RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 ELNP15502 786 aa12.44□□□□□ -0.42
CTNNA1-235ENST00000522730 FLT3LGP49771 235 aa12.44□□□□□ -0.42
CTNNA1-235ENST00000522730 PABPC4Q13310 644 aaKnown RBP eCLIP12.44□□□□□ -0.42
CTNNA1-235ENST00000522730 SLC9C2Q5TAH2 1124 aa12.44□□□□□ -0.42
CTNNA1-235ENST00000522730 C20orf194Q5TEA3 1177 aa12.44□□□□□ -0.42
CTNNA1-235ENST00000522730 PROCA1Q8NCQ7 364 aaPredicted RBP12.44□□□□□ -0.42
CTNNA1-235ENST00000522730 RNF208Q9H0X6 261 aa12.44□□□□□ -0.42
CTNNA1-235ENST00000522730 ASCC2Q9H1I8 757 aaPredicted RBP12.44□□□□□ -0.42
CTNNA1-235ENST00000522730 MAGEB6P1A0A0J9YX57 407 aa12.43□□□□□ -0.42
CTNNA1-235ENST00000522730 GH2P01242 217 aa12.43□□□□□ -0.42
CTNNA1-235ENST00000522730 POLR3DP05423 398 aaPredicted RBP12.43□□□□□ -0.42
CTNNA1-235ENST00000522730 UBXN2AP68543 259 aa12.43□□□□□ -0.42
CTNNA1-235ENST00000522730 IRX3P78415 501 aaPredicted RBP12.43□□□□□ -0.42
CTNNA1-235ENST00000522730 TTF1Q15361 905 aaPredicted RBP12.43□□□□□ -0.42
CTNNA1-235ENST00000522730 ZYXQ15942 572 aaKnown RBP12.43□□□□□ -0.42
CTNNA1-235ENST00000522730 COA7Q96BR5 231 aa12.43□□□□□ -0.42
CTNNA1-235ENST00000522730 EDC3Q96F86 508 aaKnown RBP12.43□□□□□ -0.42
CTNNA1-235ENST00000522730 TBC1D2Q9BYX2 928 aa12.43□□□□□ -0.42
CTNNA1-235ENST00000522730 BOLA2Q9H3K6 86 aa12.43□□□□□ -0.42
CTNNA1-235ENST00000522730 CHMP4BQ9H444 224 aaKnown RBP12.43□□□□□ -0.42
CTNNA1-235ENST00000522730 DNAJC18Q9H819 358 aa12.43□□□□□ -0.42
CTNNA1-235ENST00000522730 BRCA2P51587 3418 aa12.43□□□□□ -0.42
CTNNA1-235ENST00000522730 USP17L10C9JJH3 530 aa12.42□□□□□ -0.42
CTNNA1-235ENST00000522730 SMARCA5O60264 1052 aaPredicted RBP12.42□□□□□ -0.42
CTNNA1-235ENST00000522730 PEX10O60683 326 aa12.42□□□□□ -0.42
CTNNA1-235ENST00000522730 RAB11FIP3O75154 756 aa12.42□□□□□ -0.42
CTNNA1-235ENST00000522730 BACE1P56817 501 aa12.42□□□□□ -0.42
CTNNA1-235ENST00000522730 RAB3GAP1Q15042 981 aa12.42□□□□□ -0.42
CTNNA1-235ENST00000522730 TTC6Q86TZ1 520 aa12.42□□□□□ -0.42
CTNNA1-235ENST00000522730 P2RX7Q99572 595 aaKnown RBP12.42□□□□□ -0.42
CTNNA1-235ENST00000522730 WDR18Q9BV38 432 aa12.42□□□□□ -0.42
CTNNA1-235ENST00000522730 ZBTB21Q9ULJ3 1066 aa12.42□□□□□ -0.42
CTNNA1-235ENST00000522730 ZNF532Q9HCE3 1301 aa12.41□□□□□ -0.42
CTNNA1-235ENST00000522730 COL2A1P02458 1487 aaPredicted RBP12.41□□□□□ -0.42
CTNNA1-235ENST00000522730 IGSF3O75054 1194 aa12.41□□□□□ -0.42
CTNNA1-235ENST00000522730 PDE6AP16499 860 aa12.41□□□□□ -0.42
CTNNA1-235ENST00000522730 GCLCP48506 637 aaPredicted RBP12.41□□□□□ -0.42
CTNNA1-235ENST00000522730 PLCD1P51178 756 aa12.41□□□□□ -0.42
CTNNA1-235ENST00000522730 DOCK1Q14185 1865 aa12.41□□□□□ -0.42
CTNNA1-235ENST00000522730 SLFNL1Q499Z3 407 aa12.41□□□□□ -0.42
CTNNA1-235ENST00000522730 CERKLQ49MI3 558 aaPredicted RBP12.41□□□□□ -0.42
CTNNA1-235ENST00000522730 METTL16Q86W50 562 aaKnown RBP12.41□□□□□ -0.42
CTNNA1-235ENST00000522730 CERS3Q8IU89 383 aa12.41□□□□□ -0.42
CTNNA1-235ENST00000522730 CCAR1Q8IX12 1150 aaKnown RBP12.41□□□□□ -0.42
CTNNA1-235ENST00000522730 SLAIN1Q8ND83 568 aa12.41□□□□□ -0.42
CTNNA1-235ENST00000522730 DPF3Q92784 378 aa12.41□□□□□ -0.42
CTNNA1-235ENST00000522730 FEZ1Q99689 392 aa12.41□□□□□ -0.42
CTNNA1-235ENST00000522730 CRNKL1Q9BZJ0 848 aaKnown RBP12.41□□□□□ -0.42
CTNNA1-235ENST00000522730 UNC93B1Q9H1C4 597 aa12.41□□□□□ -0.42
CTNNA1-235ENST00000522730 SERPINB13Q9UIV8 391 aa12.41□□□□□ -0.42
CTNNA1-235ENST00000522730 MYO5AQ9Y4I1 1855 aaKnown RBP12.4□□□□□ -0.42
CTNNA1-235ENST00000522730 C19orf81C9J6K1 198 aa12.4□□□□□ -0.42
CTNNA1-235ENST00000522730 MPHOSPH10O00566 681 aaKnown RBP12.4□□□□□ -0.42
CTNNA1-235ENST00000522730 TFRCP02786 760 aaKnown RBP12.4□□□□□ -0.42
CTNNA1-235ENST00000522730 INHAP05111 366 aa12.4□□□□□ -0.42
CTNNA1-235ENST00000522730 FAM110CQ1W6H9 321 aa12.4□□□□□ -0.42
CTNNA1-235ENST00000522730 ABCB5Q2M3G0 1257 aa12.4□□□□□ -0.42
CTNNA1-235ENST00000522730 SH3D19Q5HYK7 790 aa12.4□□□□□ -0.42
CTNNA1-235ENST00000522730 PAGR1Q9BTK6 254 aa12.4□□□□□ -0.42
CTNNA1-235ENST00000522730 ARMT1Q9H993 441 aa12.4□□□□□ -0.42
CTNNA1-235ENST00000522730 CABP5Q9NP86 173 aa12.4□□□□□ -0.42
CTNNA1-235ENST00000522730 PAG1Q9NWQ8 432 aa12.4□□□□□ -0.42
CTNNA1-235ENST00000522730 MCM9Q9NXL9 1143 aa12.4□□□□□ -0.42
CTNNA1-235ENST00000522730 GJB1P08034 283 aa12.39□□□□□ -0.43
CTNNA1-235ENST00000522730 PDE3AQ14432 1141 aa12.39□□□□□ -0.43
CTNNA1-235ENST00000522730 USP17L2Q6R6M4 530 aa12.39□□□□□ -0.43
CTNNA1-235ENST00000522730 LCORLQ8N3X6 602 aa12.39□□□□□ -0.43
CTNNA1-235ENST00000522730 GPRC5AQ8NFJ5 357 aa12.39□□□□□ -0.43
CTNNA1-235ENST00000522730 NKX2-3Q8TAU0 364 aa12.39□□□□□ -0.43
CTNNA1-235ENST00000522730 SDR42E1Q8WUS8 393 aa12.39□□□□□ -0.43
CTNNA1-235ENST00000522730 RIOK1Q9BRS2 568 aaKnown RBP12.39□□□□□ -0.43
CTNNA1-235ENST00000522730 CWC22Q9HCG8 908 aaKnown RBP12.39□□□□□ -0.43
CTNNA1-235ENST00000522730 EMILIN3Q9NT22 766 aa12.39□□□□□ -0.43
CTNNA1-235ENST00000522730 CEP290O15078 2479 aa12.38□□□□□ -0.43
CTNNA1-235ENST00000522730 PRKAB2O43741 272 aa12.38□□□□□ -0.43
CTNNA1-235ENST00000522730 SLC34A2O95436 690 aa12.38□□□□□ -0.43
CTNNA1-235ENST00000522730 CYP2D6P10635 497 aa12.38□□□□□ -0.43
CTNNA1-235ENST00000522730 ATP5JP18859 108 aa12.38□□□□□ -0.43
CTNNA1-235ENST00000522730 CYP2B6P20813 491 aa12.38□□□□□ -0.43
CTNNA1-235ENST00000522730 HERVK_113P62684 666 aa12.38□□□□□ -0.43
CTNNA1-235ENST00000522730 EVX2Q03828 476 aa12.38□□□□□ -0.43
CTNNA1-235ENST00000522730 TATDN1Q6P1N9 297 aa12.38□□□□□ -0.43
CTNNA1-235ENST00000522730 ACER1Q8TDN7 264 aa12.38□□□□□ -0.43
CTNNA1-235ENST00000522730 DEFB118Q96PH6 123 aa12.38□□□□□ -0.43
CTNNA1-235ENST00000522730 LRRCC1Q9C099 1032 aa12.38□□□□□ -0.43
CTNNA1-235ENST00000522730 GINM1Q9NU53 330 aa12.38□□□□□ -0.43
CTNNA1-235ENST00000522730 PHIPQ8WWQ0 1821 aa12.38□□□□□ -0.43
CTNNA1-235ENST00000522730 TCRBV5S4A2TA0A5A2 114 aa12.37□□□□□ -0.43
CTNNA1-235ENST00000522730 H0YGN5 161 aa12.37□□□□□ -0.43
CTNNA1-235ENST00000522730 MBD4O95243 580 aa12.37□□□□□ -0.43
CTNNA1-235ENST00000522730 CHGBP05060 677 aa12.37□□□□□ -0.43
CTNNA1-235ENST00000522730 HOXA7P31268 230 aaPredicted RBP12.37□□□□□ -0.43
CTNNA1-235ENST00000522730 SHMT1P34896 483 aa12.37□□□□□ -0.43
CTNNA1-235ENST00000522730 GJA8P48165 433 aa12.37□□□□□ -0.43
CTNNA1-235ENST00000522730 IRF5Q13568 498 aa12.37□□□□□ -0.43
CTNNA1-235ENST00000522730 TMED8Q6PL24 325 aaPredicted RBP12.37□□□□□ -0.43
CTNNA1-235ENST00000522730 U2AF1L4Q8WU68 220 aaKnown RBP12.37□□□□□ -0.43
CTNNA1-235ENST00000522730 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.37□□□□□ -0.43
CTNNA1-235ENST00000522730 SHISA4Q96DD7 197 aa12.37□□□□□ -0.43
CTNNA1-235ENST00000522730 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms