RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 SLC10A4Q96EP9 437 aa20.66■□□□□ 0.9
TRAM1-203ENST00000520700 USP26Q9BXU7 913 aa20.66■□□□□ 0.9
TRAM1-203ENST00000520700 TBC1D2Q9BYX2 928 aa20.66■□□□□ 0.9
TRAM1-203ENST00000520700 ABT1Q9ULW3 272 aaKnown RBP20.66■□□□□ 0.9
TRAM1-203ENST00000520700 TACC3Q9Y6A5 838 aa20.66■□□□□ 0.9
TRAM1-203ENST00000520700 HAND2P61296 217 aa20.65■□□□□ 0.9
TRAM1-203ENST00000520700 DEFB115Q30KQ5 88 aa20.65■□□□□ 0.9
TRAM1-203ENST00000520700 MFSD6Q6ZSS7 791 aa20.65■□□□□ 0.9
TRAM1-203ENST00000520700 ERO1BQ86YB8 467 aa20.65■□□□□ 0.9
TRAM1-203ENST00000520700 ZNF444Q8N0Y2 327 aaPredicted RBP20.65■□□□□ 0.9
TRAM1-203ENST00000520700 CCDC102AQ96A19 550 aa20.65■□□□□ 0.9
TRAM1-203ENST00000520700 CLMNQ96JQ2 1002 aa20.65■□□□□ 0.9
TRAM1-203ENST00000520700 LAMB1P07942 1786 aa20.64■□□□□ 0.9
TRAM1-203ENST00000520700 SPDYE5A6NIY4 337 aa20.64■□□□□ 0.89
TRAM1-203ENST00000520700 PTPRAP18433 802 aa20.64■□□□□ 0.89
TRAM1-203ENST00000520700 HSPA4P34932 840 aa20.64■□□□□ 0.89
TRAM1-203ENST00000520700 JAG1P78504 1218 aa20.64■□□□□ 0.89
TRAM1-203ENST00000520700 PPATQ06203 517 aa20.64■□□□□ 0.89
TRAM1-203ENST00000520700 ABCB5Q2M3G0 1257 aa20.64■□□□□ 0.89
TRAM1-203ENST00000520700 RNF20Q5VTR2 975 aa20.64■□□□□ 0.89
TRAM1-203ENST00000520700 CREB3L3Q68CJ9 461 aa20.64■□□□□ 0.89
TRAM1-203ENST00000520700 TBC1D10CQ8IV04 446 aa20.64■□□□□ 0.89
TRAM1-203ENST00000520700 CABP5Q9NP86 173 aa20.64■□□□□ 0.89
TRAM1-203ENST00000520700 SLC27A2O14975 620 aa20.63■□□□□ 0.89
TRAM1-203ENST00000520700 TMEM179Q6ZVK1 233 aa20.63■□□□□ 0.89
TRAM1-203ENST00000520700 NEDD1Q8NHV4 660 aa20.63■□□□□ 0.89
TRAM1-203ENST00000520700 WDR18Q9BV38 432 aa20.63■□□□□ 0.89
TRAM1-203ENST00000520700 CNNM2Q9H8M5 875 aa20.63■□□□□ 0.89
TRAM1-203ENST00000520700 PICK1Q9NRD5 415 aa20.63■□□□□ 0.89
TRAM1-203ENST00000520700 ZBTB21Q9ULJ3 1066 aa20.63■□□□□ 0.89
TRAM1-203ENST00000520700 USP17L5A8MUK1 530 aa20.62■□□□□ 0.89
TRAM1-203ENST00000520700 GH2P01242 217 aa20.62■□□□□ 0.89
TRAM1-203ENST00000520700 ZBTB48P10074 688 aaPredicted RBP20.62■□□□□ 0.89
TRAM1-203ENST00000520700 AKR1B1P15121 316 aa20.62■□□□□ 0.89
TRAM1-203ENST00000520700 GUCY1A2P33402 732 aa20.62■□□□□ 0.89
TRAM1-203ENST00000520700 ZNF157P51786 506 aaPredicted RBP20.62■□□□□ 0.89
TRAM1-203ENST00000520700 KRT23Q9C075 422 aa20.62■□□□□ 0.89
TRAM1-203ENST00000520700 ELP3Q9H9T3 547 aa20.62■□□□□ 0.89
TRAM1-203ENST00000520700 PLIN4Q96Q06 1357 aa20.61■□□□□ 0.89
TRAM1-203ENST00000520700 IGKV6D-41A0A0C4DH26 115 aa20.61■□□□□ 0.89
TRAM1-203ENST00000520700 PRDM1O75626 825 aa20.61■□□□□ 0.89
TRAM1-203ENST00000520700 GDF11O95390 407 aa20.61■□□□□ 0.89
TRAM1-203ENST00000520700 SLC10A3P09131 477 aa20.61■□□□□ 0.89
TRAM1-203ENST00000520700 PPIL2Q13356 520 aa20.61■□□□□ 0.89
TRAM1-203ENST00000520700 SPRYD7Q5W111 196 aa20.61■□□□□ 0.89
TRAM1-203ENST00000520700 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.61■□□□□ 0.89
TRAM1-203ENST00000520700 INCENPQ9NQS7 918 aa20.61■□□□□ 0.89
TRAM1-203ENST00000520700 TCP11L1Q9NUJ3 509 aa20.61■□□□□ 0.89
TRAM1-203ENST00000520700 LAMA4Q16363 1823 aa20.6■□□□□ 0.89
TRAM1-203ENST00000520700 FAM155AB1AL88 458 aaPredicted RBP20.6■□□□□ 0.89
TRAM1-203ENST00000520700 E7EWF7 191 aa20.6■□□□□ 0.89
TRAM1-203ENST00000520700 CXCL11O14625 94 aa20.6■□□□□ 0.89
TRAM1-203ENST00000520700 ECE1P42892 770 aa20.6■□□□□ 0.89
TRAM1-203ENST00000520700 NOVP48745 357 aa20.6■□□□□ 0.89
TRAM1-203ENST00000520700 TFAP4Q01664 338 aa20.6■□□□□ 0.89
TRAM1-203ENST00000520700 RASAL3Q86YV0 1011 aa20.6■□□□□ 0.89
TRAM1-203ENST00000520700 STK11IPQ8N1F8 1099 aa20.6■□□□□ 0.89
TRAM1-203ENST00000520700 ESR2Q92731 530 aa20.6■□□□□ 0.89
TRAM1-203ENST00000520700 WNK4Q96J92 1243 aa20.6■□□□□ 0.89
TRAM1-203ENST00000520700 KANSL2Q9H9L4 492 aa20.6■□□□□ 0.89
TRAM1-203ENST00000520700 KCNH4Q9UQ05 1017 aa20.6■□□□□ 0.89
TRAM1-203ENST00000520700 AFG3L2Q9Y4W6 797 aa20.6■□□□□ 0.89
TRAM1-203ENST00000520700 SEC24BO95487 1268 aa20.59■□□□□ 0.89
TRAM1-203ENST00000520700 ZKSCAN1P17029 563 aaPredicted RBP20.59■□□□□ 0.89
TRAM1-203ENST00000520700 TRDNQ13061 729 aa20.59■□□□□ 0.89
TRAM1-203ENST00000520700 KRT32Q14532 448 aa20.59■□□□□ 0.89
TRAM1-203ENST00000520700 PPP4R3BQ5MIZ7 849 aa20.59■□□□□ 0.89
TRAM1-203ENST00000520700 OPTNQ96CV9 577 aa20.59■□□□□ 0.89
TRAM1-203ENST00000520700 AS3MTQ9HBK9 375 aa20.59■□□□□ 0.89
TRAM1-203ENST00000520700 TAF6LQ9Y6J9 622 aa20.59■□□□□ 0.89
TRAM1-203ENST00000520700 ZHX2Q9Y6X8 837 aa20.59■□□□□ 0.89
TRAM1-203ENST00000520700 OTOFQ9HC10 1997 aa20.59■□□□□ 0.89
TRAM1-203ENST00000520700 NEDD4P46934 1319 aa20.58■□□□□ 0.89
TRAM1-203ENST00000520700 TSPY3P0CV98 308 aa20.58■□□□□ 0.89
TRAM1-203ENST00000520700 TSPY8P0CW00 308 aa20.58■□□□□ 0.89
TRAM1-203ENST00000520700 GJA5P36382 358 aa20.58■□□□□ 0.89
TRAM1-203ENST00000520700 SEPT2Q15019 361 aa20.58■□□□□ 0.89
TRAM1-203ENST00000520700 SHROOM1Q2M3G4 852 aaPredicted RBP20.58■□□□□ 0.89
TRAM1-203ENST00000520700 STOX1Q6ZVD7 989 aa20.58■□□□□ 0.89
TRAM1-203ENST00000520700 NCOA7Q8NI08 942 aa20.58■□□□□ 0.89
TRAM1-203ENST00000520700 IL17RAQ96F46 866 aa20.58■□□□□ 0.89
TRAM1-203ENST00000520700 NYAP2Q9P242 653 aa20.58■□□□□ 0.89
TRAM1-203ENST00000520700 SYNPO2Q9UMS6 1093 aa20.58■□□□□ 0.89
TRAM1-203ENST00000520700 DOCK1Q14185 1865 aa20.58■□□□□ 0.88
TRAM1-203ENST00000520700 TSPY2A6NKD2 308 aa20.57■□□□□ 0.88
TRAM1-203ENST00000520700 MPHOSPH10O00566 681 aaKnown RBP20.57■□□□□ 0.88
TRAM1-203ENST00000520700 RANBP6O60518 1105 aaKnown RBP20.57■□□□□ 0.88
TRAM1-203ENST00000520700 MCCP23508 829 aa20.57■□□□□ 0.88
TRAM1-203ENST00000520700 NOGQ13253 232 aa20.57■□□□□ 0.88
TRAM1-203ENST00000520700 CCDC178Q5BJE1 867 aa20.57■□□□□ 0.88
TRAM1-203ENST00000520700 SIAH1Q8IUQ4 282 aa20.57■□□□□ 0.88
TRAM1-203ENST00000520700 REM2Q8IYK8 340 aaPredicted RBP20.57■□□□□ 0.88
TRAM1-203ENST00000520700 RASEFQ8IZ41 740 aa20.57■□□□□ 0.88
TRAM1-203ENST00000520700 ZNF280CQ8ND82 737 aa20.57■□□□□ 0.88
TRAM1-203ENST00000520700 MKL1Q969V6 931 aa20.57■□□□□ 0.88
TRAM1-203ENST00000520700 CAPNS2Q96L46 248 aa20.57■□□□□ 0.88
TRAM1-203ENST00000520700 MTA3Q9BTC8 594 aa20.57■□□□□ 0.88
TRAM1-203ENST00000520700 ZSWIM5Q9P217 1185 aa20.57■□□□□ 0.88
TRAM1-203ENST00000520700 TESPA1A2RU30 521 aaPredicted RBP20.56■□□□□ 0.88
TRAM1-203ENST00000520700 C19orf81C9J6K1 198 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms