RNA–Protein interactions for RNA: ENST00000521865.5

PABPC1-218, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-218ENST00000521865 PTPRFP10586 1907 aa25.43■■□□□ 1.66
PABPC1-218ENST00000521865 MAST2Q6P0Q8 1798 aa25.42■■□□□ 1.66
PABPC1-218ENST00000521865 USP17L10C9JJH3 530 aa25.42■■□□□ 1.66
PABPC1-218ENST00000521865 SHROOM1Q2M3G4 852 aaPredicted RBP25.42■■□□□ 1.66
PABPC1-218ENST00000521865 ERC1Q8IUD2 1116 aa25.42■■□□□ 1.66
PABPC1-218ENST00000521865 MAGEB6Q8N7X4 407 aa25.42■■□□□ 1.66
PABPC1-218ENST00000521865 GINM1Q9NU53 330 aa25.42■■□□□ 1.66
PABPC1-218ENST00000521865 EXOC6BQ9Y2D4 811 aa25.42■■□□□ 1.66
PABPC1-218ENST00000521865 NDUFB9Q9Y6M9 179 aa25.42■■□□□ 1.66
PABPC1-218ENST00000521865 MGAMO43451 1857 aa25.41■■□□□ 1.66
PABPC1-218ENST00000521865 C19orf81C9J6K1 198 aa25.41■■□□□ 1.66
PABPC1-218ENST00000521865 AACSQ86V21 672 aa25.41■■□□□ 1.66
PABPC1-218ENST00000521865 METTL16Q86W50 562 aaKnown RBP25.41■■□□□ 1.66
PABPC1-218ENST00000521865 CERS3Q8IU89 383 aa25.41■■□□□ 1.66
PABPC1-218ENST00000521865 MAP3K12Q12852 859 aa25.4■■□□□ 1.66
PABPC1-218ENST00000521865 P2RX7Q99572 595 aaKnown RBP25.4■■□□□ 1.66
PABPC1-218ENST00000521865 PAK6Q9NQU5 681 aaPredicted RBP25.4■■□□□ 1.66
PABPC1-218ENST00000521865 HMGCRP04035 888 aa25.39■■□□□ 1.66
PABPC1-218ENST00000521865 CAPN2P17655 700 aa25.39■■□□□ 1.66
PABPC1-218ENST00000521865 HOXA7P31268 230 aaPredicted RBP25.39■■□□□ 1.66
PABPC1-218ENST00000521865 CCAR1Q8IX12 1150 aaKnown RBP25.39■■□□□ 1.66
PABPC1-218ENST00000521865 PANK1Q8TE04 598 aa25.39■■□□□ 1.66
PABPC1-218ENST00000521865 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.39■■□□□ 1.662e-7■■■□□ 16.8
PABPC1-218ENST00000521865 ANTXR1Q9H6X2 564 aa25.39■■□□□ 1.66
PABPC1-218ENST00000521865 MORF4L1Q9UBU8 362 aa25.39■■□□□ 1.66
PABPC1-218ENST00000521865 LOC285556D6RIA3 1793 aa25.39■■□□□ 1.65
PABPC1-218ENST00000521865 GH2P01242 217 aa25.38■■□□□ 1.65
PABPC1-218ENST00000521865 HERVK_113P62684 666 aa25.38■■□□□ 1.65
PABPC1-218ENST00000521865 GPRC5AQ8NFJ5 357 aa25.38■■□□□ 1.65
PABPC1-218ENST00000521865 EVI5O60447 810 aa25.37■■□□□ 1.65
PABPC1-218ENST00000521865 PEX10O60683 326 aa25.37■■□□□ 1.65
PABPC1-218ENST00000521865 HSP90AB4PQ58FF6 505 aa25.37■■□□□ 1.65
PABPC1-218ENST00000521865 DIEXFQ68CQ4 756 aaKnown RBP25.37■■□□□ 1.65
PABPC1-218ENST00000521865 FEZ1Q99689 392 aa25.37■■□□□ 1.65
PABPC1-218ENST00000521865 BCL11AQ9H165 835 aa25.37■■□□□ 1.65
PABPC1-218ENST00000521865 IL1RAPL2Q9NP60 686 aa25.37■■□□□ 1.65
PABPC1-218ENST00000521865 GJD2Q9UKL4 321 aa25.37■■□□□ 1.65
PABPC1-218ENST00000521865 ATAD5Q96QE3 1844 aa25.37■■□□□ 1.65
PABPC1-218ENST00000521865 CYP2B6P20813 491 aa25.36■■□□□ 1.65
PABPC1-218ENST00000521865 ZYXQ15942 572 aaKnown RBP25.36■■□□□ 1.65
PABPC1-218ENST00000521865 USP17L2Q6R6M4 530 aa25.36■■□□□ 1.65
PABPC1-218ENST00000521865 PAGR1Q9BTK6 254 aa25.36■■□□□ 1.65
PABPC1-218ENST00000521865 HMX1Q9NP08 348 aaPredicted RBP25.36■■□□□ 1.65
PABPC1-218ENST00000521865 APBB1O00213 710 aa25.35■■□□□ 1.65
PABPC1-218ENST00000521865 PDE3AQ14432 1141 aa25.35■■□□□ 1.65
PABPC1-218ENST00000521865 TTC6Q86TZ1 520 aa25.35■■□□□ 1.65
PABPC1-218ENST00000521865 PAWRQ96IZ0 340 aaKnown RBP25.35■■□□□ 1.65
PABPC1-218ENST00000521865 CRISPLD2Q9H0B8 497 aa25.35■■□□□ 1.65
PABPC1-218ENST00000521865 CWC22Q9HCG8 908 aaKnown RBP25.35■■□□□ 1.65
PABPC1-218ENST00000521865 RBM27Q9P2N5 1060 aaKnown RBP25.35■■□□□ 1.65
PABPC1-218ENST00000521865 SERPINB13Q9UIV8 391 aa25.35■■□□□ 1.65
PABPC1-218ENST00000521865 TRIM32Q13049 653 aa25.34■■□□□ 1.65
PABPC1-218ENST00000521865 RAB3GAP1Q15042 981 aa25.34■■□□□ 1.65
PABPC1-218ENST00000521865 NECAB2Q7Z6G3 386 aa25.34■■□□□ 1.65
PABPC1-218ENST00000521865 NUDT12Q9BQG2 462 aa25.34■■□□□ 1.65
PABPC1-218ENST00000521865 TXNRD2Q9NNW7 524 aa25.34■■□□□ 1.65
PABPC1-218ENST00000521865 EMILIN3Q9NT22 766 aa25.34■■□□□ 1.65
PABPC1-218ENST00000521865 SIPA1L1O43166 1804 aa25.34■■□□□ 1.65
PABPC1-218ENST00000521865 ZBED9Q6R2W3 1325 aa25.34■■□□□ 1.65
PABPC1-218ENST00000521865 RPTORQ8N122 1335 aa25.34■■□□□ 1.65
PABPC1-218ENST00000521865 MS4A1P11836 297 aa25.33■■□□□ 1.65
PABPC1-218ENST00000521865 MAPK4P31152 587 aa25.33■■□□□ 1.65
PABPC1-218ENST00000521865 CERKLQ49MI3 558 aaPredicted RBP25.33■■□□□ 1.65
PABPC1-218ENST00000521865 TMED8Q6PL24 325 aaPredicted RBP25.33■■□□□ 1.65
PABPC1-218ENST00000521865 RHPN1Q8TCX5 695 aa25.33■■□□□ 1.65
PABPC1-218ENST00000521865 GTF3C2Q8WUA4 911 aaPredicted RBP25.33■■□□□ 1.65
PABPC1-218ENST00000521865 SOCS4Q8WXH5 440 aa25.33■■□□□ 1.65
PABPC1-218ENST00000521865 EHD4Q9H223 541 aa25.33■■□□□ 1.65
PABPC1-218ENST00000521865 RBPJLQ9UBG7 517 aa25.33■■□□□ 1.65
PABPC1-218ENST00000521865 CEP290O15078 2479 aa25.32■■□□□ 1.64
PABPC1-218ENST00000521865 MAGEB6P1A0A0J9YX57 407 aa25.32■■□□□ 1.64
PABPC1-218ENST00000521865 ERVK-9P63128 1117 aa25.32■■□□□ 1.64
PABPC1-218ENST00000521865 ERVK-24P63145 666 aa25.32■■□□□ 1.64
PABPC1-218ENST00000521865 TTF1Q15361 905 aaPredicted RBP25.32■■□□□ 1.64
PABPC1-218ENST00000521865 TATDN1Q6P1N9 297 aa25.32■■□□□ 1.64
PABPC1-218ENST00000521865 CLASRPQ8N2M8 674 aaKnown RBP25.32■■□□□ 1.64
PABPC1-218ENST00000521865 TRIB2Q92519 343 aa25.32■■□□□ 1.64
PABPC1-218ENST00000521865 CABP5Q9NP86 173 aa25.32■■□□□ 1.64
PABPC1-218ENST00000521865 POLR3DP05423 398 aaPredicted RBP25.31■■□□□ 1.64
PABPC1-218ENST00000521865 ABCB5Q2M3G0 1257 aa25.31■■□□□ 1.64
PABPC1-218ENST00000521865 DIS3LQ8TF46 1054 aaKnown RBP25.31■■□□□ 1.64
PABPC1-218ENST00000521865 USP14P54578 494 aa25.3■■□□□ 1.64
PABPC1-218ENST00000521865 Q3C1V9 767 aa25.3■■□□□ 1.64
PABPC1-218ENST00000521865 SLC9C2Q5TAH2 1124 aa25.3■■□□□ 1.64
PABPC1-218ENST00000521865 ANKLE1Q8NAG6 615 aa25.3■■□□□ 1.64
PABPC1-218ENST00000521865 DNAJC2Q99543 621 aaKnown RBP25.3■■□□□ 1.64
PABPC1-218ENST00000521865 USP17L15C9J2P7 530 aa25.29■■□□□ 1.64
PABPC1-218ENST00000521865 USP17L13C9JLJ4 530 aa25.29■■□□□ 1.64
PABPC1-218ENST00000521865 USP17L11C9JVI0 530 aa25.29■■□□□ 1.64
PABPC1-218ENST00000521865 USP17L18D6R9N7 530 aa25.29■■□□□ 1.64
PABPC1-218ENST00000521865 USP17L22D6RA61 530 aa25.29■■□□□ 1.64
PABPC1-218ENST00000521865 USP17L17D6RBQ6 530 aa25.29■■□□□ 1.64
PABPC1-218ENST00000521865 USP17L19D6RCP7 530 aa25.29■■□□□ 1.64
PABPC1-218ENST00000521865 USP17L20D6RJB6 530 aa25.29■■□□□ 1.64
PABPC1-218ENST00000521865 HMMRO75330 724 aa25.29■■□□□ 1.64
PABPC1-218ENST00000521865 IFIT2P09913 472 aaKnown RBP25.29■■□□□ 1.64
PABPC1-218ENST00000521865 PRKAR2AP13861 404 aaKnown RBP25.29■■□□□ 1.64
PABPC1-218ENST00000521865 ZKSCAN1P17029 563 aaPredicted RBP25.29■■□□□ 1.64
PABPC1-218ENST00000521865 USP17L24Q0WX57 530 aa25.29■■□□□ 1.64
PABPC1-218ENST00000521865 GPR142Q7Z601 462 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms