RNA–Protein interactions for RNA: ENST00000522515.5

LSM1-204, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 3

Gene LSM1, Length 1,568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-204ENST00000522515 GDF11O95390 407 aa19.23■□□□□ 0.67
LSM1-204ENST00000522515 AKR1B1P15121 316 aa19.23■□□□□ 0.67
LSM1-204ENST00000522515 JAG1P78504 1218 aa19.23■□□□□ 0.67
LSM1-204ENST00000522515 SHROOM1Q2M3G4 852 aaPredicted RBP19.23■□□□□ 0.67
LSM1-204ENST00000522515 MOB2Q70IA6 237 aa19.23■□□□□ 0.67
LSM1-204ENST00000522515 RALYLQ86SE5 291 aaKnown RBP19.23■□□□□ 0.67
LSM1-204ENST00000522515 IL17RAQ96F46 866 aa19.23■□□□□ 0.67
LSM1-204ENST00000522515 KIF2CQ99661 725 aa19.23■□□□□ 0.67
LSM1-204ENST00000522515 PASKQ96RG2 1323 aa19.23■□□□□ 0.67
LSM1-204ENST00000522515 CELF2O95319 508 aaKnown RBP19.23■□□□□ 0.67
LSM1-204ENST00000522515 INPP5BP32019 993 aa19.23■□□□□ 0.67
LSM1-204ENST00000522515 TFAP4Q01664 338 aa19.23■□□□□ 0.67
LSM1-204ENST00000522515 TTLL12Q14166 644 aaPredicted RBP19.23■□□□□ 0.67
LSM1-204ENST00000522515 CST9Q5W186 159 aa19.23■□□□□ 0.67
LSM1-204ENST00000522515 MB21D2Q8IYB1 491 aaPredicted RBP19.23■□□□□ 0.67
LSM1-204ENST00000522515 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.23■□□□□ 0.67
LSM1-204ENST00000522515 ESR2Q92731 530 aa19.23■□□□□ 0.67
LSM1-204ENST00000522515 WRNIP1Q96S55 665 aa19.23■□□□□ 0.67
LSM1-204ENST00000522515 ZSWIM5Q9P217 1185 aa19.23■□□□□ 0.67
LSM1-204ENST00000522515 ANGEL1Q9UNK9 670 aaKnown RBP19.23■□□□□ 0.67
LSM1-204ENST00000522515 CPA1P15085 419 aa19.22■□□□□ 0.67
LSM1-204ENST00000522515 CAP2P40123 477 aa19.22■□□□□ 0.67
LSM1-204ENST00000522515 CYB5R4Q7L1T6 521 aa19.22■□□□□ 0.67
LSM1-204ENST00000522515 CCDC17Q96LX7 622 aa19.22■□□□□ 0.67
LSM1-204ENST00000522515 TSPY2A6NKD2 308 aa19.21■□□□□ 0.67
LSM1-204ENST00000522515 MPHOSPH10O00566 681 aaKnown RBP19.21■□□□□ 0.67
LSM1-204ENST00000522515 CTNND1O60716 968 aaKnown RBP19.21■□□□□ 0.67
LSM1-204ENST00000522515 TSPY3P0CV98 308 aa19.21■□□□□ 0.67
LSM1-204ENST00000522515 TSPY8P0CW00 308 aa19.21■□□□□ 0.67
LSM1-204ENST00000522515 CASTP20810 708 aaKnown RBP19.21■□□□□ 0.67
LSM1-204ENST00000522515 PSMA5P28066 241 aa19.21■□□□□ 0.67
LSM1-204ENST00000522515 MAP3K11Q16584 847 aa19.21■□□□□ 0.67
LSM1-204ENST00000522515 ABCB5Q2M3G0 1257 aa19.21■□□□□ 0.67
LSM1-204ENST00000522515 CHST3Q7LGC8 479 aa19.21■□□□□ 0.67
LSM1-204ENST00000522515 ZKSCAN4Q969J2 545 aaPredicted RBP19.21■□□□□ 0.67
LSM1-204ENST00000522515 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.21■□□□□ 0.67
LSM1-204ENST00000522515 TM6SF1Q9BZW5 370 aa19.21■□□□□ 0.67
LSM1-204ENST00000522515 TRPM7Q96QT4 1865 aa19.21■□□□□ 0.67
LSM1-204ENST00000522515 GH2P01242 217 aa19.2■□□□□ 0.66
LSM1-204ENST00000522515 IREB2P48200 963 aaKnown RBP19.2■□□□□ 0.66
LSM1-204ENST00000522515 ANTXR2P58335 489 aa19.2■□□□□ 0.66
LSM1-204ENST00000522515 FSTL1Q12841 308 aa19.2■□□□□ 0.66
LSM1-204ENST00000522515 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.2■□□□□ 0.66
LSM1-204ENST00000522515 ARMC9Q7Z3E5 817 aa19.2■□□□□ 0.66
LSM1-204ENST00000522515 UPF3BQ9BZI7 483 aaKnown RBP19.2■□□□□ 0.66
LSM1-204ENST00000522515 GBA2Q9HCG7 927 aaPredicted RBP19.2■□□□□ 0.66
LSM1-204ENST00000522515 ZSWIM6Q9HCJ5 1215 aa19.2■□□□□ 0.66
LSM1-204ENST00000522515 PAPPA2Q9BXP8 1791 aa19.2■□□□□ 0.66
LSM1-204ENST00000522515 OTOFQ9HC10 1997 aa19.2■□□□□ 0.66
LSM1-204ENST00000522515 UBE2Q2LH0YL09 131 aa19.19■□□□□ 0.66
LSM1-204ENST00000522515 MAP3K9P80192 1104 aa19.19■□□□□ 0.66
LSM1-204ENST00000522515 BLOC1S2Q6QNY1 142 aa19.19■□□□□ 0.66
LSM1-204ENST00000522515 NEDD1Q8NHV4 660 aa19.19■□□□□ 0.66
LSM1-204ENST00000522515 ZKSCAN3Q9BRR0 538 aa19.19■□□□□ 0.66
LSM1-204ENST00000522515 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.19■□□□□ 0.66
LSM1-204ENST00000522515 ZBTB21Q9ULJ3 1066 aa19.19■□□□□ 0.66
LSM1-204ENST00000522515 PLIN4Q96Q06 1357 aa19.19■□□□□ 0.66
LSM1-204ENST00000522515 NMT2O60551 498 aa19.19■□□□□ 0.66
LSM1-204ENST00000522515 HMGB1P09429 215 aaKnown RBP19.19■□□□□ 0.66
LSM1-204ENST00000522515 GUCY1A2P33402 732 aa19.19■□□□□ 0.66
LSM1-204ENST00000522515 MCM5P33992 734 aa19.19■□□□□ 0.66
LSM1-204ENST00000522515 NT5C2P49902 561 aa19.19■□□□□ 0.66
LSM1-204ENST00000522515 RUFY3Q7L099 469 aa19.19■□□□□ 0.66
LSM1-204ENST00000522515 DHX32Q7L7V1 743 aaKnown RBP19.19■□□□□ 0.66
LSM1-204ENST00000522515 C2orf69Q8N8R5 385 aa19.19■□□□□ 0.66
LSM1-204ENST00000522515 TCEANC2Q96MN5 208 aa19.19■□□□□ 0.66
LSM1-204ENST00000522515 CABP5Q9NP86 173 aa19.19■□□□□ 0.66
LSM1-204ENST00000522515 IL17RBQ9NRM6 502 aa19.19■□□□□ 0.66
LSM1-204ENST00000522515 GREB1LQ9C091 1923 aaPredicted RBP19.18■□□□□ 0.66
LSM1-204ENST00000522515 ATAD5Q96QE3 1844 aa19.18■□□□□ 0.66
LSM1-204ENST00000522515 PRC1O43663 620 aa19.18■□□□□ 0.66
LSM1-204ENST00000522515 RPS6KB1P23443 525 aa19.18■□□□□ 0.66
LSM1-204ENST00000522515 FKBP1BP68106 108 aa19.18■□□□□ 0.66
LSM1-204ENST00000522515 EXOSC10Q01780 885 aaKnown RBP19.18■□□□□ 0.66
LSM1-204ENST00000522515 VGLL4Q14135 290 aa19.18■□□□□ 0.66
LSM1-204ENST00000522515 SEPT2Q15019 361 aa19.18■□□□□ 0.66
LSM1-204ENST00000522515 TMEM179Q6ZVK1 233 aa19.18■□□□□ 0.66
LSM1-204ENST00000522515 CLEC10AQ8IUN9 316 aa19.18■□□□□ 0.66
LSM1-204ENST00000522515 ANKRD13AQ8IZ07 590 aa19.18■□□□□ 0.66
LSM1-204ENST00000522515 SCYL3Q8IZE3 742 aa19.18■□□□□ 0.66
LSM1-204ENST00000522515 CYP46A1Q9Y6A2 500 aa19.18■□□□□ 0.66
LSM1-204ENST00000522515 DOCK1Q14185 1865 aa19.17■□□□□ 0.66
LSM1-204ENST00000522515 IGKV6D-41A0A0C4DH26 115 aa19.17■□□□□ 0.66
LSM1-204ENST00000522515 ASNSP08243 561 aa19.17■□□□□ 0.66
LSM1-204ENST00000522515 RAB3GAP1Q15042 981 aa19.17■□□□□ 0.66
LSM1-204ENST00000522515 NOL9Q5SY16 702 aaKnown RBP19.17■□□□□ 0.66
LSM1-204ENST00000522515 LDLRAD1Q5T700 205 aa19.17■□□□□ 0.66
LSM1-204ENST00000522515 IQCA1Q86XH1 822 aa19.17■□□□□ 0.66
LSM1-204ENST00000522515 CLMNQ96JQ2 1002 aa19.17■□□□□ 0.66
LSM1-204ENST00000522515 LRRC2Q9BYS8 371 aa19.17■□□□□ 0.66
LSM1-204ENST00000522515 TCP11L1Q9NUJ3 509 aa19.17■□□□□ 0.66
LSM1-204ENST00000522515 CCDC84Q86UT8 332 aaPredicted RBP19.16■□□□□ 0.66
LSM1-204ENST00000522515 CEP95Q96GE4 821 aa19.16■□□□□ 0.66
LSM1-204ENST00000522515 ZSCAN10Q96SZ4 725 aaPredicted RBP19.16■□□□□ 0.66
LSM1-204ENST00000522515 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.16■□□□□ 0.66
LSM1-204ENST00000522515 CSADQ9Y600 493 aa19.16■□□□□ 0.66
LSM1-204ENST00000522515 SNCAIPQ9Y6H5 919 aa19.16■□□□□ 0.66
LSM1-204ENST00000522515 UBAC1Q9BSL1 405 aa19.15■□□□□ 0.66
LSM1-204ENST00000522515 GPHNQ9NQX3 736 aaPredicted RBP19.15■□□□□ 0.66
LSM1-204ENST00000522515 GINM1Q9NU53 330 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms