RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 GDF11O95390 407 aa15.15■□□□□ 0.02
CSMD1-205ENST00000519623 HLA-DOAP06340 250 aa15.15■□□□□ 0.02
CSMD1-205ENST00000519623 HOXA7P31268 230 aaPredicted RBP15.15■□□□□ 0.02
CSMD1-205ENST00000519623 GJA8P48165 433 aa15.15■□□□□ 0.02
CSMD1-205ENST00000519623 PABPC4Q13310 644 aaKnown RBP eCLIP15.15■□□□□ 0.02
CSMD1-205ENST00000519623 MTMR2Q13614 643 aa15.15■□□□□ 0.02
CSMD1-205ENST00000519623 CERS3Q8IU89 383 aa15.15■□□□□ 0.02
CSMD1-205ENST00000519623 PXYLP1Q8TE99 480 aa15.15■□□□□ 0.02
CSMD1-205ENST00000519623 RIOK1Q9BRS2 568 aaKnown RBP15.15■□□□□ 0.02
CSMD1-205ENST00000519623 RNF208Q9H0X6 261 aa15.15■□□□□ 0.02
CSMD1-205ENST00000519623 C19orf81C9J6K1 198 aa15.14■□□□□ 0.01
CSMD1-205ENST00000519623 USP17L10C9JJH3 530 aa15.14■□□□□ 0.01
CSMD1-205ENST00000519623 APBB1O00213 710 aa15.14■□□□□ 0.01
CSMD1-205ENST00000519623 ELNP15502 786 aa15.14■□□□□ 0.01
CSMD1-205ENST00000519623 UBXN2AP68543 259 aa15.14■□□□□ 0.01
CSMD1-205ENST00000519623 TATDN1Q6P1N9 297 aa15.14■□□□□ 0.01
CSMD1-205ENST00000519623 UBE2Q1Q7Z7E8 422 aa15.14■□□□□ 0.01
CSMD1-205ENST00000519623 CLASRPQ8N2M8 674 aaKnown RBP15.14■□□□□ 0.01
CSMD1-205ENST00000519623 NKX2-3Q8TAU0 364 aa15.14■□□□□ 0.01
CSMD1-205ENST00000519623 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.14■□□□□ 0.01
CSMD1-205ENST00000519623 COA7Q96BR5 231 aa15.14■□□□□ 0.01
CSMD1-205ENST00000519623 KIF1BPQ96EK5 621 aa15.14■□□□□ 0.01
CSMD1-205ENST00000519623 P2RX7Q99572 595 aaKnown RBP15.14■□□□□ 0.01
CSMD1-205ENST00000519623 TRIM34Q9BYJ4 488 aa15.14■□□□□ 0.01
CSMD1-205ENST00000519623 UNC93B1Q9H1C4 597 aa15.14■□□□□ 0.01
CSMD1-205ENST00000519623 RCAN3Q9UKA8 241 aa15.14■□□□□ 0.01
CSMD1-205ENST00000519623 ZBTB21Q9ULJ3 1066 aa15.14■□□□□ 0.01
CSMD1-205ENST00000519623 HMMRO75330 724 aa15.13■□□□□ 0.01
CSMD1-205ENST00000519623 USP5P45974 858 aa15.13■□□□□ 0.01
CSMD1-205ENST00000519623 TTF1Q15361 905 aaPredicted RBP15.13■□□□□ 0.01
CSMD1-205ENST00000519623 GCC1Q96CN9 775 aa15.13■□□□□ 0.01
CSMD1-205ENST00000519623 EMILIN3Q9NT22 766 aa15.13■□□□□ 0.01
CSMD1-205ENST00000519623 TMOD4Q9NZQ9 345 aa15.13■□□□□ 0.01
CSMD1-205ENST00000519623 MORF4L1Q9UBU8 362 aa15.13■□□□□ 0.01
CSMD1-205ENST00000519623 GJD2Q9UKL4 321 aa15.13■□□□□ 0.01
CSMD1-205ENST00000519623 RAB11FIP3O75154 756 aa15.12■□□□□ 0.01
CSMD1-205ENST00000519623 GH2P01242 217 aa15.12■□□□□ 0.01
CSMD1-205ENST00000519623 INHAP05111 366 aa15.12■□□□□ 0.01
CSMD1-205ENST00000519623 PDE6AP16499 860 aa15.12■□□□□ 0.01
CSMD1-205ENST00000519623 PLCD1P51178 756 aa15.12■□□□□ 0.01
CSMD1-205ENST00000519623 SLC9C2Q5TAH2 1124 aa15.12■□□□□ 0.01
CSMD1-205ENST00000519623 TTC6Q86TZ1 520 aa15.12■□□□□ 0.01
CSMD1-205ENST00000519623 EHD4Q9H223 541 aa15.12■□□□□ 0.01
CSMD1-205ENST00000519623 SERPINB13Q9UIV8 391 aa15.12■□□□□ 0.01
CSMD1-205ENST00000519623 MAGEB6P1A0A0J9YX57 407 aa15.11■□□□□ 0.01
CSMD1-205ENST00000519623 TCRBV5S4A2TA0A5A2 114 aa15.11■□□□□ 0.01
CSMD1-205ENST00000519623 PEX10O60683 326 aa15.11■□□□□ 0.01
CSMD1-205ENST00000519623 SGPL1O95470 568 aa15.11■□□□□ 0.01
CSMD1-205ENST00000519623 IFIT2P09913 472 aaKnown RBP15.11■□□□□ 0.01
CSMD1-205ENST00000519623 HABP4Q5JVS0 413 aaKnown RBP15.11■□□□□ 0.01
CSMD1-205ENST00000519623 C20orf194Q5TEA3 1177 aa15.11■□□□□ 0.01
CSMD1-205ENST00000519623 POTEEQ6S8J3 1075 aa15.11■□□□□ 0.01
CSMD1-205ENST00000519623 U2AF1L4Q8WU68 220 aaKnown RBP15.11■□□□□ 0.01
CSMD1-205ENST00000519623 TXNRD2Q9NNW7 524 aa15.11■□□□□ 0.01
CSMD1-205ENST00000519623 RBPJLQ9UBG7 517 aa15.11■□□□□ 0.01
CSMD1-205ENST00000519623 GOLIM4O00461 696 aa15.1■□□□□ 0.01
CSMD1-205ENST00000519623 SHMT1P34896 483 aa15.1■□□□□ 0.01
CSMD1-205ENST00000519623 HERVK_113P62684 666 aa15.1■□□□□ 0.01
CSMD1-205ENST00000519623 IRX3P78415 501 aaPredicted RBP15.1■□□□□ 0.01
CSMD1-205ENST00000519623 Q3C1V9 767 aa15.1■□□□□ 0.01
CSMD1-205ENST00000519623 CERKLQ49MI3 558 aaPredicted RBP15.1■□□□□ 0.01
CSMD1-205ENST00000519623 USP17L2Q6R6M4 530 aa15.1■□□□□ 0.01
CSMD1-205ENST00000519623 EDC3Q96F86 508 aaKnown RBP15.1■□□□□ 0.01
CSMD1-205ENST00000519623 CHMP4BQ9H444 224 aaKnown RBP15.1■□□□□ 0.01
CSMD1-205ENST00000519623 ZNF532Q9HCE3 1301 aa15.1■□□□□ 0.01
CSMD1-205ENST00000519623 PLXNB2O15031 1838 aa15.09■□□□□ 0.01
CSMD1-205ENST00000519623 H0YGN5 161 aa15.09■□□□□ 0.01
CSMD1-205ENST00000519623 GABPAQ06546 454 aa15.09■□□□□ 0.01
CSMD1-205ENST00000519623 PDE3AQ14432 1141 aa15.09■□□□□ 0.01
CSMD1-205ENST00000519623 GPRC5AQ8NFJ5 357 aa15.09■□□□□ 0.01
CSMD1-205ENST00000519623 C12orf42Q96LP6 360 aa15.09■□□□□ 0.01
CSMD1-205ENST00000519623 DNAJC2Q99543 621 aaKnown RBP15.09■□□□□ 0.01
CSMD1-205ENST00000519623 BCL11AQ9H165 835 aa15.09■□□□□ 0.01
CSMD1-205ENST00000519623 PAK6Q9NQU5 681 aaPredicted RBP15.09■□□□□ 0.01
CSMD1-205ENST00000519623 TAOK2Q9UL54 1235 aa15.09■□□□□ 0.01
CSMD1-205ENST00000519623 POLR3DP05423 398 aaPredicted RBP15.08■□□□□ 0
CSMD1-205ENST00000519623 ATP5JP18859 108 aa15.08■□□□□ 0
CSMD1-205ENST00000519623 GUCY1A2P33402 732 aa15.08■□□□□ 0
CSMD1-205ENST00000519623 EVX2Q03828 476 aa15.08■□□□□ 0
CSMD1-205ENST00000519623 ABCB5Q2M3G0 1257 aa15.08■□□□□ 0
CSMD1-205ENST00000519623 ACER1Q8TDN7 264 aa15.08■□□□□ 0
CSMD1-205ENST00000519623 DEFB118Q96PH6 123 aa15.08■□□□□ 0
CSMD1-205ENST00000519623 CRNKL1Q9BZJ0 848 aaKnown RBP15.08■□□□□ 0
CSMD1-205ENST00000519623 CRISPLD2Q9H0B8 497 aa15.08■□□□□ 0
CSMD1-205ENST00000519623 BOLA2Q9H3K6 86 aa15.08■□□□□ 0
CSMD1-205ENST00000519623 TFRCP02786 760 aaKnown RBP15.07■□□□□ 0
CSMD1-205ENST00000519623 CAPN2P17655 700 aa15.07■□□□□ 0
CSMD1-205ENST00000519623 RAB3GAP1Q15042 981 aa15.07■□□□□ 0
CSMD1-205ENST00000519623 SLFNL1Q499Z3 407 aa15.07■□□□□ 0
CSMD1-205ENST00000519623 LCORLQ8N3X6 602 aa15.07■□□□□ 0
CSMD1-205ENST00000519623 SDR42E1Q8WUS8 393 aa15.07■□□□□ 0
CSMD1-205ENST00000519623 DPF3Q92784 378 aa15.07■□□□□ 0
CSMD1-205ENST00000519623 KIAA1683Q9H0B3 1180 aa15.07■□□□□ 0
CSMD1-205ENST00000519623 DCP1AQ9NPI6 582 aaPredicted RBP15.07■□□□□ 0
CSMD1-205ENST00000519623 PAG1Q9NWQ8 432 aa15.07■□□□□ 0
CSMD1-205ENST00000519623 MCM9Q9NXL9 1143 aa15.07■□□□□ 0
CSMD1-205ENST00000519623 COLQQ9Y215 455 aaPredicted RBP15.07■□□□□ 0
CSMD1-205ENST00000519623 DDX60LQ5H9U9 1706 aaKnown RBP15.06■□□□□ 0
CSMD1-205ENST00000519623 USP17L15C9J2P7 530 aa15.06■□□□□ 0
CSMD1-205ENST00000519623 USP17L13C9JLJ4 530 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms