RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 PPM1JQ5JR12 505 aa7.69□□□□□ -1.18
HMGB1P46-201ENST00000520062 MRM1Q6IN84 353 aaKnown RBP7.69□□□□□ -1.18
HMGB1P46-201ENST00000520062 HID1Q8IV36 788 aa7.69□□□□□ -1.18
HMGB1P46-201ENST00000520062 SMG8Q8ND04 991 aaKnown RBP7.69□□□□□ -1.18
HMGB1P46-201ENST00000520062 RUSC1Q9BVN2 902 aa7.69□□□□□ -1.18
HMGB1P46-201ENST00000520062 RNF208Q9H0X6 261 aa7.69□□□□□ -1.18
HMGB1P46-201ENST00000520062 CYP4F12Q9HCS2 524 aa7.69□□□□□ -1.18
HMGB1P46-201ENST00000520062 FANCLQ9NW38 375 aa7.69□□□□□ -1.18
HMGB1P46-201ENST00000520062 TJP2Q9UDY2 1190 aa7.69□□□□□ -1.18
HMGB1P46-201ENST00000520062 PPP1R9AQ9ULJ8 1098 aa7.69□□□□□ -1.18
HMGB1P46-201ENST00000520062 PRKAB1Q9Y478 270 aa7.69□□□□□ -1.18
HMGB1P46-201ENST00000520062 CSADQ9Y600 493 aa7.69□□□□□ -1.18
HMGB1P46-201ENST00000520062 SPDYE3A6NKU9 549 aa7.68□□□□□ -1.18
HMGB1P46-201ENST00000520062 CHURC1-FNTBB4DL54 471 aa7.68□□□□□ -1.18
HMGB1P46-201ENST00000520062 CDK11BP21127 795 aaKnown RBP7.68□□□□□ -1.18
HMGB1P46-201ENST00000520062 CAP2P40123 477 aa7.68□□□□□ -1.18
HMGB1P46-201ENST00000520062 TAF7LQ5H9L4 462 aa7.68□□□□□ -1.18
HMGB1P46-201ENST00000520062 AKAP4Q5JQC9 854 aa7.68□□□□□ -1.18
HMGB1P46-201ENST00000520062 NUTM2GQ5VZR2 741 aa7.68□□□□□ -1.18
HMGB1P46-201ENST00000520062 SYNPOQ8N3V7 929 aa7.68□□□□□ -1.18
HMGB1P46-201ENST00000520062 FAM13CQ8NE31 585 aa7.68□□□□□ -1.18
HMGB1P46-201ENST00000520062 TMEM87BQ96K49 555 aa7.68□□□□□ -1.18
HMGB1P46-201ENST00000520062 DHRS1Q96LJ7 313 aa7.68□□□□□ -1.18
HMGB1P46-201ENST00000520062 FANCD2OSQ96PS1 177 aa7.68□□□□□ -1.18
HMGB1P46-201ENST00000520062 SLKQ9H2G2 1235 aaPredicted RBP7.68□□□□□ -1.18
HMGB1P46-201ENST00000520062 KANSL2Q9H9L4 492 aa7.68□□□□□ -1.18
HMGB1P46-201ENST00000520062 DISC1Q9NRI5 854 aa7.68□□□□□ -1.18
HMGB1P46-201ENST00000520062 ENAMQ9NRM1 1142 aa7.68□□□□□ -1.18
HMGB1P46-201ENST00000520062 ZMYM5Q9UJ78 669 aa7.68□□□□□ -1.18
HMGB1P46-201ENST00000520062 ZNF214Q9UL59 606 aaPredicted RBP7.68□□□□□ -1.18
HMGB1P46-201ENST00000520062 ESYT3A0FGR9 886 aa7.67□□□□□ -1.18
HMGB1P46-201ENST00000520062 PIK3R2O00459 728 aa7.67□□□□□ -1.18
HMGB1P46-201ENST00000520062 RGS13O14921 159 aa7.67□□□□□ -1.18
HMGB1P46-201ENST00000520062 ADH5P11766 374 aa7.67□□□□□ -1.18
HMGB1P46-201ENST00000520062 ZNF143P52747 638 aaPredicted RBP7.67□□□□□ -1.18
HMGB1P46-201ENST00000520062 SLC7A5Q01650 507 aa7.67□□□□□ -1.18
HMGB1P46-201ENST00000520062 SSRP1Q08945 709 aaKnown RBP7.67□□□□□ -1.18
HMGB1P46-201ENST00000520062 LONRF2Q1L5Z9 754 aa7.67□□□□□ -1.18
HMGB1P46-201ENST00000520062 C16orf86Q6ZW13 317 aa7.67□□□□□ -1.18
HMGB1P46-201ENST00000520062 KIAA0907Q7Z7F0 614 aaPredicted RBP7.67□□□□□ -1.18
HMGB1P46-201ENST00000520062 MRPL18Q9H0U6 180 aaKnown RBP7.67□□□□□ -1.18
HMGB1P46-201ENST00000520062 GSX1Q9H4S2 264 aaPredicted RBP7.67□□□□□ -1.18
HMGB1P46-201ENST00000520062 KDM2BQ8NHM5 1336 aa7.67□□□□□ -1.18
HMGB1P46-201ENST00000520062 WISP1O95388 367 aa7.66□□□□□ -1.18
HMGB1P46-201ENST00000520062 SQSTM1Q13501 440 aa7.66□□□□□ -1.18
HMGB1P46-201ENST00000520062 PTPROQ16827 1216 aa7.66□□□□□ -1.18
HMGB1P46-201ENST00000520062 ZC3H12BQ5HYM0 836 aaKnown RBP7.66□□□□□ -1.18
HMGB1P46-201ENST00000520062 IGF2-ASQ6U949 168 aa7.66□□□□□ -1.18
HMGB1P46-201ENST00000520062 KIAA1211Q6ZU35 1233 aa7.66□□□□□ -1.18
HMGB1P46-201ENST00000520062 SPATC1Q76KD6 591 aa7.66□□□□□ -1.18
HMGB1P46-201ENST00000520062 ZCRB1Q8TBF4 217 aaKnown RBP7.66□□□□□ -1.18
HMGB1P46-201ENST00000520062 KLHL6Q8WZ60 621 aa7.66□□□□□ -1.18
HMGB1P46-201ENST00000520062 FEZ1Q99689 392 aa7.66□□□□□ -1.18
HMGB1P46-201ENST00000520062 AP4E1Q9UPM8 1137 aa7.66□□□□□ -1.18
HMGB1P46-201ENST00000520062 IQCA1LA6NCM1 817 aa7.65□□□□□ -1.18
HMGB1P46-201ENST00000520062 SUSD5O60279 629 aa7.65□□□□□ -1.18
HMGB1P46-201ENST00000520062 DIAPH1O60610 1272 aaKnown RBP7.65□□□□□ -1.18
HMGB1P46-201ENST00000520062 TIAF1O95411 115 aa7.65□□□□□ -1.18
HMGB1P46-201ENST00000520062 NAT2P11245 290 aa7.65□□□□□ -1.18
HMGB1P46-201ENST00000520062 ELNP15502 786 aa7.65□□□□□ -1.18
HMGB1P46-201ENST00000520062 PMS1P54277 932 aaKnown RBP7.65□□□□□ -1.18
HMGB1P46-201ENST00000520062 SOX4Q06945 474 aaPredicted RBP7.65□□□□□ -1.18
HMGB1P46-201ENST00000520062 KIAA1211LQ6NV74 962 aa7.65□□□□□ -1.18
HMGB1P46-201ENST00000520062 ACAD11Q709F0 780 aa7.65□□□□□ -1.18
HMGB1P46-201ENST00000520062 CDC37L1Q7L3B6 337 aa7.65□□□□□ -1.18
HMGB1P46-201ENST00000520062 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.65□□□□□ -1.18
HMGB1P46-201ENST00000520062 PHACTR4Q8IZ21 702 aa7.65□□□□□ -1.18
HMGB1P46-201ENST00000520062 ZSWIM2Q8NEG5 633 aa7.65□□□□□ -1.18
HMGB1P46-201ENST00000520062 NEDD1Q8NHV4 660 aa7.65□□□□□ -1.18
HMGB1P46-201ENST00000520062 TRIM11Q96F44 468 aa7.65□□□□□ -1.18
HMGB1P46-201ENST00000520062 CCDC74BQ96LY2 380 aa7.65□□□□□ -1.18
HMGB1P46-201ENST00000520062 RRAGCQ9HB90 399 aa7.65□□□□□ -1.18
HMGB1P46-201ENST00000520062 PFDN2Q9UHV9 154 aa7.65□□□□□ -1.18
HMGB1P46-201ENST00000520062 NEFMP07197 916 aa7.64□□□□□ -1.19
HMGB1P46-201ENST00000520062 GMPRP36959 345 aa7.64□□□□□ -1.19
HMGB1P46-201ENST00000520062 TTLL4Q14679 1199 aa7.64□□□□□ -1.19
HMGB1P46-201ENST00000520062 SLC10A6Q3KNW5 377 aa7.64□□□□□ -1.19
HMGB1P46-201ENST00000520062 GNPTABQ3T906 1256 aa7.64□□□□□ -1.19
HMGB1P46-201ENST00000520062 ANKRD34AQ69YU3 496 aa7.64□□□□□ -1.19
HMGB1P46-201ENST00000520062 LINC00114Q6XXX2 140 aa7.64□□□□□ -1.19
HMGB1P46-201ENST00000520062 LRRC47Q8N1G4 583 aaKnown RBP7.64□□□□□ -1.19
HMGB1P46-201ENST00000520062 CYB5D2Q8WUJ1 264 aa7.64□□□□□ -1.19
HMGB1P46-201ENST00000520062 SMARCC1Q92922 1105 aaPredicted RBP7.64□□□□□ -1.19
HMGB1P46-201ENST00000520062 SGSM3Q96HU1 749 aa7.64□□□□□ -1.19
HMGB1P46-201ENST00000520062 SPATA9Q9BWV2 254 aa7.64□□□□□ -1.19
HMGB1P46-201ENST00000520062 FBRSQ9HAH7 460 aa7.64□□□□□ -1.19
HMGB1P46-201ENST00000520062 SUCOQ9UBS9 1254 aaKnown RBP7.64□□□□□ -1.19
HMGB1P46-201ENST00000520062 LEMD3Q9Y2U8 911 aa7.64□□□□□ -1.19
HMGB1P46-201ENST00000520062 PTCH2Q9Y6C5 1203 aa7.64□□□□□ -1.19
HMGB1P46-201ENST00000520062 GNB5O14775 395 aa7.63□□□□□ -1.19
HMGB1P46-201ENST00000520062 PPP1R12AO14974 1030 aaPredicted RBP7.63□□□□□ -1.19
HMGB1P46-201ENST00000520062 DNAJC6O75061 913 aa7.63□□□□□ -1.19
HMGB1P46-201ENST00000520062 CST3P01034 146 aaPredicted RBP7.63□□□□□ -1.19
HMGB1P46-201ENST00000520062 IBSPP21815 317 aaPredicted RBP7.63□□□□□ -1.19
HMGB1P46-201ENST00000520062 POLR2BP30876 1174 aaKnown RBP7.63□□□□□ -1.19
HMGB1P46-201ENST00000520062 TRIM28Q13263 835 aaKnown RBP7.63□□□□□ -1.19
HMGB1P46-201ENST00000520062 SLBPQ14493 270 aaKnown RBP eCLIP7.63□□□□□ -1.19
HMGB1P46-201ENST00000520062 TCEA2Q15560 299 aa7.63□□□□□ -1.19
HMGB1P46-201ENST00000520062 TMEM130Q8N3G9 435 aa7.63□□□□□ -1.19
HMGB1P46-201ENST00000520062 WHAMMQ8TF30 809 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 469.4 ms