000523237 FAM110CQ1W6H9 321 aa19.58■□□□□ 0.72
CLN8-206ENST00000523237 ABCB5Q2M3G0 1257 aa19.58■□□□□ 0.72
CLN8-206ENST00000523237 CABP5Q9NP86 173 aa19.58■□□□□ 0.72
CLN8-206ENST00000523237 ATP8A2Q9NTI2 1148 aa19.58■□□□□ 0.72
CLN8-206ENST00000523237 TNPO2O14787 897 aaKnown RBP19.57■□□□□ 0.72
CLN8-206ENST00000523237 SHMT1P34896 483 aa19.57■□□□□ 0.72
CLN8-206ENST00000523237 IRX3P78415 501 aaPredicted RBP19.57■□□□□ 0.72
CLN8-206ENST00000523237 PRKCZQ05513 592 aa19.57■□□□□ 0.72
CLN8-206ENST00000523237 SLFNL1Q499Z3 407 aa19.57■□□□□ 0.72
CLN8-206ENST00000523237 KIAA0100Q14667 2235 aaKnown RBP19.56■□□□□ 0.72
CLN8-206ENST00000523237 HOXA7P31268 230 aaPredicted RBP19.56■□□□□ 0.72
CLN8-206ENST00000523237 GRK4P32298 578 aa19.56■□□□□ 0.72
CLN8-206ENST00000523237 GABPAQ06546 454 aa19.56■□□□□ 0.72
CLN8-206ENST00000523237 RAB3GAP1Q15042 981 aa19.56■□□□□ 0.72
CLN8-206ENST00000523237 USP17L2Q6R6M4 530 aa19.56■□□□□ 0.72
CLN8-206ENST00000523237 DDRGK1Q96HY6 314 aa19.56■□□□□ 0.72
CLN8-206ENST00000523237 FEZ1Q99689 392 aa19.56■□□□□ 0.72
CLN8-206ENST00000523237 TAOK2Q9UL54 1235 aa19.56■□□□□ 0.72
CLN8-206ENST00000523237 PRKAB2O43741 272 aa19.55■□□□□ 0.72
CLN8-206ENST00000523237 MYCP01106 439 aaPredicted RBP19.55■□□□□ 0.72
CLN8-206ENST00000523237 CRBNQ96SW2 442 aa19.55■□□□□ 0.72
CLN8-206ENST00000523237 GABRQQ9UN88 632 aa19.55■□□□□ 0.72
CLN8-206ENST00000523237 DOCK3Q8IZD9 2030 aa19.54■□□□□ 0.72
CLN8-206ENST00000523237 CHGBP05060 677 aa19.54■□□□□ 0.72
CLN8-206ENST00000523237 EN2P19622 333 aaPredicted RBP19.54■□□□□ 0.72
CLN8-206ENST00000523237 TSHZ3Q63HK5 1081 aa19.54■□□□□ 0.72
CLN8-206ENST00000523237 AMOTL1Q8IY63 956 aa19.54■□□□□ 0.72
CLN8-206ENST00000523237 KBTBD3Q8NAB2 608 aa19.54■□□□□ 0.72
CLN8-206ENST00000523237 SLAIN1Q8ND83 568 aa19.54■□□□□ 0.72
CLN8-206ENST00000523237 COA7Q96BR5 231 aa19.54■□□□□ 0.72
CLN8-206ENST00000523237 EMILIN3Q9NT22 766 aa19.54■□□□□ 0.72
CLN8-206ENST00000523237 SWAP70Q9UH65 585 aa19.54■□□□□ 0.72
CLN8-206ENST00000523237 PDE4DIPQ5VU43 2346 aa19.54■□□□□ 0.72
CLN8-206ENST00000523237 TTC41PQ6P2S7 1318 aa19.53■□□□□ 0.72
CLN8-206ENST00000523237 CYP2D6P10635 497 aa19.53■□□□□ 0.72
CLN8-206ENST00000523237 FLT3LGP49771 235 aa19.53■□□□□ 0.72
CLN8-206ENST00000523237 USP14P54578 494 aa19.53■□□□□ 0.72
CLN8-206ENST00000523237 EVX2Q03828 476 aa19.53■□□□□ 0.72
CLN8-206ENST00000523237 ZYXQ15942 572 aaKnown RBP19.53■□□□□ 0.72
CLN8-206ENST00000523237 C12orf42Q96LP6 360 aa19.53■□□□□ 0.72
CLN8-206ENST00000523237 P2RX7Q99572 595 aaKnown RBP19.53■□□□□ 0.72
CLN8-206ENST00000523237 KIAA1683Q9H0B3 1180 aa19.53■□□□□ 0.72
CLN8-206ENST00000523237 PUS7LQ9H0K6 701 aaKnown RBP19.53■□□□□ 0.72
CLN8-206ENST00000523237 MORF4L1Q9UBU8 362 aa19.53■□□□□ 0.72
CLN8-206ENST00000523237 BIN2Q9UBW5 565 aaPredicted RBP19.53■□□□□ 0.72
CLN8-206ENST00000523237 SLC4A4Q9Y6R1 1079 aa19.53■□□□□ 0.72
CLN8-206ENST00000523237 MPHOSPH10O00566 681 aaKnown RBP19.52■□□□□ 0.72
CLN8-206ENST00000523237 ERC2O15083 957 aa19.52■□□□□ 0.72
CLN8-206ENST00000523237 HERVK_113P62684 666 aa19.52■□□□□ 0.72
CLN8-206ENST00000523237 IRF5Q13568 498 aa19.52■□□□□ 0.72
CLN8-206ENST00000523237 GTF3C2Q8WUA4 911 aaPredicted RBP19.52■□□□□ 0.72
CLN8-206ENST00000523237 ZBTB47Q9UFB7 747 aaPredicted RBP19.52■□□□□ 0.72
CLN8-206ENST00000523237 ADCY3O60266 1144 aa19.51■□□□□ 0.71
CLN8-206ENST00000523237 ZFYP08048 801 aaPredicted RBP19.51■□□□□ 0.71
CLN8-206ENST00000523237 GUCY1A2P33402 732 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms