RNA–Protein interactions for RNA: ENST00000519535.1

SCUBE2-205, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 3

Gene SCUBE2, Length 738 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-205ENST00000519535 MTMR2Q13614 643 aa16.4■□□□□ 0.22
SCUBE2-205ENST00000519535 PKN2Q16513 984 aaKnown RBP16.4■□□□□ 0.22
SCUBE2-205ENST00000519535 CRACR2BQ8N4Y2 399 aaPredicted RBP16.4■□□□□ 0.22
SCUBE2-205ENST00000519535 ACER1Q8TDN7 264 aa16.4■□□□□ 0.22
SCUBE2-205ENST00000519535 OSBP2Q969R2 916 aa16.4■□□□□ 0.22
SCUBE2-205ENST00000519535 WDR18Q9BV38 432 aa16.4■□□□□ 0.22
SCUBE2-205ENST00000519535 UBE3CQ15386 1083 aa16.39■□□□□ 0.21
SCUBE2-205ENST00000519535 SH3D19Q5HYK7 790 aa16.39■□□□□ 0.21
SCUBE2-205ENST00000519535 CLEC10AQ8IUN9 316 aa16.39■□□□□ 0.21
SCUBE2-205ENST00000519535 EHD4Q9H223 541 aa16.39■□□□□ 0.21
SCUBE2-205ENST00000519535 EMILIN3Q9NT22 766 aa16.39■□□□□ 0.21
SCUBE2-205ENST00000519535 MCM9Q9NXL9 1143 aa16.39■□□□□ 0.21
SCUBE2-205ENST00000519535 SERPINB13Q9UIV8 391 aa16.39■□□□□ 0.21
SCUBE2-205ENST00000519535 AGTPBP1Q9UPW5 1226 aa16.39■□□□□ 0.21
SCUBE2-205ENST00000519535 POTEFA5A3E0 1075 aa16.38■□□□□ 0.21
SCUBE2-205ENST00000519535 M0R2C6 588 aa16.38■□□□□ 0.21
SCUBE2-205ENST00000519535 HLA-DOAP06340 250 aa16.38■□□□□ 0.21
SCUBE2-205ENST00000519535 HDAC1Q13547 482 aaPredicted RBP16.38■□□□□ 0.21
SCUBE2-205ENST00000519535 FASTKD5Q7L8L6 764 aaKnown RBP16.38■□□□□ 0.21
SCUBE2-205ENST00000519535 KBTBD3Q8NAB2 608 aa16.38■□□□□ 0.21
SCUBE2-205ENST00000519535 SEC62Q99442 399 aaKnown RBP16.38■□□□□ 0.21
SCUBE2-205ENST00000519535 PARK7Q99497 189 aaKnown RBP16.38■□□□□ 0.21
SCUBE2-205ENST00000519535 CRNKL1Q9BZJ0 848 aaKnown RBP16.38■□□□□ 0.21
SCUBE2-205ENST00000519535 SUPT16HQ9Y5B9 1047 aaKnown RBP16.38■□□□□ 0.21
SCUBE2-205ENST00000519535 PTPRFP10586 1907 aa16.38■□□□□ 0.21
SCUBE2-205ENST00000519535 ASNSP08243 561 aa16.37■□□□□ 0.21
SCUBE2-205ENST00000519535 PSMC4P43686 418 aa16.37■□□□□ 0.21
SCUBE2-205ENST00000519535 BACE1P56817 501 aa16.37■□□□□ 0.21
SCUBE2-205ENST00000519535 KIAA1755Q5JYT7 1200 aa16.37■□□□□ 0.21
SCUBE2-205ENST00000519535 ANKRD45Q5TZF3 282 aa16.37■□□□□ 0.21
SCUBE2-205ENST00000519535 TMED8Q6PL24 325 aaPredicted RBP16.37■□□□□ 0.21
SCUBE2-205ENST00000519535 SIAH1Q8IUQ4 282 aa16.37■□□□□ 0.21
SCUBE2-205ENST00000519535 STRBPQ96SI9 672 aaKnown RBP16.37■□□□□ 0.21
SCUBE2-205ENST00000519535 A0A1W2PRG0 241 aa16.36■□□□□ 0.21
SCUBE2-205ENST00000519535 POLR3DP05423 398 aaPredicted RBP16.36■□□□□ 0.21
SCUBE2-205ENST00000519535 OSBPP22059 807 aa16.36■□□□□ 0.21
SCUBE2-205ENST00000519535 IRX6P78412 446 aaPredicted RBP16.36■□□□□ 0.21
SCUBE2-205ENST00000519535 SEPT2Q15019 361 aa16.36■□□□□ 0.21
SCUBE2-205ENST00000519535 SH3TC2Q8TF17 1288 aa16.36■□□□□ 0.21
SCUBE2-205ENST00000519535 ARMC5Q96C12 935 aa16.36■□□□□ 0.21
SCUBE2-205ENST00000519535 ASCC2Q9H1I8 757 aaPredicted RBP16.36■□□□□ 0.21
SCUBE2-205ENST00000519535 EPB41L4AQ9HCS5 686 aaPredicted RBP16.36■□□□□ 0.21
SCUBE2-205ENST00000519535 GABRQQ9UN88 632 aa16.36■□□□□ 0.21
SCUBE2-205ENST00000519535 SLC45A1Q9Y2W3 748 aa16.36■□□□□ 0.21
SCUBE2-205ENST00000519535 GSG1L2A8MUP6 293 aa16.35■□□□□ 0.21
SCUBE2-205ENST00000519535 USP17L12C9JPN9 530 aa16.35■□□□□ 0.21
SCUBE2-205ENST00000519535 USP17L21D6R901 530 aa16.35■□□□□ 0.21
SCUBE2-205ENST00000519535 FOXP2O15409 715 aa16.35■□□□□ 0.21
SCUBE2-205ENST00000519535 RNF113AO15541 343 aaKnown RBP16.35■□□□□ 0.21
SCUBE2-205ENST00000519535 MYCP01106 439 aaPredicted RBP16.35■□□□□ 0.21
SCUBE2-205ENST00000519535 AKR1B1P15121 316 aa16.35■□□□□ 0.21
SCUBE2-205ENST00000519535 PRKCZQ05513 592 aa16.35■□□□□ 0.21
SCUBE2-205ENST00000519535 C12orf60Q5U649 245 aa16.35■□□□□ 0.21
SCUBE2-205ENST00000519535 TTC6Q86TZ1 520 aa16.35■□□□□ 0.21
SCUBE2-205ENST00000519535 CERS3Q8IU89 383 aa16.35■□□□□ 0.21
SCUBE2-205ENST00000519535 ANKRD13CQ8N6S4 541 aa16.35■□□□□ 0.21
SCUBE2-205ENST00000519535 PROCA1Q8NCQ7 364 aaPredicted RBP16.35■□□□□ 0.21
SCUBE2-205ENST00000519535 P2RX7Q99572 595 aaKnown RBP16.35■□□□□ 0.21
SCUBE2-205ENST00000519535 TXNRD2Q9NNW7 524 aa16.35■□□□□ 0.21
SCUBE2-205ENST00000519535 SLC4A4Q9Y6R1 1079 aa16.35■□□□□ 0.21
SCUBE2-205ENST00000519535 ATAD5Q96QE3 1844 aa16.35■□□□□ 0.21
SCUBE2-205ENST00000519535 LOC285556D6RIA3 1793 aa16.34■□□□□ 0.21
SCUBE2-205ENST00000519535 MX1P20591 662 aa16.34■□□□□ 0.21
SCUBE2-205ENST00000519535 RAB3GAP1Q15042 981 aa16.34■□□□□ 0.21
SCUBE2-205ENST00000519535 ZYXQ15942 572 aaKnown RBP16.34■□□□□ 0.21
SCUBE2-205ENST00000519535 ABCB5Q2M3G0 1257 aa16.34■□□□□ 0.21
SCUBE2-205ENST00000519535 CERKLQ49MI3 558 aaPredicted RBP16.34■□□□□ 0.21
SCUBE2-205ENST00000519535 CTR9Q6PD62 1173 aa16.34■□□□□ 0.21
SCUBE2-205ENST00000519535 ZNF333Q96JL9 665 aa16.34■□□□□ 0.21
SCUBE2-205ENST00000519535 TRIM34Q9BYJ4 488 aa16.34■□□□□ 0.21
SCUBE2-205ENST00000519535 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.34■□□□□ 0.21
SCUBE2-205ENST00000519535 SRRDQ9UH36 339 aa16.34■□□□□ 0.21
SCUBE2-205ENST00000519535 NAV1Q8NEY1 1877 aa16.33■□□□□ 0.21
SCUBE2-205ENST00000519535 MYH1P12882 1939 aa16.33■□□□□ 0.21
SCUBE2-205ENST00000519535 SMC5Q8IY18 1101 aa16.33■□□□□ 0.2
SCUBE2-205ENST00000519535 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.33■□□□□ 0.2
SCUBE2-205ENST00000519535 LNPKQ9C0E8 428 aa16.33■□□□□ 0.2
SCUBE2-205ENST00000519535 TTC41PQ6P2S7 1318 aa16.33■□□□□ 0.2
SCUBE2-205ENST00000519535 USP17L10C9JJH3 530 aa16.32■□□□□ 0.2
SCUBE2-205ENST00000519535 GPAA1O43292 621 aa16.32■□□□□ 0.2
SCUBE2-205ENST00000519535 FMNL1O95466 1100 aaPredicted RBP16.32■□□□□ 0.2
SCUBE2-205ENST00000519535 MTFR1Q15390 333 aa16.32■□□□□ 0.2
SCUBE2-205ENST00000519535 B4GALNT3Q6L9W6 998 aa16.32■□□□□ 0.2
SCUBE2-205ENST00000519535 CCDC129Q6ZRS4 1044 aa16.32■□□□□ 0.2
SCUBE2-205ENST00000519535 STK11IPQ8N1F8 1099 aa16.32■□□□□ 0.2
SCUBE2-205ENST00000519535 APPBP2Q92624 585 aa16.32■□□□□ 0.2
SCUBE2-205ENST00000519535 AS3MTQ9HBK9 375 aa16.32■□□□□ 0.2
SCUBE2-205ENST00000519535 ATP8A2Q9NTI2 1148 aa16.32■□□□□ 0.2
SCUBE2-205ENST00000519535 STAP2Q9UGK3 403 aa16.32■□□□□ 0.2
SCUBE2-205ENST00000519535 CNMDO75829 334 aa16.31■□□□□ 0.2
SCUBE2-205ENST00000519535 GLRX3O76003 335 aaKnown RBP16.31■□□□□ 0.2
SCUBE2-205ENST00000519535 EN2P19622 333 aaPredicted RBP16.31■□□□□ 0.2
SCUBE2-205ENST00000519535 HOXA7P31268 230 aaPredicted RBP16.31■□□□□ 0.2
SCUBE2-205ENST00000519535 CDK8P49336 464 aa16.31■□□□□ 0.2
SCUBE2-205ENST00000519535 PDE1AP54750 535 aa16.31■□□□□ 0.2
SCUBE2-205ENST00000519535 MLLT1Q03111 559 aaPredicted RBP16.31■□□□□ 0.2
SCUBE2-205ENST00000519535 Q3C1V9 767 aa16.31■□□□□ 0.2
SCUBE2-205ENST00000519535 SMCR8Q8TEV9 937 aaPredicted RBP16.31■□□□□ 0.2
SCUBE2-205ENST00000519535 TBC1D2Q9BYX2 928 aa16.31■□□□□ 0.2
SCUBE2-205ENST00000519535 GINM1Q9NU53 330 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms