RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 CRACR2BQ8N4Y2 399 aaPredicted RBP13.82□□□□□ -0.2
SPIDR-212ENST00000519661 PROCA1Q8NCQ7 364 aaPredicted RBP13.82□□□□□ -0.2
SPIDR-212ENST00000519661 ZNF280CQ8ND82 737 aa13.82□□□□□ -0.2
SPIDR-212ENST00000519661 DDRGK1Q96HY6 314 aa13.82□□□□□ -0.2
SPIDR-212ENST00000519661 CCDC17Q96LX7 622 aa13.82□□□□□ -0.2
SPIDR-212ENST00000519661 SEC62Q99442 399 aaKnown RBP13.82□□□□□ -0.2
SPIDR-212ENST00000519661 SAP30BPQ9UHR5 308 aaKnown RBP13.82□□□□□ -0.2
SPIDR-212ENST00000519661 ANAPC4Q9UJX5 808 aa13.82□□□□□ -0.2
SPIDR-212ENST00000519661 ZHX2Q9Y6X8 837 aa13.82□□□□□ -0.2
SPIDR-212ENST00000519661 ADGRA2Q96PE1 1338 aa13.82□□□□□ -0.2
SPIDR-212ENST00000519661 PTPRFP10586 1907 aa13.82□□□□□ -0.2
SPIDR-212ENST00000519661 LOC285556D6RIA3 1793 aa13.81□□□□□ -0.2
SPIDR-212ENST00000519661 CCL15-CCL14A0A0B4J2E2 113 aa13.81□□□□□ -0.2
SPIDR-212ENST00000519661 A0A0D9SFI3 127 aa13.81□□□□□ -0.2
SPIDR-212ENST00000519661 POLR3DP05423 398 aaPredicted RBP13.81□□□□□ -0.2
SPIDR-212ENST00000519661 SDSP20132 328 aa13.81□□□□□ -0.2
SPIDR-212ENST00000519661 NT5C2P49902 561 aa13.81□□□□□ -0.2
SPIDR-212ENST00000519661 CCL15Q16663 113 aa13.81□□□□□ -0.2
SPIDR-212ENST00000519661 MCMDC2Q4G0Z9 681 aa13.81□□□□□ -0.2
SPIDR-212ENST00000519661 GPAT2Q6NUI2 795 aa13.81□□□□□ -0.2
SPIDR-212ENST00000519661 FASTKD5Q7L8L6 764 aaKnown RBP13.81□□□□□ -0.2
SPIDR-212ENST00000519661 IFNL3Q8IZI9 196 aa13.81□□□□□ -0.2
SPIDR-212ENST00000519661 C12orf42Q96LP6 360 aa13.81□□□□□ -0.2
SPIDR-212ENST00000519661 BCL11AQ9H165 835 aa13.81□□□□□ -0.2
SPIDR-212ENST00000519661 PLIN4Q96Q06 1357 aa13.81□□□□□ -0.2
SPIDR-212ENST00000519661 AK9Q5TCS8 1911 aa13.8□□□□□ -0.2
SPIDR-212ENST00000519661 GREB1LQ9C091 1923 aaPredicted RBP13.8□□□□□ -0.2
SPIDR-212ENST00000519661 BTBD19C9JJ37 291 aa13.8□□□□□ -0.2
SPIDR-212ENST00000519661 GUCY1A2P33402 732 aa13.8□□□□□ -0.2
SPIDR-212ENST00000519661 EVX2Q03828 476 aa13.8□□□□□ -0.2
SPIDR-212ENST00000519661 AMOTL1Q8IY63 956 aa13.8□□□□□ -0.2
SPIDR-212ENST00000519661 FAM43AQ8N2R8 423 aa13.8□□□□□ -0.2
SPIDR-212ENST00000519661 FAM227BQ96M60 508 aa13.8□□□□□ -0.2
SPIDR-212ENST00000519661 NACAP1Q9BZK3 213 aa13.8□□□□□ -0.2
SPIDR-212ENST00000519661 AS3MTQ9HBK9 375 aa13.8□□□□□ -0.2
SPIDR-212ENST00000519661 SYNPO2Q9UMS6 1093 aa13.8□□□□□ -0.2
SPIDR-212ENST00000519661 RAD50Q92878 1312 aa13.8□□□□□ -0.2
SPIDR-212ENST00000519661 C19orf81C9J6K1 198 aa13.79□□□□□ -0.2
SPIDR-212ENST00000519661 TRPA1O75762 1119 aa13.79□□□□□ -0.2
SPIDR-212ENST00000519661 CYP2D6P10635 497 aa13.79□□□□□ -0.2
SPIDR-212ENST00000519661 CDK8P49336 464 aa13.79□□□□□ -0.2
SPIDR-212ENST00000519661 MFAP1P55081 439 aaKnown RBP13.79□□□□□ -0.2
SPIDR-212ENST00000519661 BACE1P56817 501 aa13.79□□□□□ -0.2
SPIDR-212ENST00000519661 NMIQ13287 307 aaPredicted RBP13.79□□□□□ -0.2
SPIDR-212ENST00000519661 CERKLQ49MI3 558 aaPredicted RBP13.79□□□□□ -0.2
SPIDR-212ENST00000519661 BMP2KLQ5H9B9 411 aa13.79□□□□□ -0.2
SPIDR-212ENST00000519661 TMEM179Q6ZVK1 233 aa13.79□□□□□ -0.2
SPIDR-212ENST00000519661 KIAA1683Q9H0B3 1180 aa13.79□□□□□ -0.2
SPIDR-212ENST00000519661 CCDC171Q6TFL3 1326 aa13.79□□□□□ -0.2
SPIDR-212ENST00000519661 ATAD5Q96QE3 1844 aa13.78□□□□□ -0.2
SPIDR-212ENST00000519661 TLR2O60603 784 aa13.78□□□□□ -0.2
SPIDR-212ENST00000519661 GH2P01242 217 aa13.78□□□□□ -0.2
SPIDR-212ENST00000519661 PCP11498 1178 aaKnown RBP13.78□□□□□ -0.2
SPIDR-212ENST00000519661 HOXA7P31268 230 aaPredicted RBP13.78□□□□□ -0.2
SPIDR-212ENST00000519661 LBX1P52954 281 aa13.78□□□□□ -0.2
SPIDR-212ENST00000519661 MKRN3Q13064 507 aaKnown RBP13.78□□□□□ -0.2
SPIDR-212ENST00000519661 ABCB5Q2M3G0 1257 aa13.78□□□□□ -0.2
SPIDR-212ENST00000519661 ZNF589Q86UQ0 364 aaPredicted RBP13.78□□□□□ -0.2
SPIDR-212ENST00000519661 TRIM34Q9BYJ4 488 aa13.78□□□□□ -0.2
SPIDR-212ENST00000519661 AGTPBP1Q9UPW5 1226 aa13.78□□□□□ -0.2
SPIDR-212ENST00000519661 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.78□□□□□ -0.2
SPIDR-212ENST00000519661 IGKV6D-41A0A0C4DH26 115 aa13.77□□□□□ -0.21
SPIDR-212ENST00000519661 TRIM6-TRIM34B2RNG4 842 aa13.77□□□□□ -0.21
SPIDR-212ENST00000519661 SMIM22K7EJ46 135 aa13.77□□□□□ -0.21
SPIDR-212ENST00000519661 GPR25O00155 361 aa13.77□□□□□ -0.21
SPIDR-212ENST00000519661 NEFLP07196 543 aa13.77□□□□□ -0.21
SPIDR-212ENST00000519661 HSPD1P10809 573 aaKnown RBP13.77□□□□□ -0.21
SPIDR-212ENST00000519661 RASA1P20936 1047 aa13.77□□□□□ -0.21
SPIDR-212ENST00000519661 NOVP48745 357 aa13.77□□□□□ -0.21
SPIDR-212ENST00000519661 SPP2Q13103 211 aa13.77□□□□□ -0.21
SPIDR-212ENST00000519661 CRHR2Q13324 411 aa13.77□□□□□ -0.21
SPIDR-212ENST00000519661 SIAH1Q8IUQ4 282 aa13.77□□□□□ -0.21
SPIDR-212ENST00000519661 DSCC1Q9BVC3 393 aa13.77□□□□□ -0.21
SPIDR-212ENST00000519661 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.77□□□□□ -0.21
SPIDR-212ENST00000519661 R3HDMLQ9H3Y0 253 aa13.77□□□□□ -0.21
SPIDR-212ENST00000519661 ZNF287Q9HBT7 754 aa13.77□□□□□ -0.21
SPIDR-212ENST00000519661 BAZ2AQ9UIF9 1905 aaKnown RBP13.77□□□□□ -0.21
SPIDR-212ENST00000519661 CYP2D7A0A087X1C5 515 aa13.76□□□□□ -0.21
SPIDR-212ENST00000519661 USP17L10C9JJH3 530 aa13.76□□□□□ -0.21
SPIDR-212ENST00000519661 ORC4O43929 436 aa13.76□□□□□ -0.21
SPIDR-212ENST00000519661 SHROOM1Q2M3G4 852 aaPredicted RBP13.76□□□□□ -0.21
SPIDR-212ENST00000519661 VPS53Q5VIR6 699 aa13.76□□□□□ -0.21
SPIDR-212ENST00000519661 C17orf99Q6UX52 265 aa13.76□□□□□ -0.21
SPIDR-212ENST00000519661 SLC44A5Q8NCS7 719 aa13.76□□□□□ -0.21
SPIDR-212ENST00000519661 DYNLL2Q96FJ2 89 aa13.76□□□□□ -0.21
SPIDR-212ENST00000519661 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.76□□□□□ -0.21
SPIDR-212ENST00000519661 TRIM75PA6NK02 468 aa13.75□□□□□ -0.21
SPIDR-212ENST00000519661 PDHXO00330 501 aa13.75□□□□□ -0.21
SPIDR-212ENST00000519661 GDF11O95390 407 aa13.75□□□□□ -0.21
SPIDR-212ENST00000519661 FGAP02671 866 aa13.75□□□□□ -0.21
SPIDR-212ENST00000519661 BCRP11274 1271 aa13.75□□□□□ -0.21
SPIDR-212ENST00000519661 CHMLP26374 656 aa13.75□□□□□ -0.21
SPIDR-212ENST00000519661 TDO2P48775 406 aa13.75□□□□□ -0.21
SPIDR-212ENST00000519661 USP14P54578 494 aa13.75□□□□□ -0.21
SPIDR-212ENST00000519661 PPARAQ07869 468 aa13.75□□□□□ -0.21
SPIDR-212ENST00000519661 LBX2Q6XYB7 198 aa13.75□□□□□ -0.21
SPIDR-212ENST00000519661 CCDC129Q6ZRS4 1044 aa13.75□□□□□ -0.21
SPIDR-212ENST00000519661 RILPL2Q969X0 211 aa13.75□□□□□ -0.21
SPIDR-212ENST00000519661 CCDC136Q96JN2 1154 aa13.75□□□□□ -0.21
SPIDR-212ENST00000519661 PARK7Q99497 189 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms