RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 NCOA7Q8NI08 942 aa28.58■■■□□ 2.17
PVT1-212ENST00000521951 ANGEL1Q9UNK9 670 aaKnown RBP28.58■■■□□ 2.17
PVT1-212ENST00000521951 FAM47AQ5JRC9 791 aa28.57■■■□□ 2.16
PVT1-212ENST00000521951 CCDC17Q96LX7 622 aa28.57■■■□□ 2.16
PVT1-212ENST00000521951 TBC1D32Q96NH3 1257 aa28.57■■■□□ 2.16
PVT1-212ENST00000521951 WRNIP1Q96S55 665 aa28.57■■■□□ 2.16
PVT1-212ENST00000521951 GDF11O95390 407 aa28.56■■■□□ 2.16
PVT1-212ENST00000521951 AKR1B1P15121 316 aa28.56■■■□□ 2.16
PVT1-212ENST00000521951 INPP5BP32019 993 aa28.56■■■□□ 2.16
PVT1-212ENST00000521951 CAP2P40123 477 aa28.56■■■□□ 2.16
PVT1-212ENST00000521951 IREB2P48200 963 aaKnown RBP28.56■■■□□ 2.16
PVT1-212ENST00000521951 MAP3K11Q16584 847 aa28.56■■■□□ 2.16
PVT1-212ENST00000521951 ARMC9Q7Z3E5 817 aa28.56■■■□□ 2.16
PVT1-212ENST00000521951 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.56■■■□□ 2.16
PVT1-212ENST00000521951 ESR2Q92731 530 aa28.56■■■□□ 2.16
PVT1-212ENST00000521951 IL17RAQ96F46 866 aa28.56■■■□□ 2.16
PVT1-212ENST00000521951 NEK1Q96PY6 1258 aa28.56■■■□□ 2.16
PVT1-212ENST00000521951 GBA2Q9HCG7 927 aaPredicted RBP28.56■■■□□ 2.16
PVT1-212ENST00000521951 KDM4AO75164 1064 aa28.55■■■□□ 2.16
PVT1-212ENST00000521951 JAG1P78504 1218 aa28.55■■■□□ 2.16
PVT1-212ENST00000521951 TFAP4Q01664 338 aa28.55■■■□□ 2.16
PVT1-212ENST00000521951 COL9A3Q14050 684 aaPredicted RBP28.55■■■□□ 2.16
PVT1-212ENST00000521951 SHROOM1Q2M3G4 852 aaPredicted RBP28.55■■■□□ 2.16
PVT1-212ENST00000521951 RALYLQ86SE5 291 aaKnown RBP28.55■■■□□ 2.16
PVT1-212ENST00000521951 JAKMIP1Q96N16 626 aaKnown RBP28.55■■■□□ 2.16
PVT1-212ENST00000521951 PAPPA2Q9BXP8 1791 aa28.54■■■□□ 2.16
PVT1-212ENST00000521951 CTNND1O60716 968 aaKnown RBP28.54■■■□□ 2.16
PVT1-212ENST00000521951 MAP3K9P80192 1104 aa28.54■■■□□ 2.16
PVT1-212ENST00000521951 ABCB5Q2M3G0 1257 aa28.54■■■□□ 2.16
PVT1-212ENST00000521951 ZSWIM5Q9P217 1185 aa28.54■■■□□ 2.16
PVT1-212ENST00000521951 FKBP1BP68106 108 aa28.53■■■□□ 2.16
PVT1-212ENST00000521951 MB21D2Q8IYB1 491 aaPredicted RBP28.53■■■□□ 2.16
PVT1-212ENST00000521951 C2orf69Q8N8R5 385 aa28.53■■■□□ 2.16
PVT1-212ENST00000521951 ZKSCAN4Q969J2 545 aaPredicted RBP28.53■■■□□ 2.16
PVT1-212ENST00000521951 ATAD5Q96QE3 1844 aa28.53■■■□□ 2.16
PVT1-212ENST00000521951 TSPY2A6NKD2 308 aa28.53■■■□□ 2.16
PVT1-212ENST00000521951 UBE2Q2LH0YL09 131 aa28.53■■■□□ 2.16
PVT1-212ENST00000521951 MPHOSPH10O00566 681 aaKnown RBP28.53■■■□□ 2.16
PVT1-212ENST00000521951 TSPY3P0CV98 308 aa28.53■■■□□ 2.16
PVT1-212ENST00000521951 TSPY8P0CW00 308 aa28.53■■■□□ 2.16
PVT1-212ENST00000521951 NT5C2P49902 561 aa28.53■■■□□ 2.16
PVT1-212ENST00000521951 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.53■■■□□ 2.16
PVT1-212ENST00000521951 CYB5R4Q7L1T6 521 aa28.53■■■□□ 2.16
PVT1-212ENST00000521951 NEDD1Q8NHV4 660 aa28.53■■■□□ 2.16
PVT1-212ENST00000521951 OTOFQ9HC10 1997 aa28.53■■■□□ 2.16
PVT1-212ENST00000521951 GH2P01242 217 aa28.52■■■□□ 2.16
PVT1-212ENST00000521951 PSMA5P28066 241 aa28.52■■■□□ 2.16
PVT1-212ENST00000521951 KIF2CQ99661 725 aa28.52■■■□□ 2.16
PVT1-212ENST00000521951 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.52■■■□□ 2.16
PVT1-212ENST00000521951 TM6SF1Q9BZW5 370 aa28.52■■■□□ 2.16
PVT1-212ENST00000521951 CABP5Q9NP86 173 aa28.52■■■□□ 2.16
PVT1-212ENST00000521951 LDLRAD1Q5T700 205 aa28.51■■■□□ 2.15
PVT1-212ENST00000521951 ZBTB21Q9ULJ3 1066 aa28.51■■■□□ 2.15
PVT1-212ENST00000521951 GREB1LQ9C091 1923 aaPredicted RBP28.51■■■□□ 2.15
PVT1-212ENST00000521951 DOCK1Q14185 1865 aa28.51■■■□□ 2.15
PVT1-212ENST00000521951 CPA1P15085 419 aa28.5■■■□□ 2.15
PVT1-212ENST00000521951 CASTP20810 708 aaKnown RBP28.5■■■□□ 2.15
PVT1-212ENST00000521951 GUCY1A2P33402 732 aa28.5■■■□□ 2.15
PVT1-212ENST00000521951 NOL9Q5SY16 702 aaKnown RBP28.5■■■□□ 2.15
PVT1-212ENST00000521951 ANKRD13AQ8IZ07 590 aa28.5■■■□□ 2.15
PVT1-212ENST00000521951 SCYL3Q8IZE3 742 aa28.5■■■□□ 2.15
PVT1-212ENST00000521951 ZSWIM6Q9HCJ5 1215 aa28.5■■■□□ 2.15
PVT1-212ENST00000521951 HMGB1P09429 215 aaKnown RBP28.49■■■□□ 2.15
PVT1-212ENST00000521951 MCM5P33992 734 aa28.49■■■□□ 2.15
PVT1-212ENST00000521951 ANTXR2P58335 489 aa28.49■■■□□ 2.15
PVT1-212ENST00000521951 BLOC1S2Q6QNY1 142 aa28.49■■■□□ 2.15
PVT1-212ENST00000521951 TMEM179Q6ZVK1 233 aa28.49■■■□□ 2.15
PVT1-212ENST00000521951 CHST3Q7LGC8 479 aa28.49■■■□□ 2.15
PVT1-212ENST00000521951 GINM1Q9NU53 330 aa28.49■■■□□ 2.15
PVT1-212ENST00000521951 PLIN4Q96Q06 1357 aa28.49■■■□□ 2.15
PVT1-212ENST00000521951 ASNSP08243 561 aa28.48■■■□□ 2.15
PVT1-212ENST00000521951 VGLL4Q14135 290 aa28.48■■■□□ 2.15
PVT1-212ENST00000521951 SEPT2Q15019 361 aa28.48■■■□□ 2.15
PVT1-212ENST00000521951 DHX32Q7L7V1 743 aaKnown RBP28.48■■■□□ 2.15
PVT1-212ENST00000521951 ZKSCAN3Q9BRR0 538 aa28.48■■■□□ 2.15
PVT1-212ENST00000521951 IL17RBQ9NRM6 502 aa28.48■■■□□ 2.15
PVT1-212ENST00000521951 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.48■■■□□ 2.15
PVT1-212ENST00000521951 CSADQ9Y600 493 aa28.48■■■□□ 2.15
PVT1-212ENST00000521951 IGKV6D-41A0A0C4DH26 115 aa28.48■■■□□ 2.15
PVT1-212ENST00000521951 NMT2O60551 498 aa28.48■■■□□ 2.15
PVT1-212ENST00000521951 EXOSC10Q01780 885 aaKnown RBP28.48■■■□□ 2.15
PVT1-212ENST00000521951 CLMNQ96JQ2 1002 aa28.48■■■□□ 2.15
PVT1-212ENST00000521951 TCP11L1Q9NUJ3 509 aa28.48■■■□□ 2.15
PVT1-212ENST00000521951 SNCAIPQ9Y6H5 919 aa28.48■■■□□ 2.15
PVT1-212ENST00000521951 PRC1O43663 620 aa28.47■■■□□ 2.15
PVT1-212ENST00000521951 RAB3GAP1Q15042 981 aa28.47■■■□□ 2.15
PVT1-212ENST00000521951 RUFY3Q7L099 469 aa28.47■■■□□ 2.15
PVT1-212ENST00000521951 UPF3BQ9BZI7 483 aaKnown RBP28.47■■■□□ 2.15
PVT1-212ENST00000521951 CYP46A1Q9Y6A2 500 aa28.47■■■□□ 2.15
PVT1-212ENST00000521951 UNCXA6NJT0 531 aa28.46■■■□□ 2.15
PVT1-212ENST00000521951 RPS6KB1P23443 525 aa28.46■■■□□ 2.15
PVT1-212ENST00000521951 IQCA1Q86XH1 822 aa28.46■■■□□ 2.15
PVT1-212ENST00000521951 PICK1Q9NRD5 415 aa28.46■■■□□ 2.15
PVT1-212ENST00000521951 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.46■■■□□ 2.15
PVT1-212ENST00000521951 CCDC84Q86UT8 332 aaPredicted RBP28.45■■■□□ 2.15
PVT1-212ENST00000521951 CLEC10AQ8IUN9 316 aa28.45■■■□□ 2.15
PVT1-212ENST00000521951 CEP95Q96GE4 821 aa28.45■■■□□ 2.15
PVT1-212ENST00000521951 TCEANC2Q96MN5 208 aa28.45■■■□□ 2.15
PVT1-212ENST00000521951 ZSCAN10Q96SZ4 725 aaPredicted RBP28.45■■■□□ 2.15
PVT1-212ENST00000521951 KANSL2Q9H9L4 492 aa28.45■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms