RNA–Protein interactions for RNA: ENST00000522653.5

TCF7-223, Transcript of transcription factor 7, human

TSL 2

Gene TCF7, Length 5,340 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF7-223	ENST00000522653	FOS	P01100	380 aa	Predicted RBP	11.54	□□□□□ -0.56
TCF7-223	ENST00000522653	POLR2M	P0CAP2	368 aa		11.54	□□□□□ -0.56
TCF7-223	ENST00000522653	SP4	Q02446	784 aa		11.54	□□□□□ -0.56
TCF7-223	ENST00000522653	RRAGB	Q5VZM2	374 aa		11.54	□□□□□ -0.56
TCF7-223	ENST00000522653	GJD4	Q96KN9	370 aa	Predicted RBP	11.54	□□□□□ -0.56
TCF7-223	ENST00000522653	NACC1	Q96RE7	527 aa		11.54	□□□□□ -0.56
TCF7-223	ENST00000522653	ZNF341	Q9BYN7	854 aa		11.54	□□□□□ -0.56
TCF7-223	ENST00000522653	TXNDC16	Q9P2K2	825 aa		11.54	□□□□□ -0.56
TCF7-223	ENST00000522653	KBTBD13	C9JR72	458 aa		11.53	□□□□□ -0.56
TCF7-223	ENST00000522653		M0R2C6	588 aa		11.53	□□□□□ -0.56
TCF7-223	ENST00000522653	ACTN1	P12814	892 aa		11.53	□□□□□ -0.56
TCF7-223	ENST00000522653	PTGS1	P23219	599 aa		11.53	□□□□□ -0.56
TCF7-223	ENST00000522653	DNAI1	Q9UI46	699 aa		11.53	□□□□□ -0.56
TCF7-223	ENST00000522653	XPA	P23025	273 aa	Predicted RBP	11.53	□□□□□ -0.56
TCF7-223	ENST00000522653	ARL1	P40616	181 aa	Predicted RBP	11.53	□□□□□ -0.56
TCF7-223	ENST00000522653	UBE4A	Q14139	1066 aa		11.53	□□□□□ -0.56
TCF7-223	ENST00000522653	ANO6	Q4KMQ2	910 aa		11.53	□□□□□ -0.56
TCF7-223	ENST00000522653	DTHD1	Q6ZMT9	781 aa		11.53	□□□□□ -0.56
TCF7-223	ENST00000522653	PSMD1	Q99460	953 aa		11.53	□□□□□ -0.56
TCF7-223	ENST00000522653	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	11.53	□□□□□ -0.56
TCF7-223	ENST00000522653	FAM169A	Q9Y6X4	670 aa		11.53	□□□□□ -0.56
TCF7-223	ENST00000522653	DAPK3	O43293	454 aa		11.53	□□□□□ -0.56
TCF7-223	ENST00000522653	ASIC1	P78348	528 aa		11.53	□□□□□ -0.56
TCF7-223	ENST00000522653	CERKL	Q49MI3	558 aa	Predicted RBP	11.53	□□□□□ -0.56
TCF7-223	ENST00000522653	CPXCR1	Q8N123	301 aa		11.53	□□□□□ -0.56
TCF7-223	ENST00000522653	ALG1	Q9BT22	464 aa		11.53	□□□□□ -0.56
TCF7-223	ENST00000522653	ZBTB21	Q9ULJ3	1066 aa		11.53	□□□□□ -0.56
TCF7-223	ENST00000522653	ZNF233	A6NK53	670 aa		11.53	□□□□□ -0.56
TCF7-223	ENST00000522653	CCDC169	A6NNP5	214 aa		11.53	□□□□□ -0.56
TCF7-223	ENST00000522653	KCNJ6	P48051	423 aa		11.53	□□□□□ -0.56
TCF7-223	ENST00000522653	VWA3B	Q502W6	1294 aa		11.53	□□□□□ -0.56
TCF7-223	ENST00000522653	GIMAP8	Q8ND71	665 aa	Predicted RBP	11.53	□□□□□ -0.56
TCF7-223	ENST00000522653	SELENOO	Q9BVL4	669 aa		11.53	□□□□□ -0.56
TCF7-223	ENST00000522653	INO80B	Q9C086	356 aa	Predicted RBP	11.53	□□□□□ -0.56
TCF7-223	ENST00000522653	FTO	Q9C0B1	505 aa	Known RBP eCLIP	11.53	□□□□□ -0.56
TCF7-223	ENST00000522653	USP17L3	A6NCW0	530 aa		11.52	□□□□□ -0.56
TCF7-223	ENST00000522653	USP17L4	A6NCW7	530 aa		11.52	□□□□□ -0.56
TCF7-223	ENST00000522653	EBAG9	O00559	213 aa		11.52	□□□□□ -0.56
TCF7-223	ENST00000522653	GJB2	P29033	226 aa		11.52	□□□□□ -0.56
TCF7-223	ENST00000522653	USP17L1	Q7RTZ2	530 aa		11.52	□□□□□ -0.56
TCF7-223	ENST00000522653	SRGAP1	Q7Z6B7	1085 aa		11.52	□□□□□ -0.56
TCF7-223	ENST00000522653	NUP88	Q99567	741 aa	Predicted RBP	11.52	□□□□□ -0.56
TCF7-223	ENST00000522653	SAP30BP	Q9UHR5	308 aa	Known RBP	11.52	□□□□□ -0.56
TCF7-223	ENST00000522653	DPYSL4	O14531	572 aa		11.52	□□□□□ -0.57
TCF7-223	ENST00000522653	FDX1	P10109	184 aa		11.52	□□□□□ -0.57
TCF7-223	ENST00000522653	CCT6A	P40227	531 aa	Known RBP	11.52	□□□□□ -0.57
TCF7-223	ENST00000522653	GBP6	Q6ZN66	633 aa		11.52	□□□□□ -0.57
TCF7-223	ENST00000522653	FAM160B2	Q86V87	743 aa		11.52	□□□□□ -0.57
TCF7-223	ENST00000522653	MICAL1	Q8TDZ2	1067 aa		11.52	□□□□□ -0.57
TCF7-223	ENST00000522653	GPCPD1	Q9NPB8	672 aa		11.52	□□□□□ -0.57
TCF7-223	ENST00000522653	RNASEL	Q05823	741 aa	Known RBP	11.52	□□□□□ -0.57
TCF7-223	ENST00000522653	KIAA0753	Q2KHM9	967 aa		11.52	□□□□□ -0.57
TCF7-223	ENST00000522653	PPP1R14C	Q8TAE6	165 aa		11.52	□□□□□ -0.57
TCF7-223	ENST00000522653	FLOT1	O75955	427 aa		11.52	□□□□□ -0.57
TCF7-223	ENST00000522653	TNNC2	P02585	160 aa		11.52	□□□□□ -0.57
TCF7-223	ENST00000522653	MCM6	Q14566	821 aa		11.52	□□□□□ -0.57
TCF7-223	ENST00000522653	SV2B	Q7L1I2	683 aa		11.52	□□□□□ -0.57
TCF7-223	ENST00000522653	GINS2	Q9Y248	185 aa		11.52	□□□□□ -0.57
TCF7-223	ENST00000522653	USPL1	Q5W0Q7	1092 aa		11.51	□□□□□ -0.57
TCF7-223	ENST00000522653	CLEC4G	Q6UXB4	293 aa		11.51	□□□□□ -0.57
TCF7-223	ENST00000522653	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	11.51	□□□□□ -0.57
TCF7-223	ENST00000522653	COA1	Q9GZY4	146 aa		11.51	□□□□□ -0.57
TCF7-223	ENST00000522653	GOLGA5	Q8TBA6	731 aa		11.51	□□□□□ -0.57
TCF7-223	ENST00000522653	IQCG	Q9H095	443 aa	Known RBP	11.51	□□□□□ -0.57
TCF7-223	ENST00000522653	SLC12A6	Q9UHW9	1150 aa		11.51	□□□□□ -0.57
TCF7-223	ENST00000522653	ERVV-1	B6SEH8	477 aa		11.51	□□□□□ -0.57
TCF7-223	ENST00000522653	TCP10L2	B9ZVM9	353 aa		11.51	□□□□□ -0.57
TCF7-223	ENST00000522653	TUBB	P07437	444 aa		11.51	□□□□□ -0.57
TCF7-223	ENST00000522653	GPATCH4	Q5T3I0	446 aa	Known RBP	11.51	□□□□□ -0.57
TCF7-223	ENST00000522653	FCHSD1	Q86WN1	690 aa		11.51	□□□□□ -0.57
TCF7-223	ENST00000522653	CCT6B	Q92526	530 aa		11.51	□□□□□ -0.57
TCF7-223	ENST00000522653	LMCD1	Q9NZU5	365 aa		11.51	□□□□□ -0.57
TCF7-223	ENST00000522653	MBD4	O95243	580 aa		11.51	□□□□□ -0.57
TCF7-223	ENST00000522653	AFAP1L2	Q8N4X5	818 aa		11.51	□□□□□ -0.57
TCF7-223	ENST00000522653	KIFC2	Q96AC6	838 aa		11.51	□□□□□ -0.57
TCF7-223	ENST00000522653	KDM3A	Q9Y4C1	1321 aa		11.51	□□□□□ -0.57
TCF7-223	ENST00000522653	CTSW	P56202	376 aa		11.5	□□□□□ -0.57
TCF7-223	ENST00000522653	ABCB5	Q2M3G0	1257 aa		11.5	□□□□□ -0.57
TCF7-223	ENST00000522653	VPS18	Q9P253	973 aa		11.5	□□□□□ -0.57
TCF7-223	ENST00000522653	ZMYM4	Q5VZL5	1548 aa		11.5	□□□□□ -0.57
TCF7-223	ENST00000522653	RPS6KA4	O75676	772 aa		11.5	□□□□□ -0.57
TCF7-223	ENST00000522653	HSPA4	P34932	840 aa		11.5	□□□□□ -0.57
TCF7-223	ENST00000522653	GOLGA8F	Q08AF8	430 aa		11.5	□□□□□ -0.57
TCF7-223	ENST00000522653	GOLGA8DP	Q0D2H9	430 aa		11.5	□□□□□ -0.57
TCF7-223	ENST00000522653	MAP7	Q14244	749 aa		11.5	□□□□□ -0.57
TCF7-223	ENST00000522653	CEP112	Q8N8E3	955 aa		11.5	□□□□□ -0.57
TCF7-223	ENST00000522653	MYCBP	Q99417	103 aa	Predicted RBP	11.5	□□□□□ -0.57
TCF7-223	ENST00000522653	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	11.5	□□□□□ -0.57
TCF7-223	ENST00000522653	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	11.5	□□□□□ -0.57
TCF7-223	ENST00000522653	TMCO5B	A8MYB1	307 aa		11.5	□□□□□ -0.57
TCF7-223	ENST00000522653	SMARCA5	O60264	1052 aa	Predicted RBP	11.5	□□□□□ -0.57
TCF7-223	ENST00000522653	ALDH1A1	P00352	501 aa		11.5	□□□□□ -0.57
TCF7-223	ENST00000522653	HAND2	P61296	217 aa		11.5	□□□□□ -0.57
TCF7-223	ENST00000522653	TYRO3	Q06418	890 aa		11.5	□□□□□ -0.57
TCF7-223	ENST00000522653	RC3H1	Q5TC82	1133 aa	Known RBP	11.5	□□□□□ -0.57
TCF7-223	ENST00000522653	DPH6	Q7L8W6	267 aa		11.5	□□□□□ -0.57
TCF7-223	ENST00000522653	MIER3	Q7Z3K6	550 aa		11.5	□□□□□ -0.57
TCF7-223	ENST00000522653	PLXNC1	O60486	1568 aa		11.5	□□□□□ -0.57
TCF7-223	ENST00000522653	GIGYF1	O75420	1035 aa	Predicted RBP	11.5	□□□□□ -0.57
TCF7-223	ENST00000522653	PHKG2	P15735	406 aa		11.5	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms