RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 MTMR2Q13614 643 aa30.72■■■□□ 2.51
VEGFA-220ENST00000519767 NKX2-3Q8TAU0 364 aa30.72■■■□□ 2.51
VEGFA-220ENST00000519767 COA7Q96BR5 231 aa30.72■■■□□ 2.51
VEGFA-220ENST00000519767 RIOK1Q9BRS2 568 aaKnown RBP30.72■■■□□ 2.51
VEGFA-220ENST00000519767 ZBTB21Q9ULJ3 1066 aa30.72■■■□□ 2.51
VEGFA-220ENST00000519767 RBBP6Q7Z6E9 1792 aaKnown RBP30.71■■■□□ 2.51
VEGFA-220ENST00000519767 PDE6AP16499 860 aa30.71■■■□□ 2.51
VEGFA-220ENST00000519767 HOXA7P31268 230 aaPredicted RBP30.71■■■□□ 2.51
VEGFA-220ENST00000519767 TATDN1Q6P1N9 297 aa30.71■■■□□ 2.51
VEGFA-220ENST00000519767 GABRQQ9UN88 632 aa30.71■■■□□ 2.51
VEGFA-220ENST00000519767 MKI67P46013 3256 aaKnown RBP30.71■■■□□ 2.51
VEGFA-220ENST00000519767 GOLIM4O00461 696 aa30.7■■■□□ 2.51
VEGFA-220ENST00000519767 GDF11O95390 407 aa30.7■■■□□ 2.51
VEGFA-220ENST00000519767 FLT3LGP49771 235 aa30.7■■■□□ 2.51
VEGFA-220ENST00000519767 IRF5Q13568 498 aa30.7■■■□□ 2.51
VEGFA-220ENST00000519767 PXYLP1Q8TE99 480 aa30.7■■■□□ 2.51
VEGFA-220ENST00000519767 DNAJC2Q99543 621 aaKnown RBP30.7■■■□□ 2.51
VEGFA-220ENST00000519767 CRNKL1Q9BZJ0 848 aaKnown RBP30.7■■■□□ 2.51
VEGFA-220ENST00000519767 PTPRFP10586 1907 aa30.7■■■□□ 2.51
VEGFA-220ENST00000519767 ZSWIM8A7E2V4 1837 aa30.69■■■□□ 2.5
VEGFA-220ENST00000519767 ATP5JP18859 108 aa30.69■■■□□ 2.5
VEGFA-220ENST00000519767 MTFR1Q15390 333 aa30.69■■■□□ 2.5
VEGFA-220ENST00000519767 MYO5AQ9Y4I1 1855 aaKnown RBP30.69■■■□□ 2.5
VEGFA-220ENST00000519767 ADCY3O60266 1144 aa30.68■■■□□ 2.5
VEGFA-220ENST00000519767 IRX3P78415 501 aaPredicted RBP30.68■■■□□ 2.5
VEGFA-220ENST00000519767 C20orf194Q5TEA3 1177 aa30.68■■■□□ 2.5
VEGFA-220ENST00000519767 BCL11AQ9H165 835 aa30.68■■■□□ 2.5
VEGFA-220ENST00000519767 GJB1P08034 283 aa30.67■■■□□ 2.5
VEGFA-220ENST00000519767 CCL5P13501 91 aa30.67■■■□□ 2.5
VEGFA-220ENST00000519767 ZNF532Q9HCE3 1301 aa30.67■■■□□ 2.5
VEGFA-220ENST00000519767 SLC34A2O95436 690 aa30.66■■■□□ 2.5
VEGFA-220ENST00000519767 GH2P01242 217 aa30.66■■■□□ 2.5
VEGFA-220ENST00000519767 POLR3DP05423 398 aaPredicted RBP30.66■■■□□ 2.5
VEGFA-220ENST00000519767 CERKLQ49MI3 558 aaPredicted RBP30.66■■■□□ 2.5
VEGFA-220ENST00000519767 USP17L2Q6R6M4 530 aa30.66■■■□□ 2.5
VEGFA-220ENST00000519767 LRRCC1Q9C099 1032 aa30.66■■■□□ 2.5
VEGFA-220ENST00000519767 RNF208Q9H0X6 261 aa30.66■■■□□ 2.5
VEGFA-220ENST00000519767 PAG1Q9NWQ8 432 aa30.66■■■□□ 2.5
VEGFA-220ENST00000519767 CAPN2P17655 700 aa30.65■■■□□ 2.5
VEGFA-220ENST00000519767 GCC1Q96CN9 775 aa30.65■■■□□ 2.5
VEGFA-220ENST00000519767 P2RX7Q99572 595 aaKnown RBP30.65■■■□□ 2.5
VEGFA-220ENST00000519767 DDX24Q9GZR7 859 aaKnown RBP eCLIP30.65■■■□□ 2.51e-12■■■□□ 17.3
VEGFA-220ENST00000519767 CABP5Q9NP86 173 aa30.65■■■□□ 2.5
VEGFA-220ENST00000519767 MORF4L1Q9UBU8 362 aa30.65■■■□□ 2.5
VEGFA-220ENST00000519767 FOCADQ5VW36 1801 aa30.65■■■□□ 2.5
VEGFA-220ENST00000519767 BRCA2P51587 3418 aa30.64■■■□□ 2.5
VEGFA-220ENST00000519767 TCRBV5S4A2TA0A5A2 114 aa30.64■■■□□ 2.5
VEGFA-220ENST00000519767 SHROOM1Q2M3G4 852 aaPredicted RBP30.64■■■□□ 2.5
VEGFA-220ENST00000519767 BOLA2Q9H3K6 86 aa30.64■■■□□ 2.5
VEGFA-220ENST00000519767 TAOK2Q9UL54 1235 aa30.64■■■□□ 2.5
VEGFA-220ENST00000519767 SIPA1L1O43166 1804 aa30.63■■■□□ 2.49
VEGFA-220ENST00000519767 GJA8P48165 433 aa30.63■■■□□ 2.49
VEGFA-220ENST00000519767 PLCD1P51178 756 aa30.63■■■□□ 2.49
VEGFA-220ENST00000519767 ABCB5Q2M3G0 1257 aa30.63■■■□□ 2.49
VEGFA-220ENST00000519767 GTF3C2Q8WUA4 911 aaPredicted RBP30.63■■■□□ 2.49
VEGFA-220ENST00000519767 HAUS7Q99871 368 aa30.63■■■□□ 2.49
VEGFA-220ENST00000519767 ATAD5Q96QE3 1844 aa30.63■■■□□ 2.49
VEGFA-220ENST00000519767 CDK5RAP2Q96SN8 1893 aa30.63■■■□□ 2.49
VEGFA-220ENST00000519767 GPRC5AQ8NFJ5 357 aa30.62■■■□□ 2.49
VEGFA-220ENST00000519767 EMILIN3Q9NT22 766 aa30.62■■■□□ 2.49
VEGFA-220ENST00000519767 MCM9Q9NXL9 1143 aa30.62■■■□□ 2.49
VEGFA-220ENST00000519767 LOC285556D6RIA3 1793 aa30.61■■■□□ 2.49
VEGFA-220ENST00000519767 USP14P54578 494 aa30.61■■■□□ 2.49
VEGFA-220ENST00000519767 HERVK_113P62684 666 aa30.61■■■□□ 2.49
VEGFA-220ENST00000519767 ELNP15502 786 aa30.6■■■□□ 2.49
VEGFA-220ENST00000519767 SHMT1P34896 483 aa30.6■■■□□ 2.49
VEGFA-220ENST00000519767 RAB3GAP1Q15042 981 aa30.6■■■□□ 2.49
VEGFA-220ENST00000519767 EDC3Q96F86 508 aaKnown RBP30.6■■■□□ 2.49
VEGFA-220ENST00000519767 C12orf42Q96LP6 360 aa30.6■■■□□ 2.49
VEGFA-220ENST00000519767 INHAP05111 366 aa30.59■■■□□ 2.49
VEGFA-220ENST00000519767 ADD2P35612 726 aa30.59■■■□□ 2.49
VEGFA-220ENST00000519767 GABPAQ06546 454 aa30.59■■■□□ 2.49
VEGFA-220ENST00000519767 FEZ1Q99689 392 aa30.59■■■□□ 2.49
VEGFA-220ENST00000519767 KIAA1683Q9H0B3 1180 aa30.59■■■□□ 2.49
VEGFA-220ENST00000519767 DCP1AQ9NPI6 582 aaPredicted RBP30.59■■■□□ 2.49
VEGFA-220ENST00000519767 MGAMO43451 1857 aa30.59■■■□□ 2.49
VEGFA-220ENST00000519767 ZSCAN25Q6NSZ9 544 aa30.58■■■□□ 2.49
VEGFA-220ENST00000519767 SHISA4Q96DD7 197 aa30.58■■■□□ 2.49
VEGFA-220ENST00000519767 UNC93B1Q9H1C4 597 aa30.58■■■□□ 2.49
VEGFA-220ENST00000519767 DCTPP1Q9H773 170 aa30.58■■■□□ 2.49
VEGFA-220ENST00000519767 ATP8A2Q9NTI2 1148 aa30.58■■■□□ 2.49
VEGFA-220ENST00000519767 GJD2Q9UKL4 321 aa30.58■■■□□ 2.49
VEGFA-220ENST00000519767 MYH1P12882 1939 aa30.57■■■□□ 2.48
VEGFA-220ENST00000519767 USP17L15C9J2P7 530 aa30.57■■■□□ 2.48
VEGFA-220ENST00000519767 USP17L13C9JLJ4 530 aa30.57■■■□□ 2.48
VEGFA-220ENST00000519767 USP17L11C9JVI0 530 aa30.57■■■□□ 2.48
VEGFA-220ENST00000519767 USP17L18D6R9N7 530 aa30.57■■■□□ 2.48
VEGFA-220ENST00000519767 USP17L22D6RA61 530 aa30.57■■■□□ 2.48
VEGFA-220ENST00000519767 USP17L17D6RBQ6 530 aa30.57■■■□□ 2.48
VEGFA-220ENST00000519767 USP17L19D6RCP7 530 aa30.57■■■□□ 2.48
VEGFA-220ENST00000519767 USP17L20D6RJB6 530 aa30.57■■■□□ 2.48
VEGFA-220ENST00000519767 USP17L24Q0WX57 530 aa30.57■■■□□ 2.48
VEGFA-220ENST00000519767 UBE3CQ15386 1083 aa30.57■■■□□ 2.48
VEGFA-220ENST00000519767 LCORLQ8N3X6 602 aa30.57■■■□□ 2.48
VEGFA-220ENST00000519767 RBPJLQ9UBG7 517 aa30.57■■■□□ 2.48
VEGFA-220ENST00000519767 SGPL1O95470 568 aa30.56■■■□□ 2.48
VEGFA-220ENST00000519767 U2AF1L4Q8WU68 220 aaKnown RBP30.56■■■□□ 2.48
VEGFA-220ENST00000519767 SDR42E1Q8WUS8 393 aa30.56■■■□□ 2.48
VEGFA-220ENST00000519767 ARMT1Q9H993 441 aa30.56■■■□□ 2.48
VEGFA-220ENST00000519767 MAPK4P31152 587 aa30.55■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms