RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 ARAP2Q8WZ64 1704 aa8.95□□□□□ -0.98
CTNNA1-216ENST00000519489 DPYSL4O14531 572 aa8.95□□□□□ -0.98
CTNNA1-216ENST00000519489 SKIV2LQ15477 1246 aaKnown RBP8.95□□□□□ -0.98
CTNNA1-216ENST00000519489 TREML2Q5T2D2 321 aa8.95□□□□□ -0.98
CTNNA1-216ENST00000519489 HERVK_113Q902F9 699 aa8.95□□□□□ -0.98
CTNNA1-216ENST00000519489 USP6NLQ92738 828 aa8.95□□□□□ -0.98
CTNNA1-216ENST00000519489 EPAS1Q99814 870 aa8.95□□□□□ -0.98
CTNNA1-216ENST00000519489 PLA2G2EQ9NZK7 142 aa8.95□□□□□ -0.98
CTNNA1-216ENST00000519489 MTCH2Q9Y6C9 303 aa8.95□□□□□ -0.98
CTNNA1-216ENST00000519489 FASNP49327 2511 aaKnown RBP8.95□□□□□ -0.98
CTNNA1-216ENST00000519489 GVINP1Q7Z2Y8 2422 aa8.94□□□□□ -0.98
CTNNA1-216ENST00000519489 EPOPA6NHQ4 379 aa8.94□□□□□ -0.98
CTNNA1-216ENST00000519489 CXCL11O14625 94 aa8.94□□□□□ -0.98
CTNNA1-216ENST00000519489 TLE2Q04725 743 aa8.94□□□□□ -0.98
CTNNA1-216ENST00000519489 TRIM28Q13263 835 aaKnown RBP8.94□□□□□ -0.98
CTNNA1-216ENST00000519489 FAM110CQ1W6H9 321 aa8.94□□□□□ -0.98
CTNNA1-216ENST00000519489 CCDC152Q4G0S7 254 aa8.94□□□□□ -0.98
CTNNA1-216ENST00000519489 GJC2Q5T442 439 aaPredicted RBP8.94□□□□□ -0.98
CTNNA1-216ENST00000519489 GJD3Q8N144 294 aa8.94□□□□□ -0.98
CTNNA1-216ENST00000519489 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.94□□□□□ -0.98
CTNNA1-216ENST00000519489 LEMD3Q9Y2U8 911 aa8.94□□□□□ -0.98
CTNNA1-216ENST00000519489 RPAP1Q9BWH6 1393 aaPredicted RBP8.94□□□□□ -0.98
CTNNA1-216ENST00000519489 HTATSF1O43719 755 aaKnown RBP8.93□□□□□ -0.98
CTNNA1-216ENST00000519489 SLURP2P0DP57 97 aa8.93□□□□□ -0.98
CTNNA1-216ENST00000519489 TMEM240Q5SV17 173 aa8.93□□□□□ -0.98
CTNNA1-216ENST00000519489 NOL9Q5SY16 702 aaKnown RBP8.93□□□□□ -0.98
CTNNA1-216ENST00000519489 GADL1Q6ZQY3 521 aa8.93□□□□□ -0.98
CTNNA1-216ENST00000519489 CCDC129Q6ZRS4 1044 aa8.93□□□□□ -0.98
CTNNA1-216ENST00000519489 CCDC84Q86UT8 332 aaPredicted RBP8.93□□□□□ -0.98
CTNNA1-216ENST00000519489 FAM178BQ8IXR5 827 aa8.93□□□□□ -0.98
CTNNA1-216ENST00000519489 MRPL50Q8N5N7 158 aaKnown RBP8.93□□□□□ -0.98
CTNNA1-216ENST00000519489 TRPV1Q8NER1 839 aa8.93□□□□□ -0.98
CTNNA1-216ENST00000519489 SMCR8Q8TEV9 937 aaPredicted RBP8.93□□□□□ -0.98
CTNNA1-216ENST00000519489 ZNF341Q9BYN7 854 aa8.93□□□□□ -0.98
CTNNA1-216ENST00000519489 FLRT1Q9NZU1 646 aa8.93□□□□□ -0.98
CTNNA1-216ENST00000519489 SLC45A1Q9Y2W3 748 aa8.93□□□□□ -0.98
CTNNA1-216ENST00000519489 DNM1LO00429 736 aa8.92□□□□□ -0.98
CTNNA1-216ENST00000519489 KIAA0355O15063 1070 aa8.92□□□□□ -0.98
CTNNA1-216ENST00000519489 IL1R1P14778 569 aa8.92□□□□□ -0.98
CTNNA1-216ENST00000519489 MYOGP15173 224 aa8.92□□□□□ -0.98
CTNNA1-216ENST00000519489 FKBP1AP62942 108 aaKnown RBP8.92□□□□□ -0.98
CTNNA1-216ENST00000519489 FPGSQ05932 587 aa8.92□□□□□ -0.98
CTNNA1-216ENST00000519489 ASCL5Q7RTU5 278 aa8.92□□□□□ -0.98
CTNNA1-216ENST00000519489 PLBD2Q8NHP8 589 aa8.92□□□□□ -0.98
CTNNA1-216ENST00000519489 GREM2Q9H772 168 aa8.92□□□□□ -0.98
CTNNA1-216ENST00000519489 RABGEF1Q9UJ41 708 aa8.92□□□□□ -0.98
CTNNA1-216ENST00000519489 SERPINA10Q9UK55 444 aa8.92□□□□□ -0.98
CTNNA1-216ENST00000519489 AFG3L2Q9Y4W6 797 aa8.92□□□□□ -0.98
CTNNA1-216ENST00000519489 WDR87Q6ZQQ6 2873 aa8.91□□□□□ -0.98
CTNNA1-216ENST00000519489 COL4A6Q14031 1691 aa8.91□□□□□ -0.98
CTNNA1-216ENST00000519489 BRWD1Q9NSI6 2320 aa8.91□□□□□ -0.98
CTNNA1-216ENST00000519489 PDE8AO60658 829 aa8.91□□□□□ -0.98
CTNNA1-216ENST00000519489 XRCC5P13010 732 aaKnown RBP8.91□□□□□ -0.98
CTNNA1-216ENST00000519489 POU3F3P20264 500 aaPredicted RBP8.91□□□□□ -0.98
CTNNA1-216ENST00000519489 CRKP46108 304 aa8.91□□□□□ -0.98
CTNNA1-216ENST00000519489 CSPP1Q1MSJ5 1256 aa8.91□□□□□ -0.98
CTNNA1-216ENST00000519489 KRT24Q2M2I5 525 aa8.91□□□□□ -0.98
CTNNA1-216ENST00000519489 THSD4Q6ZMP0 1018 aa8.91□□□□□ -0.98
CTNNA1-216ENST00000519489 TTF2Q9UNY4 1162 aaKnown RBP8.91□□□□□ -0.98
CTNNA1-216ENST00000519489 COG5Q9UP83 839 aa8.91□□□□□ -0.98
CTNNA1-216ENST00000519489 ZHX2Q9Y6X8 837 aa8.91□□□□□ -0.98
CTNNA1-216ENST00000519489 PLXNA1Q9UIW2 1896 aa8.91□□□□□ -0.98
CTNNA1-216ENST00000519489 DMXL1Q9Y485 3027 aa8.91□□□□□ -0.98
CTNNA1-216ENST00000519489 RLFQ13129 1914 aa8.9□□□□□ -0.98
CTNNA1-216ENST00000519489 SOWAHBA6NEL2 793 aa8.9□□□□□ -0.98
CTNNA1-216ENST00000519489 ZKSCAN1P17029 563 aaPredicted RBP8.9□□□□□ -0.98
CTNNA1-216ENST00000519489 ID4P47928 161 aa8.9□□□□□ -0.98
CTNNA1-216ENST00000519489 TNNI2P48788 182 aa8.9□□□□□ -0.98
CTNNA1-216ENST00000519489 FASTKD5Q7L8L6 764 aaKnown RBP8.9□□□□□ -0.98
CTNNA1-216ENST00000519489 TTLL11Q8NHH1 800 aa8.9□□□□□ -0.98
CTNNA1-216ENST00000519489 PNISRQ8TF01 805 aaKnown RBP8.9□□□□□ -0.98
CTNNA1-216ENST00000519489 LPAR1Q92633 364 aa8.9□□□□□ -0.98
CTNNA1-216ENST00000519489 HLA-CQ95604 372 aa8.9□□□□□ -0.98
CTNNA1-216ENST00000519489 FERMT2Q96AC1 680 aa8.9□□□□□ -0.98
CTNNA1-216ENST00000519489 DDX20Q9UHI6 824 aaKnown RBP8.9□□□□□ -0.98
CTNNA1-216ENST00000519489 VPS13AQ96RL7 3174 aa8.9□□□□□ -0.98
CTNNA1-216ENST00000519489 USP24Q9UPU5 2620 aa8.9□□□□□ -0.98
CTNNA1-216ENST00000519489 FAM186AA6NE01 2351 aa8.9□□□□□ -0.99
CTNNA1-216ENST00000519489 GPR179Q6PRD1 2367 aa8.9□□□□□ -0.99
CTNNA1-216ENST00000519489 GOLGA8CPA6NN73 597 aa8.89□□□□□ -0.99
CTNNA1-216ENST00000519489 PHF20L1A8MW92 1017 aa8.89□□□□□ -0.99
CTNNA1-216ENST00000519489 DCXO43602 365 aa8.89□□□□□ -0.99
CTNNA1-216ENST00000519489 ARHGEF15O94989 841 aa8.89□□□□□ -0.99
CTNNA1-216ENST00000519489 IGHA2P01877 340 aa8.89□□□□□ -0.99
CTNNA1-216ENST00000519489 ALADP13716 330 aa8.89□□□□□ -0.99
CTNNA1-216ENST00000519489 IL9P15248 144 aa8.89□□□□□ -0.99
CTNNA1-216ENST00000519489 PTPRAP18433 802 aa8.89□□□□□ -0.99
CTNNA1-216ENST00000519489 ADCYAP1R1P41586 468 aa8.89□□□□□ -0.99
CTNNA1-216ENST00000519489 RABGGTBP53611 331 aa8.89□□□□□ -0.99
CTNNA1-216ENST00000519489 PTPN5P54829 565 aa8.89□□□□□ -0.99
CTNNA1-216ENST00000519489 MORN1Q5T089 497 aa8.89□□□□□ -0.99
CTNNA1-216ENST00000519489 C1orf53Q5VUE5 145 aa8.89□□□□□ -0.99
CTNNA1-216ENST00000519489 ANO1Q5XXA6 986 aa8.89□□□□□ -0.99
CTNNA1-216ENST00000519489 TXNRD2Q9NNW7 524 aa8.89□□□□□ -0.99
CTNNA1-216ENST00000519489 CHPF2Q9P2E5 772 aa8.89□□□□□ -0.99
CTNNA1-216ENST00000519489 AGTPBP1Q9UPW5 1226 aa8.89□□□□□ -0.99
CTNNA1-216ENST00000519489 ATRNL1Q5VV63 1379 aa8.88□□□□□ -0.99
CTNNA1-216ENST00000519489 ZNF292O60281 2723 aa8.88□□□□□ -0.99
CTNNA1-216ENST00000519489 SPDYE16A6NNV3 312 aaPredicted RBP8.88□□□□□ -0.99
CTNNA1-216ENST00000519489 TAF5LO75529 589 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms