RNA–Protein interactions for RNA: ENST00000519894.1

FBXO28-204, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-204ENST00000519894 ECHDC1Q9NTX5 307 aa18.09■□□□□ 0.49
FBXO28-204ENST00000519894 SLC45A1Q9Y2W3 748 aa18.09■□□□□ 0.49
FBXO28-204ENST00000519894 ZSWIM8A7E2V4 1837 aa18.09■□□□□ 0.49
FBXO28-204ENST00000519894 GDF11O95390 407 aa18.08■□□□□ 0.48
FBXO28-204ENST00000519894 CHGBP05060 677 aa18.08■□□□□ 0.48
FBXO28-204ENST00000519894 CTGFP29279 349 aa18.08■□□□□ 0.48
FBXO28-204ENST00000519894 ARHGEF6Q15052 776 aa18.08■□□□□ 0.48
FBXO28-204ENST00000519894 LCORLQ8N3X6 602 aa18.08■□□□□ 0.48
FBXO28-204ENST00000519894 ASNSP08243 561 aa18.07■□□□□ 0.48
FBXO28-204ENST00000519894 BCRP11274 1271 aa18.07■□□□□ 0.48
FBXO28-204ENST00000519894 PLCD1P51178 756 aa18.07■□□□□ 0.48
FBXO28-204ENST00000519894 KIF22Q14807 665 aa18.07■□□□□ 0.48
FBXO28-204ENST00000519894 SH3D19Q5HYK7 790 aa18.07■□□□□ 0.48
FBXO28-204ENST00000519894 TREML2Q5T2D2 321 aa18.07■□□□□ 0.48
FBXO28-204ENST00000519894 TATDN1Q6P1N9 297 aa18.07■□□□□ 0.48
FBXO28-204ENST00000519894 TTC6Q86TZ1 520 aa18.07■□□□□ 0.48
FBXO28-204ENST00000519894 PROCA1Q8NCQ7 364 aaPredicted RBP18.07■□□□□ 0.48
FBXO28-204ENST00000519894 WDR18Q9BV38 432 aa18.07■□□□□ 0.48
FBXO28-204ENST00000519894 CRNKL1Q9BZJ0 848 aaKnown RBP18.07■□□□□ 0.48
FBXO28-204ENST00000519894 EHD4Q9H223 541 aa18.07■□□□□ 0.48
FBXO28-204ENST00000519894 AS3MTQ9HBK9 375 aa18.07■□□□□ 0.48
FBXO28-204ENST00000519894 GINM1Q9NU53 330 aa18.07■□□□□ 0.48
FBXO28-204ENST00000519894 AGTPBP1Q9UPW5 1226 aa18.07■□□□□ 0.48
FBXO28-204ENST00000519894 ECM2O94769 699 aaPredicted RBP18.06■□□□□ 0.48
FBXO28-204ENST00000519894 HMGCS2P54868 508 aa18.06■□□□□ 0.48
FBXO28-204ENST00000519894 UBE3CQ15386 1083 aa18.06■□□□□ 0.48
FBXO28-204ENST00000519894 TSHZ3Q63HK5 1081 aa18.06■□□□□ 0.48
FBXO28-204ENST00000519894 SDR42E1Q8WUS8 393 aa18.06■□□□□ 0.48
FBXO28-204ENST00000519894 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.06■□□□□ 0.48
FBXO28-204ENST00000519894 ARMT1Q9H993 441 aa18.06■□□□□ 0.48
FBXO28-204ENST00000519894 SERPINB13Q9UIV8 391 aa18.06■□□□□ 0.48
FBXO28-204ENST00000519894 ZBTB21Q9ULJ3 1066 aa18.06■□□□□ 0.48
FBXO28-204ENST00000519894 DDX60LQ5H9U9 1706 aaKnown RBP18.06■□□□□ 0.48
FBXO28-204ENST00000519894 POLR3DP05423 398 aaPredicted RBP18.05■□□□□ 0.48
FBXO28-204ENST00000519894 MLLT1Q03111 559 aaPredicted RBP18.05■□□□□ 0.48
FBXO28-204ENST00000519894 DCP1AQ9NPI6 582 aaPredicted RBP18.05■□□□□ 0.48
FBXO28-204ENST00000519894 PTCH2Q9Y6C5 1203 aa18.05■□□□□ 0.48
FBXO28-204ENST00000519894 NAV1Q8NEY1 1877 aa18.05■□□□□ 0.48
FBXO28-204ENST00000519894 LOC285556D6RIA3 1793 aa18.04■□□□□ 0.48
FBXO28-204ENST00000519894 MYH7P12883 1935 aa18.04■□□□□ 0.48
FBXO28-204ENST00000519894 PRKAB2O43741 272 aa18.04■□□□□ 0.48
FBXO28-204ENST00000519894 MBD4O95243 580 aa18.04■□□□□ 0.48
FBXO28-204ENST00000519894 CD44P16070 742 aaKnown RBP18.04■□□□□ 0.48
FBXO28-204ENST00000519894 PSMC4P43686 418 aa18.04■□□□□ 0.48
FBXO28-204ENST00000519894 BACE1P56817 501 aa18.04■□□□□ 0.48
FBXO28-204ENST00000519894 GABPAQ06546 454 aa18.04■□□□□ 0.48
FBXO28-204ENST00000519894 MCM9Q9NXL9 1143 aa18.04■□□□□ 0.48
FBXO28-204ENST00000519894 GNRH1P01148 92 aa18.03■□□□□ 0.48
FBXO28-204ENST00000519894 GH2P01242 217 aa18.03■□□□□ 0.48
FBXO28-204ENST00000519894 SHMT1P34896 483 aa18.03■□□□□ 0.48
FBXO28-204ENST00000519894 MTMR2Q13614 643 aa18.03■□□□□ 0.48
FBXO28-204ENST00000519894 ZSCAN25Q6NSZ9 544 aa18.03■□□□□ 0.48
FBXO28-204ENST00000519894 OTUD7AQ8TE49 926 aaPredicted RBP18.03■□□□□ 0.48
FBXO28-204ENST00000519894 ARMC5Q96C12 935 aa18.03■□□□□ 0.48
FBXO28-204ENST00000519894 GPATCH3Q96I76 525 aa18.03■□□□□ 0.48
FBXO28-204ENST00000519894 TRIM47Q96LD4 638 aa18.03■□□□□ 0.48
FBXO28-204ENST00000519894 PUS7LQ9H0K6 701 aaKnown RBP18.03■□□□□ 0.48
FBXO28-204ENST00000519894 C19orf81C9J6K1 198 aa18.02■□□□□ 0.48
FBXO28-204ENST00000519894 CYP2D6P10635 497 aa18.02■□□□□ 0.48
FBXO28-204ENST00000519894 CERKLQ49MI3 558 aaPredicted RBP18.02■□□□□ 0.48
FBXO28-204ENST00000519894 KBTBD3Q8NAB2 608 aa18.02■□□□□ 0.48
FBXO28-204ENST00000519894 ATP8A2Q9NTI2 1148 aa18.02■□□□□ 0.48
FBXO28-204ENST00000519894 PNMA3Q9UL41 463 aa18.02■□□□□ 0.48
FBXO28-204ENST00000519894 TTC41PQ6P2S7 1318 aa18.01■□□□□ 0.47
FBXO28-204ENST00000519894 USP17L10C9JJH3 530 aa18.01■□□□□ 0.47
FBXO28-204ENST00000519894 FMNL1O95466 1100 aaPredicted RBP18.01■□□□□ 0.47
FBXO28-204ENST00000519894 OSBPP22059 807 aa18.01■□□□□ 0.47
FBXO28-204ENST00000519894 PRMT2P55345 433 aa18.01■□□□□ 0.47
FBXO28-204ENST00000519894 PI4K2BQ8TCG2 481 aa18.01■□□□□ 0.47
FBXO28-204ENST00000519894 SMCR8Q8TEV9 937 aaPredicted RBP18.01■□□□□ 0.47
FBXO28-204ENST00000519894 SRRDQ9UH36 339 aa18.01■□□□□ 0.47
FBXO28-204ENST00000519894 HOXD10P28358 340 aa18■□□□□ 0.47
FBXO28-204ENST00000519894 GUCY1A2P33402 732 aa18■□□□□ 0.47
FBXO28-204ENST00000519894 PABPC4Q13310 644 aaKnown RBP eCLIP18■□□□□ 0.47
FBXO28-204ENST00000519894 HDAC1Q13547 482 aaPredicted RBP18■□□□□ 0.47
FBXO28-204ENST00000519894 ABCB5Q2M3G0 1257 aa18■□□□□ 0.47
FBXO28-204ENST00000519894 ANKRD13CQ8N6S4 541 aa18■□□□□ 0.47
FBXO28-204ENST00000519894 ASCC2Q9H1I8 757 aaPredicted RBP18■□□□□ 0.47
FBXO28-204ENST00000519894 EMILIN3Q9NT22 766 aa18■□□□□ 0.47
FBXO28-204ENST00000519894 TMOD4Q9NZQ9 345 aa18■□□□□ 0.47
FBXO28-204ENST00000519894 MGAMO43451 1857 aa18■□□□□ 0.47
FBXO28-204ENST00000519894 SMIM22K7EJ46 135 aa17.99■□□□□ 0.47
FBXO28-204ENST00000519894 HOXA7P31268 230 aaPredicted RBP17.99■□□□□ 0.47
FBXO28-204ENST00000519894 FCGRTP55899 365 aa17.99■□□□□ 0.47
FBXO28-204ENST00000519894 RAB3GAP1Q15042 981 aa17.99■□□□□ 0.47
FBXO28-204ENST00000519894 SLC9C1Q4G0N8 1177 aa17.99■□□□□ 0.47
FBXO28-204ENST00000519894 ANKRD45Q5TZF3 282 aa17.99■□□□□ 0.47
FBXO28-204ENST00000519894 GCC1Q96CN9 775 aa17.99■□□□□ 0.47
FBXO28-204ENST00000519894 DYNLL2Q96FJ2 89 aa17.99■□□□□ 0.47
FBXO28-204ENST00000519894 ZNF333Q96JL9 665 aa17.99■□□□□ 0.47
FBXO28-204ENST00000519894 CABP5Q9NP86 173 aa17.99■□□□□ 0.47
FBXO28-204ENST00000519894 SLC4A4Q9Y6R1 1079 aa17.99■□□□□ 0.47
FBXO28-204ENST00000519894 BAZ2AQ9UIF9 1905 aaKnown RBP17.99■□□□□ 0.47
FBXO28-204ENST00000519894 SALL3Q9BXA9 1300 aa17.98■□□□□ 0.47
FBXO28-204ENST00000519894 POTEFA5A3E0 1075 aa17.98■□□□□ 0.47
FBXO28-204ENST00000519894 ERC2O15083 957 aa17.98■□□□□ 0.47
FBXO28-204ENST00000519894 RNF113AO15541 343 aaKnown RBP17.98■□□□□ 0.47
FBXO28-204ENST00000519894 C12orf60Q5U649 245 aa17.98■□□□□ 0.47
FBXO28-204ENST00000519894 USP17L2Q6R6M4 530 aa17.98■□□□□ 0.47
FBXO28-204ENST00000519894 NBPF11Q86T75 865 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms