RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 DCP1AQ9NPI6 582 aaPredicted RBP17.04■□□□□ 0.32
VEGFA-221ENST00000520265 TMOD4Q9NZQ9 345 aa17.04■□□□□ 0.32
VEGFA-221ENST00000520265 ZBTB21Q9ULJ3 1066 aa17.04■□□□□ 0.32
VEGFA-221ENST00000520265 RNF113AO15541 343 aaKnown RBP17.03■□□□□ 0.32
VEGFA-221ENST00000520265 TLR2O60603 784 aa17.03■□□□□ 0.32
VEGFA-221ENST00000520265 APPP05067 770 aa17.03■□□□□ 0.32
VEGFA-221ENST00000520265 CYP2C8P10632 490 aa17.03■□□□□ 0.32
VEGFA-221ENST00000520265 MTMR2Q13614 643 aa17.03■□□□□ 0.32
VEGFA-221ENST00000520265 ZYXQ15942 572 aaKnown RBP17.03■□□□□ 0.32
VEGFA-221ENST00000520265 ABCB5Q2M3G0 1257 aa17.03■□□□□ 0.32
VEGFA-221ENST00000520265 CERKLQ49MI3 558 aaPredicted RBP17.03■□□□□ 0.32
VEGFA-221ENST00000520265 PI4K2BQ8TCG2 481 aa17.03■□□□□ 0.32
VEGFA-221ENST00000520265 APPBP2Q92624 585 aa17.03■□□□□ 0.32
VEGFA-221ENST00000520265 TBC1D2Q9BYX2 928 aa17.03■□□□□ 0.32
VEGFA-221ENST00000520265 EFCC1Q9HA90 598 aa17.03■□□□□ 0.32
VEGFA-221ENST00000520265 CABP5Q9NP86 173 aa17.03■□□□□ 0.32
VEGFA-221ENST00000520265 TRIM6-TRIM34B2RNG4 842 aa17.02■□□□□ 0.32
VEGFA-221ENST00000520265 ZFYP08048 801 aaPredicted RBP17.02■□□□□ 0.32
VEGFA-221ENST00000520265 ARHGEF6Q15052 776 aa17.02■□□□□ 0.32
VEGFA-221ENST00000520265 PKN2Q16513 984 aaKnown RBP17.02■□□□□ 0.32
VEGFA-221ENST00000520265 STK11IPQ8N1F8 1099 aa17.02■□□□□ 0.32
VEGFA-221ENST00000520265 EHD4Q9H223 541 aa17.02■□□□□ 0.32
VEGFA-221ENST00000520265 ATP8A2Q9NTI2 1148 aa17.02■□□□□ 0.32
VEGFA-221ENST00000520265 PHIPQ8WWQ0 1821 aa17.01■□□□□ 0.31
VEGFA-221ENST00000520265 IGHDP01880 384 aa17.01■□□□□ 0.31
VEGFA-221ENST00000520265 TDO2P48775 406 aa17.01■□□□□ 0.31
VEGFA-221ENST00000520265 EVX2Q03828 476 aa17.01■□□□□ 0.31
VEGFA-221ENST00000520265 MOGSQ13724 837 aa17.01■□□□□ 0.31
VEGFA-221ENST00000520265 GPAT2Q6NUI2 795 aa17.01■□□□□ 0.31
VEGFA-221ENST00000520265 OTOP1Q7RTM1 612 aa17.01■□□□□ 0.31
VEGFA-221ENST00000520265 PNMA3Q9UL41 463 aa17.01■□□□□ 0.31
VEGFA-221ENST00000520265 AGTPBP1Q9UPW5 1226 aa17.01■□□□□ 0.31
VEGFA-221ENST00000520265 BAZ2AQ9UIF9 1905 aaKnown RBP17.01■□□□□ 0.31
VEGFA-221ENST00000520265 DDX60LQ5H9U9 1706 aaKnown RBP17.01■□□□□ 0.31
VEGFA-221ENST00000520265 CYP2D7A0A087X1C5 515 aa17■□□□□ 0.31
VEGFA-221ENST00000520265 USP17L12C9JPN9 530 aa17■□□□□ 0.31
VEGFA-221ENST00000520265 USP17L21D6R901 530 aa17■□□□□ 0.31
VEGFA-221ENST00000520265 M0R2C6 588 aa17■□□□□ 0.31
VEGFA-221ENST00000520265 GPAA1O43292 621 aa17■□□□□ 0.31
VEGFA-221ENST00000520265 PDE1AP54750 535 aa17■□□□□ 0.31
VEGFA-221ENST00000520265 JAG1P78504 1218 aa17■□□□□ 0.31
VEGFA-221ENST00000520265 PABPC4Q13310 644 aaKnown RBP eCLIP17■□□□□ 0.316e-13■■■■■ 112.3
VEGFA-221ENST00000520265 TREML2Q5T2D2 321 aa17■□□□□ 0.31
VEGFA-221ENST00000520265 FBXO46Q6PJ61 603 aaPredicted RBP17■□□□□ 0.31
VEGFA-221ENST00000520265 METTL16Q86W50 562 aaKnown RBP17■□□□□ 0.31
VEGFA-221ENST00000520265 CHD1LQ86WJ1 897 aa17■□□□□ 0.31
VEGFA-221ENST00000520265 SLC44A5Q8NCS7 719 aa17■□□□□ 0.31
VEGFA-221ENST00000520265 OSBP2Q969R2 916 aa17■□□□□ 0.31
VEGFA-221ENST00000520265 DYNLL2Q96FJ2 89 aa17■□□□□ 0.31
VEGFA-221ENST00000520265 HPS5Q9UPZ3 1129 aa17■□□□□ 0.31
VEGFA-221ENST00000520265 PTPRFP10586 1907 aa17■□□□□ 0.31
VEGFA-221ENST00000520265 MINDY4BA8MYZ0 360 aa16.99■□□□□ 0.31
VEGFA-221ENST00000520265 USP17L10C9JJH3 530 aa16.99■□□□□ 0.31
VEGFA-221ENST00000520265 FMNL1O95466 1100 aaPredicted RBP16.99■□□□□ 0.31
VEGFA-221ENST00000520265 OSBPP22059 807 aa16.99■□□□□ 0.31
VEGFA-221ENST00000520265 SHMT1P34896 483 aa16.99■□□□□ 0.31
VEGFA-221ENST00000520265 IRX3P78415 501 aaPredicted RBP16.99■□□□□ 0.31
VEGFA-221ENST00000520265 RILPL2Q969X0 211 aa16.99■□□□□ 0.31
VEGFA-221ENST00000520265 GINM1Q9NU53 330 aa16.99■□□□□ 0.31
VEGFA-221ENST00000520265 BACE1P56817 501 aa16.98■□□□□ 0.31
VEGFA-221ENST00000520265 LACTBP83111 547 aaPredicted RBP16.98■□□□□ 0.31
VEGFA-221ENST00000520265 TATDN1Q6P1N9 297 aa16.98■□□□□ 0.31
VEGFA-221ENST00000520265 SMC5Q8IY18 1101 aa16.98■□□□□ 0.31
VEGFA-221ENST00000520265 PROCA1Q8NCQ7 364 aaPredicted RBP16.98■□□□□ 0.31
VEGFA-221ENST00000520265 EVI5LQ96CN4 794 aa16.98■□□□□ 0.31
VEGFA-221ENST00000520265 STRBPQ96SI9 672 aaKnown RBP16.98■□□□□ 0.31
VEGFA-221ENST00000520265 ARHGAP39Q9C0H5 1083 aa16.98■□□□□ 0.31
VEGFA-221ENST00000520265 ARPP21Q9UBL0 812 aaPredicted RBP16.98■□□□□ 0.31
VEGFA-221ENST00000520265 SWAP70Q9UH65 585 aa16.98■□□□□ 0.31
VEGFA-221ENST00000520265 SOX10P56693 466 aa16.97■□□□□ 0.31
VEGFA-221ENST00000520265 ATP2B2Q01814 1243 aa16.97■□□□□ 0.31
VEGFA-221ENST00000520265 NUCB1Q02818 461 aa16.97■□□□□ 0.31
VEGFA-221ENST00000520265 SEC62Q99442 399 aaKnown RBP16.97■□□□□ 0.31
VEGFA-221ENST00000520265 WDR18Q9BV38 432 aa16.97■□□□□ 0.31
VEGFA-221ENST00000520265 MYH8P13535 1937 aa16.97■□□□□ 0.31
VEGFA-221ENST00000520265 SALL3Q9BXA9 1300 aa16.96■□□□□ 0.31
VEGFA-221ENST00000520265 C19orf81C9J6K1 198 aa16.96■□□□□ 0.31
VEGFA-221ENST00000520265 GNAT2P19087 354 aa16.96■□□□□ 0.31
VEGFA-221ENST00000520265 PSMC4P43686 418 aa16.96■□□□□ 0.31
VEGFA-221ENST00000520265 SEPT2Q15019 361 aa16.96■□□□□ 0.31
VEGFA-221ENST00000520265 CTR9Q6PD62 1173 aa16.96■□□□□ 0.31
VEGFA-221ENST00000520265 USP17L2Q6R6M4 530 aa16.96■□□□□ 0.31
VEGFA-221ENST00000520265 C17orf99Q6UX52 265 aa16.96■□□□□ 0.31
VEGFA-221ENST00000520265 ANKRD13CQ8N6S4 541 aa16.96■□□□□ 0.31
VEGFA-221ENST00000520265 NACAP1Q9BZK3 213 aa16.96■□□□□ 0.31
VEGFA-221ENST00000520265 STAP2Q9UGK3 403 aa16.96■□□□□ 0.31
VEGFA-221ENST00000520265 SLC45A1Q9Y2W3 748 aa16.96■□□□□ 0.31
VEGFA-221ENST00000520265 LOC285556D6RIA3 1793 aa16.96■□□□□ 0.31
VEGFA-221ENST00000520265 RAD21O60216 631 aa16.95■□□□□ 0.3
VEGFA-221ENST00000520265 MYCP01106 439 aaPredicted RBP16.95■□□□□ 0.3
VEGFA-221ENST00000520265 CDK8P49336 464 aa16.95■□□□□ 0.3
VEGFA-221ENST00000520265 FCGRTP55899 365 aa16.95■□□□□ 0.3
VEGFA-221ENST00000520265 GABPAQ06546 454 aa16.95■□□□□ 0.3
VEGFA-221ENST00000520265 C12orf60Q5U649 245 aa16.95■□□□□ 0.3
VEGFA-221ENST00000520265 CCDC129Q6ZRS4 1044 aa16.95■□□□□ 0.3
VEGFA-221ENST00000520265 ASCC2Q9H1I8 757 aaPredicted RBP16.95■□□□□ 0.3
VEGFA-221ENST00000520265 MKNK2Q9HBH9 465 aa16.95■□□□□ 0.3
VEGFA-221ENST00000520265 TAOK2Q9UL54 1235 aa16.95■□□□□ 0.3
VEGFA-221ENST00000520265 PTPN22Q9Y2R2 807 aa16.95■□□□□ 0.3
VEGFA-221ENST00000520265 ZSWIM8A7E2V4 1837 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms