RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 KLRG1Q96E93 195 aa6.69□□□□□ -1.34
CTNNA1-220ENST00000520260 CAPNS2Q96L46 248 aa6.69□□□□□ -1.34
CTNNA1-220ENST00000520260 TMEM39BQ9GZU3 492 aa6.69□□□□□ -1.34
CTNNA1-220ENST00000520260 MKNK2Q9HBH9 465 aa6.69□□□□□ -1.34
CTNNA1-220ENST00000520260 ZCCHC17Q9NP64 241 aaKnown RBP6.69□□□□□ -1.34
CTNNA1-220ENST00000520260 TMOD4Q9NZQ9 345 aa6.69□□□□□ -1.34
CTNNA1-220ENST00000520260 MYH2Q9UKX2 1941 aa6.68□□□□□ -1.34
CTNNA1-220ENST00000520260 SHTN1A0MZ66 631 aa6.68□□□□□ -1.34
CTNNA1-220ENST00000520260 FSD2A1L4K1 749 aa6.68□□□□□ -1.34
CTNNA1-220ENST00000520260 PATL2C9JE40 543 aaKnown RBP6.68□□□□□ -1.34
CTNNA1-220ENST00000520260 TRAF5O00463 557 aa6.68□□□□□ -1.34
CTNNA1-220ENST00000520260 GPAA1O43292 621 aa6.68□□□□□ -1.34
CTNNA1-220ENST00000520260 REC8O95072 547 aa6.68□□□□□ -1.34
CTNNA1-220ENST00000520260 EGFRP00533 1210 aa6.68□□□□□ -1.34
CTNNA1-220ENST00000520260 IGHDP01880 384 aa6.68□□□□□ -1.34
CTNNA1-220ENST00000520260 SART3Q15020 963 aaKnown RBP6.68□□□□□ -1.34
CTNNA1-220ENST00000520260 IMMTQ16891 758 aaKnown RBP6.68□□□□□ -1.34
CTNNA1-220ENST00000520260 NOL9Q5SY16 702 aaKnown RBP6.68□□□□□ -1.34
CTNNA1-220ENST00000520260 IFNLR1Q8IU57 520 aaPredicted RBP6.68□□□□□ -1.34
CTNNA1-220ENST00000520260 PLEKHM2Q8IWE5 1019 aa6.68□□□□□ -1.34
CTNNA1-220ENST00000520260 SCYL3Q8IZE3 742 aa6.68□□□□□ -1.34
CTNNA1-220ENST00000520260 ZNF444Q8N0Y2 327 aaPredicted RBP6.68□□□□□ -1.34
CTNNA1-220ENST00000520260 FEZ1Q99689 392 aa6.68□□□□□ -1.34
CTNNA1-220ENST00000520260 CNNM2Q9H8M5 875 aa6.68□□□□□ -1.34
CTNNA1-220ENST00000520260 ARHGEF10LQ9HCE6 1279 aa6.68□□□□□ -1.34
CTNNA1-220ENST00000520260 SAGE1Q9NXZ1 904 aa6.68□□□□□ -1.34
CTNNA1-220ENST00000520260 ZMYM6O95789 1325 aa6.68□□□□□ -1.34
CTNNA1-220ENST00000520260 WDR33Q9C0J8 1336 aaKnown RBP6.68□□□□□ -1.34
CTNNA1-220ENST00000520260 DOCK2Q92608 1830 aa6.67□□□□□ -1.34
CTNNA1-220ENST00000520260 ERICH2A1L162 156 aa6.67□□□□□ -1.34
CTNNA1-220ENST00000520260 C19orf81C9J6K1 198 aa6.67□□□□□ -1.34
CTNNA1-220ENST00000520260 MPHOSPH10O00566 681 aaKnown RBP6.67□□□□□ -1.34
CTNNA1-220ENST00000520260 CXCL11O14625 94 aa6.67□□□□□ -1.34
CTNNA1-220ENST00000520260 CDC45O75419 566 aa6.67□□□□□ -1.34
CTNNA1-220ENST00000520260 SLC10A3P09131 477 aa6.67□□□□□ -1.34
CTNNA1-220ENST00000520260 ZKSCAN1P17029 563 aaPredicted RBP6.67□□□□□ -1.34
CTNNA1-220ENST00000520260 CLCN1P35523 988 aa6.67□□□□□ -1.34
CTNNA1-220ENST00000520260 CACNB3P54284 484 aa6.67□□□□□ -1.34
CTNNA1-220ENST00000520260 RHBDL3P58872 404 aa6.67□□□□□ -1.34
CTNNA1-220ENST00000520260 PPIL2Q13356 520 aa6.67□□□□□ -1.34
CTNNA1-220ENST00000520260 PRKG1Q13976 671 aa6.67□□□□□ -1.34
CTNNA1-220ENST00000520260 KIF22Q14807 665 aa6.67□□□□□ -1.34
CTNNA1-220ENST00000520260 CERKLQ49MI3 558 aaPredicted RBP6.67□□□□□ -1.34
CTNNA1-220ENST00000520260 SBK1Q52WX2 424 aa6.67□□□□□ -1.34
CTNNA1-220ENST00000520260 ZMYM1Q5SVZ6 1142 aa6.67□□□□□ -1.34
CTNNA1-220ENST00000520260 NBPF12Q5TAG4 269 aaPredicted RBP6.67□□□□□ -1.34
CTNNA1-220ENST00000520260 TMEM179Q6ZVK1 233 aa6.67□□□□□ -1.34
CTNNA1-220ENST00000520260 SKAP1Q86WV1 359 aa6.67□□□□□ -1.34
CTNNA1-220ENST00000520260 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.67□□□□□ -1.34
CTNNA1-220ENST00000520260 RIOK1Q9BRS2 568 aaKnown RBP6.67□□□□□ -1.34
CTNNA1-220ENST00000520260 IRX2Q9BZI1 471 aaPredicted RBP6.67□□□□□ -1.34
CTNNA1-220ENST00000520260 ANTXR1Q9H6X2 564 aa6.67□□□□□ -1.34
CTNNA1-220ENST00000520260 ARMT1Q9H993 441 aa6.67□□□□□ -1.34
CTNNA1-220ENST00000520260 UPF2Q9HAU5 1272 aaKnown RBP6.67□□□□□ -1.34
CTNNA1-220ENST00000520260 RRAGDQ9NQL2 400 aaPredicted RBP6.67□□□□□ -1.34
CTNNA1-220ENST00000520260 MKRN1Q9UHC7 482 aaKnown RBP6.67□□□□□ -1.34
CTNNA1-220ENST00000520260 PNMA2Q9UL42 364 aa6.67□□□□□ -1.34
CTNNA1-220ENST00000520260 ISY1Q9ULR0 285 aaKnown RBP6.67□□□□□ -1.34
CTNNA1-220ENST00000520260 SYNPO2Q9UMS6 1093 aa6.67□□□□□ -1.34
CTNNA1-220ENST00000520260 CCDC171Q6TFL3 1326 aa6.67□□□□□ -1.34
CTNNA1-220ENST00000520260 TCRBV5S4A2TA0A5A2 114 aa6.66□□□□□ -1.34
CTNNA1-220ENST00000520260 SPDYE5A6NIY4 337 aa6.66□□□□□ -1.34
CTNNA1-220ENST00000520260 USP17L5A8MUK1 530 aa6.66□□□□□ -1.34
CTNNA1-220ENST00000520260 ZNF213O14771 459 aa6.66□□□□□ -1.34
CTNNA1-220ENST00000520260 EPB41L2O43491 1005 aaKnown RBP6.66□□□□□ -1.34
CTNNA1-220ENST00000520260 RRP9O43818 475 aaKnown RBP6.66□□□□□ -1.34
CTNNA1-220ENST00000520260 SDSP20132 328 aa6.66□□□□□ -1.34
CTNNA1-220ENST00000520260 OSBPP22059 807 aa6.66□□□□□ -1.34
CTNNA1-220ENST00000520260 NFIAQ12857 509 aa6.66□□□□□ -1.34
CTNNA1-220ENST00000520260 VGLL4Q14135 290 aa6.66□□□□□ -1.34
CTNNA1-220ENST00000520260 KRT32Q14532 448 aa6.66□□□□□ -1.34
CTNNA1-220ENST00000520260 ABCB5Q2M3G0 1257 aa6.66□□□□□ -1.34
CTNNA1-220ENST00000520260 LDLRAD1Q5T700 205 aa6.66□□□□□ -1.34
CTNNA1-220ENST00000520260 RALYLQ86SE5 291 aaKnown RBP6.66□□□□□ -1.34
CTNNA1-220ENST00000520260 IQCA1Q86XH1 822 aa6.66□□□□□ -1.34
CTNNA1-220ENST00000520260 CCAR1Q8IX12 1150 aaKnown RBP6.66□□□□□ -1.34
CTNNA1-220ENST00000520260 ESR2Q92731 530 aa6.66□□□□□ -1.34
CTNNA1-220ENST00000520260 STRBPQ96SI9 672 aaKnown RBP6.66□□□□□ -1.34
CTNNA1-220ENST00000520260 PARK7Q99497 189 aaKnown RBP6.66□□□□□ -1.34
CTNNA1-220ENST00000520260 DSCC1Q9BVC3 393 aa6.66□□□□□ -1.34
CTNNA1-220ENST00000520260 KRT23Q9C075 422 aa6.66□□□□□ -1.34
CTNNA1-220ENST00000520260 CWC22Q9HCG8 908 aaKnown RBP6.66□□□□□ -1.34
CTNNA1-220ENST00000520260 GOPCQ9HD26 462 aa6.66□□□□□ -1.34
CTNNA1-220ENST00000520260 DCP1AQ9NPI6 582 aaPredicted RBP6.66□□□□□ -1.34
CTNNA1-220ENST00000520260 TOMM22Q9NS69 142 aa6.66□□□□□ -1.34
CTNNA1-220ENST00000520260 HCSTQ9UBK5 93 aa6.66□□□□□ -1.34
CTNNA1-220ENST00000520260 FAM198AQ9UFP1 575 aa6.66□□□□□ -1.34
CTNNA1-220ENST00000520260 PCDHB8Q9UN66 801 aa6.66□□□□□ -1.34
CTNNA1-220ENST00000520260 CTDP1Q9Y5B0 961 aaPredicted RBP6.66□□□□□ -1.34
CTNNA1-220ENST00000520260 SALL3Q9BXA9 1300 aa6.66□□□□□ -1.34
CTNNA1-220ENST00000520260 ZNF646O15015 1829 aaPredicted RBP6.66□□□□□ -1.34
CTNNA1-220ENST00000520260 AK9Q5TCS8 1911 aa6.66□□□□□ -1.34
CTNNA1-220ENST00000520260 AKAP11Q9UKA4 1901 aa6.66□□□□□ -1.34
CTNNA1-220ENST00000520260 TSPY2A6NKD2 308 aa6.65□□□□□ -1.34
CTNNA1-220ENST00000520260 MINDY4BA8MYZ0 360 aa6.65□□□□□ -1.34
CTNNA1-220ENST00000520260 UBE2Q2LH0YL09 131 aa6.65□□□□□ -1.34
CTNNA1-220ENST00000520260 USP2O75604 605 aaPredicted RBP6.65□□□□□ -1.34
CTNNA1-220ENST00000520260 TSPY3P0CV98 308 aa6.65□□□□□ -1.34
CTNNA1-220ENST00000520260 TSPY8P0CW00 308 aa6.65□□□□□ -1.34
CTNNA1-220ENST00000520260 CAP2P40123 477 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms