RNA–Protein interactions for RNA: ENST00000520940.1

EXTL3-208, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 4

Gene EXTL3, Length 542 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-208ENST00000520940 MTMR2Q13614 643 aa12.77□□□□□ -0.37
EXTL3-208ENST00000520940 SHROOM1Q2M3G4 852 aaPredicted RBP12.77□□□□□ -0.37
EXTL3-208ENST00000520940 SH3D19Q5HYK7 790 aa12.77□□□□□ -0.37
EXTL3-208ENST00000520940 FOXP4Q8IVH2 680 aaPredicted RBP12.77□□□□□ -0.37
EXTL3-208ENST00000520940 DNAJC2Q99543 621 aaKnown RBP12.77□□□□□ -0.37
EXTL3-208ENST00000520940 WDR18Q9BV38 432 aa12.77□□□□□ -0.37
EXTL3-208ENST00000520940 BCL11AQ9H165 835 aa12.77□□□□□ -0.37
EXTL3-208ENST00000520940 GINM1Q9NU53 330 aa12.77□□□□□ -0.37
EXTL3-208ENST00000520940 ZBTB21Q9ULJ3 1066 aa12.77□□□□□ -0.37
EXTL3-208ENST00000520940 PLXNB2O15031 1838 aa12.76□□□□□ -0.37
EXTL3-208ENST00000520940 GOLIM4O00461 696 aa12.76□□□□□ -0.37
EXTL3-208ENST00000520940 GRK4P32298 578 aa12.76□□□□□ -0.37
EXTL3-208ENST00000520940 BACE1P56817 501 aa12.76□□□□□ -0.37
EXTL3-208ENST00000520940 PABPC4Q13310 644 aaKnown RBP eCLIP12.76□□□□□ -0.37
EXTL3-208ENST00000520940 FAM110CQ1W6H9 321 aa12.76□□□□□ -0.37
EXTL3-208ENST00000520940 ANKRD13CQ8N6S4 541 aa12.76□□□□□ -0.37
EXTL3-208ENST00000520940 RIOK1Q9BRS2 568 aaKnown RBP12.76□□□□□ -0.37
EXTL3-208ENST00000520940 MAGEB6P1A0A0J9YX57 407 aa12.75□□□□□ -0.37
EXTL3-208ENST00000520940 SLC9C2Q5TAH2 1124 aa12.75□□□□□ -0.37
EXTL3-208ENST00000520940 SLAIN1Q8ND83 568 aa12.75□□□□□ -0.37
EXTL3-208ENST00000520940 ASCC2Q9H1I8 757 aaPredicted RBP12.75□□□□□ -0.37
EXTL3-208ENST00000520940 EHD4Q9H223 541 aa12.75□□□□□ -0.37
EXTL3-208ENST00000520940 TMOD4Q9NZQ9 345 aa12.75□□□□□ -0.37
EXTL3-208ENST00000520940 SERPINB13Q9UIV8 391 aa12.75□□□□□ -0.37
EXTL3-208ENST00000520940 GABRQQ9UN88 632 aa12.75□□□□□ -0.37
EXTL3-208ENST00000520940 ZNF532Q9HCE3 1301 aa12.74□□□□□ -0.37
EXTL3-208ENST00000520940 TCRBV5S4A2TA0A5A2 114 aa12.74□□□□□ -0.37
EXTL3-208ENST00000520940 USP17L10C9JJH3 530 aa12.74□□□□□ -0.37
EXTL3-208ENST00000520940 TNPO2O14787 897 aaKnown RBP12.74□□□□□ -0.37
EXTL3-208ENST00000520940 GH2P01242 217 aa12.74□□□□□ -0.37
EXTL3-208ENST00000520940 GCLCP48506 637 aaPredicted RBP12.74□□□□□ -0.37
EXTL3-208ENST00000520940 MTFR1Q15390 333 aa12.74□□□□□ -0.37
EXTL3-208ENST00000520940 TTC6Q86TZ1 520 aa12.74□□□□□ -0.37
EXTL3-208ENST00000520940 EDC3Q96F86 508 aaKnown RBP12.74□□□□□ -0.37
EXTL3-208ENST00000520940 CRNKL1Q9BZJ0 848 aaKnown RBP12.74□□□□□ -0.37
EXTL3-208ENST00000520940 PAG1Q9NWQ8 432 aa12.74□□□□□ -0.37
EXTL3-208ENST00000520940 C19orf81C9J6K1 198 aa12.73□□□□□ -0.37
EXTL3-208ENST00000520940 ATP5JP18859 108 aa12.73□□□□□ -0.37
EXTL3-208ENST00000520940 FLT3LGP49771 235 aa12.73□□□□□ -0.37
EXTL3-208ENST00000520940 IRX3P78415 501 aaPredicted RBP12.73□□□□□ -0.37
EXTL3-208ENST00000520940 TATDN1Q6P1N9 297 aa12.73□□□□□ -0.37
EXTL3-208ENST00000520940 COA7Q96BR5 231 aa12.73□□□□□ -0.37
EXTL3-208ENST00000520940 LRRCC1Q9C099 1032 aa12.73□□□□□ -0.37
EXTL3-208ENST00000520940 BOLA2Q9H3K6 86 aa12.73□□□□□ -0.37
EXTL3-208ENST00000520940 BIN2Q9UBW5 565 aaPredicted RBP12.73□□□□□ -0.37
EXTL3-208ENST00000520940 ADCY3O60266 1144 aa12.72□□□□□ -0.37
EXTL3-208ENST00000520940 CCL5P13501 91 aa12.72□□□□□ -0.37
EXTL3-208ENST00000520940 ELNP15502 786 aa12.72□□□□□ -0.37
EXTL3-208ENST00000520940 HOXA7P31268 230 aaPredicted RBP12.72□□□□□ -0.37
EXTL3-208ENST00000520940 SHMT1P34896 483 aa12.72□□□□□ -0.37
EXTL3-208ENST00000520940 PLCD1P51178 756 aa12.72□□□□□ -0.37
EXTL3-208ENST00000520940 UBXN2AP68543 259 aa12.72□□□□□ -0.37
EXTL3-208ENST00000520940 IRF5Q13568 498 aa12.72□□□□□ -0.37
EXTL3-208ENST00000520940 CERKLQ49MI3 558 aaPredicted RBP12.72□□□□□ -0.37
EXTL3-208ENST00000520940 LCORLQ8N3X6 602 aa12.72□□□□□ -0.37
EXTL3-208ENST00000520940 SHISA4Q96DD7 197 aa12.72□□□□□ -0.37
EXTL3-208ENST00000520940 HAUS7Q99871 368 aa12.72□□□□□ -0.37
EXTL3-208ENST00000520940 SMARCA5O60264 1052 aaPredicted RBP12.71□□□□□ -0.37
EXTL3-208ENST00000520940 POLR3DP05423 398 aaPredicted RBP12.71□□□□□ -0.37
EXTL3-208ENST00000520940 ADD2P35612 726 aa12.71□□□□□ -0.37
EXTL3-208ENST00000520940 HERVK_113P62684 666 aa12.71□□□□□ -0.37
EXTL3-208ENST00000520940 GABPAQ06546 454 aa12.71□□□□□ -0.37
EXTL3-208ENST00000520940 RAB3GAP1Q15042 981 aa12.71□□□□□ -0.37
EXTL3-208ENST00000520940 ABCB5Q2M3G0 1257 aa12.71□□□□□ -0.37
EXTL3-208ENST00000520940 USP17L2Q6R6M4 530 aa12.71□□□□□ -0.37
EXTL3-208ENST00000520940 PXYLP1Q8TE99 480 aa12.71□□□□□ -0.37
EXTL3-208ENST00000520940 SDR42E1Q8WUS8 393 aa12.71□□□□□ -0.37
EXTL3-208ENST00000520940 FEZ1Q99689 392 aa12.71□□□□□ -0.37
EXTL3-208ENST00000520940 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.71□□□□□ -0.37
EXTL3-208ENST00000520940 RNF208Q9H0X6 261 aa12.71□□□□□ -0.37
EXTL3-208ENST00000520940 DCP1AQ9NPI6 582 aaPredicted RBP12.71□□□□□ -0.37
EXTL3-208ENST00000520940 MCM9Q9NXL9 1143 aa12.71□□□□□ -0.37
EXTL3-208ENST00000520940 MORF4L1Q9UBU8 362 aa12.71□□□□□ -0.37
EXTL3-208ENST00000520940 PARP14Q460N5 1801 aa12.7□□□□□ -0.38
EXTL3-208ENST00000520940 MBD4O95243 580 aa12.7□□□□□ -0.38
EXTL3-208ENST00000520940 SLC34A2O95436 690 aa12.7□□□□□ -0.38
EXTL3-208ENST00000520940 INHAP05111 366 aa12.7□□□□□ -0.38
EXTL3-208ENST00000520940 GJB1P08034 283 aa12.7□□□□□ -0.38
EXTL3-208ENST00000520940 EVX2Q03828 476 aa12.7□□□□□ -0.38
EXTL3-208ENST00000520940 SLFNL1Q499Z3 407 aa12.7□□□□□ -0.38
EXTL3-208ENST00000520940 NKX2-3Q8TAU0 364 aa12.7□□□□□ -0.38
EXTL3-208ENST00000520940 C12orf42Q96LP6 360 aa12.7□□□□□ -0.38
EXTL3-208ENST00000520940 P2RX7Q99572 595 aaKnown RBP12.7□□□□□ -0.38
EXTL3-208ENST00000520940 UNC93B1Q9H1C4 597 aa12.7□□□□□ -0.38
EXTL3-208ENST00000520940 ARMT1Q9H993 441 aa12.7□□□□□ -0.38
EXTL3-208ENST00000520940 CABP5Q9NP86 173 aa12.7□□□□□ -0.38
EXTL3-208ENST00000520940 EMILIN3Q9NT22 766 aa12.7□□□□□ -0.38
EXTL3-208ENST00000520940 TAOK2Q9UL54 1235 aa12.7□□□□□ -0.38
EXTL3-208ENST00000520940 RLFQ13129 1914 aa12.7□□□□□ -0.38
EXTL3-208ENST00000520940 A0A0G2JMZ2 1700 aa12.69□□□□□ -0.38
EXTL3-208ENST00000520940 CHGBP05060 677 aa12.69□□□□□ -0.38
EXTL3-208ENST00000520940 CYP2D6P10635 497 aa12.69□□□□□ -0.38
EXTL3-208ENST00000520940 GUCY1A2P33402 732 aa12.69□□□□□ -0.38
EXTL3-208ENST00000520940 GJA8P48165 433 aa12.69□□□□□ -0.38
EXTL3-208ENST00000520940 ZYXQ15942 572 aaKnown RBP12.69□□□□□ -0.38
EXTL3-208ENST00000520940 GTF3C2Q8WUA4 911 aaPredicted RBP12.69□□□□□ -0.38
EXTL3-208ENST00000520940 TXNRD2Q9NNW7 524 aa12.69□□□□□ -0.38
EXTL3-208ENST00000520940 TRIOBPQ9H2D6 2365 aa12.69□□□□□ -0.38
EXTL3-208ENST00000520940 ALPK3Q96L96 1907 aa12.68□□□□□ -0.38
EXTL3-208ENST00000520940 FRMPD3Q5JV73 1810 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms