RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 SAP30BPQ9UHR5 308 aaKnown RBP13.24□□□□□ -0.29
PVT1-208ENST00000519481 EXOC6BQ9Y2D4 811 aa13.24□□□□□ -0.29
PVT1-208ENST00000519481 PHIPQ8WWQ0 1821 aa13.24□□□□□ -0.29
PVT1-208ENST00000519481 MKI67P46013 3256 aaKnown RBP13.24□□□□□ -0.29
PVT1-208ENST00000519481 MGAMO43451 1857 aa13.23□□□□□ -0.29
PVT1-208ENST00000519481 USP17L10C9JJH3 530 aa13.23□□□□□ -0.29
PVT1-208ENST00000519481 HMMRO75330 724 aa13.23□□□□□ -0.29
PVT1-208ENST00000519481 ELNP15502 786 aa13.23□□□□□ -0.29
PVT1-208ENST00000519481 DYNLL1P63167 89 aaKnown RBP13.23□□□□□ -0.29
PVT1-208ENST00000519481 TTF1Q15361 905 aaPredicted RBP13.23□□□□□ -0.29
PVT1-208ENST00000519481 MIGA1Q8NAN2 632 aa13.23□□□□□ -0.29
PVT1-208ENST00000519481 PANK1Q8TE04 598 aa13.23□□□□□ -0.29
PVT1-208ENST00000519481 U2AF1L4Q8WU68 220 aaKnown RBP13.23□□□□□ -0.29
PVT1-208ENST00000519481 SHISA4Q96DD7 197 aa13.23□□□□□ -0.29
PVT1-208ENST00000519481 UNC93B1Q9H1C4 597 aa13.23□□□□□ -0.29
PVT1-208ENST00000519481 CHMP4BQ9H444 224 aaKnown RBP13.23□□□□□ -0.29
PVT1-208ENST00000519481 FARP2O94887 1054 aaPredicted RBP13.22□□□□□ -0.29
PVT1-208ENST00000519481 GDF11O95390 407 aa13.22□□□□□ -0.29
PVT1-208ENST00000519481 SGPL1O95470 568 aa13.22□□□□□ -0.29
PVT1-208ENST00000519481 TFRCP02786 760 aaKnown RBP13.22□□□□□ -0.29
PVT1-208ENST00000519481 TTC6Q86TZ1 520 aa13.22□□□□□ -0.29
PVT1-208ENST00000519481 CCAR1Q8IX12 1150 aaKnown RBP13.22□□□□□ -0.29
PVT1-208ENST00000519481 CLASRPQ8N2M8 674 aaKnown RBP13.22□□□□□ -0.29
PVT1-208ENST00000519481 GTF3C2Q8WUA4 911 aaPredicted RBP13.22□□□□□ -0.29
PVT1-208ENST00000519481 ZBTB21Q9ULJ3 1066 aa13.22□□□□□ -0.29
PVT1-208ENST00000519481 NR2E3Q9Y5X4 410 aa13.22□□□□□ -0.29
PVT1-208ENST00000519481 CEP290O15078 2479 aa13.22□□□□□ -0.29
PVT1-208ENST00000519481 ATAD5Q96QE3 1844 aa13.22□□□□□ -0.29
PVT1-208ENST00000519481 H0YGN5 161 aa13.21□□□□□ -0.29
PVT1-208ENST00000519481 HOXA7P31268 230 aaPredicted RBP13.21□□□□□ -0.29
PVT1-208ENST00000519481 USP17L2Q6R6M4 530 aa13.21□□□□□ -0.29
PVT1-208ENST00000519481 RPAP2Q8IXW5 612 aaPredicted RBP13.21□□□□□ -0.29
PVT1-208ENST00000519481 RHPN1Q8TCX5 695 aa13.21□□□□□ -0.29
PVT1-208ENST00000519481 KIF1BPQ96EK5 621 aa13.21□□□□□ -0.29
PVT1-208ENST00000519481 DNAJC18Q9H819 358 aa13.21□□□□□ -0.29
PVT1-208ENST00000519481 IL1RAPL2Q9NP60 686 aa13.21□□□□□ -0.29
PVT1-208ENST00000519481 MORF4L1Q9UBU8 362 aa13.21□□□□□ -0.29
PVT1-208ENST00000519481 SERPINB13Q9UIV8 391 aa13.21□□□□□ -0.29
PVT1-208ENST00000519481 DDX19BQ9UMR2 479 aa13.21□□□□□ -0.29
PVT1-208ENST00000519481 LOC285556D6RIA3 1793 aa13.2□□□□□ -0.3
PVT1-208ENST00000519481 GH2P01242 217 aa13.2□□□□□ -0.3
PVT1-208ENST00000519481 HMGCRP04035 888 aa13.2□□□□□ -0.3
PVT1-208ENST00000519481 IFIT2P09913 472 aaKnown RBP13.2□□□□□ -0.3
PVT1-208ENST00000519481 HERVK_113P62684 666 aa13.2□□□□□ -0.3
PVT1-208ENST00000519481 GPRC5AQ8NFJ5 357 aa13.2□□□□□ -0.3
PVT1-208ENST00000519481 DEFB118Q96PH6 123 aa13.2□□□□□ -0.3
PVT1-208ENST00000519481 P2RX7Q99572 595 aaKnown RBP13.2□□□□□ -0.3
PVT1-208ENST00000519481 FEZ1Q99689 392 aa13.2□□□□□ -0.3
PVT1-208ENST00000519481 EHD4Q9H223 541 aa13.2□□□□□ -0.3
PVT1-208ENST00000519481 ANTXR1Q9H6X2 564 aa13.2□□□□□ -0.3
PVT1-208ENST00000519481 CWC22Q9HCG8 908 aaKnown RBP13.2□□□□□ -0.3
PVT1-208ENST00000519481 CABP5Q9NP86 173 aa13.2□□□□□ -0.3
PVT1-208ENST00000519481 MAGEB6P1A0A0J9YX57 407 aa13.19□□□□□ -0.3
PVT1-208ENST00000519481 APBB1O00213 710 aa13.19□□□□□ -0.3
PVT1-208ENST00000519481 POLR3DP05423 398 aaPredicted RBP13.19□□□□□ -0.3
PVT1-208ENST00000519481 USP14P54578 494 aa13.19□□□□□ -0.3
PVT1-208ENST00000519481 PDE3AQ14432 1141 aa13.19□□□□□ -0.3
PVT1-208ENST00000519481 CERKLQ49MI3 558 aaPredicted RBP13.19□□□□□ -0.3
PVT1-208ENST00000519481 UBE2Q1Q7Z7E8 422 aa13.19□□□□□ -0.3
PVT1-208ENST00000519481 SOCS4Q8WXH5 440 aa13.19□□□□□ -0.3
PVT1-208ENST00000519481 CRNKL1Q9BZJ0 848 aaKnown RBP13.19□□□□□ -0.3
PVT1-208ENST00000519481 BCL11AQ9H165 835 aa13.19□□□□□ -0.3
PVT1-208ENST00000519481 COLQQ9Y215 455 aaPredicted RBP13.19□□□□□ -0.3
PVT1-208ENST00000519481 NDUFB9Q9Y6M9 179 aa13.19□□□□□ -0.3
PVT1-208ENST00000519481 BRCA2P51587 3418 aa13.19□□□□□ -0.3
PVT1-208ENST00000519481 RAB11FIP3O75154 756 aa13.18□□□□□ -0.3
PVT1-208ENST00000519481 MAPK4P31152 587 aa13.18□□□□□ -0.3
PVT1-208ENST00000519481 JAG1P78504 1218 aa13.18□□□□□ -0.3
PVT1-208ENST00000519481 RAB3GAP1Q15042 981 aa13.18□□□□□ -0.3
PVT1-208ENST00000519481 ABCB5Q2M3G0 1257 aa13.18□□□□□ -0.3
PVT1-208ENST00000519481 SLC9C2Q5TAH2 1124 aa13.18□□□□□ -0.3
PVT1-208ENST00000519481 TATDN1Q6P1N9 297 aa13.18□□□□□ -0.3
PVT1-208ENST00000519481 TRMT44Q8IYL2 757 aaKnown RBP13.18□□□□□ -0.3
PVT1-208ENST00000519481 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.18□□□□□ -0.3
PVT1-208ENST00000519481 DNAJC2Q99543 621 aaKnown RBP13.18□□□□□ -0.3
PVT1-208ENST00000519481 NUDT12Q9BQG2 462 aa13.18□□□□□ -0.3
PVT1-208ENST00000519481 PAGR1Q9BTK6 254 aa13.18□□□□□ -0.3
PVT1-208ENST00000519481 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.18□□□□□ -0.35e-6■■□□□ 11.7
PVT1-208ENST00000519481 HMX1Q9NP08 348 aaPredicted RBP13.18□□□□□ -0.3
PVT1-208ENST00000519481 PAK6Q9NQU5 681 aaPredicted RBP13.18□□□□□ -0.3
PVT1-208ENST00000519481 GJD2Q9UKL4 321 aa13.18□□□□□ -0.3
PVT1-208ENST00000519481 COG6Q9Y2V7 657 aa13.18□□□□□ -0.3
PVT1-208ENST00000519481 MYO5AQ9Y4I1 1855 aaKnown RBP13.18□□□□□ -0.3
PVT1-208ENST00000519481 DOCK3Q8IZD9 2030 aa13.18□□□□□ -0.3
PVT1-208ENST00000519481 FOCADQ5VW36 1801 aa13.18□□□□□ -0.3
PVT1-208ENST00000519481 RPTORQ8N122 1335 aa13.17□□□□□ -0.3
PVT1-208ENST00000519481 USP17L15C9J2P7 530 aa13.17□□□□□ -0.3
PVT1-208ENST00000519481 USP17L13C9JLJ4 530 aa13.17□□□□□ -0.3
PVT1-208ENST00000519481 USP17L11C9JVI0 530 aa13.17□□□□□ -0.3
PVT1-208ENST00000519481 USP17L18D6R9N7 530 aa13.17□□□□□ -0.3
PVT1-208ENST00000519481 USP17L22D6RA61 530 aa13.17□□□□□ -0.3
PVT1-208ENST00000519481 USP17L17D6RBQ6 530 aa13.17□□□□□ -0.3
PVT1-208ENST00000519481 USP17L19D6RCP7 530 aa13.17□□□□□ -0.3
PVT1-208ENST00000519481 USP17L20D6RJB6 530 aa13.17□□□□□ -0.3
PVT1-208ENST00000519481 CYP2B6P20813 491 aa13.17□□□□□ -0.3
PVT1-208ENST00000519481 USP17L24Q0WX57 530 aa13.17□□□□□ -0.3
PVT1-208ENST00000519481 ZYXQ15942 572 aaKnown RBP13.17□□□□□ -0.3
PVT1-208ENST00000519481 SHROOM1Q2M3G4 852 aaPredicted RBP13.17□□□□□ -0.3
PVT1-208ENST00000519481 SIPA1L1O43166 1804 aa13.17□□□□□ -0.3
PVT1-208ENST00000519481 MYH1P12882 1939 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms