RNA–Protein interactions for RNA: ENST00000519401.5

SPIDR-211, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,090 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-211ENST00000519401 RUFY2Q8WXA3 655 aa12.87□□□□□ -0.35
SPIDR-211ENST00000519401 RPGRIP1Q96KN7 1286 aa12.87□□□□□ -0.35
SPIDR-211ENST00000519401 MEIS3Q99687 375 aa12.87□□□□□ -0.35
SPIDR-211ENST00000519401 NAA15Q9BXJ9 866 aaKnown RBP12.87□□□□□ -0.35
SPIDR-211ENST00000519401 GOLPH3LQ9H4A5 285 aa12.87□□□□□ -0.35
SPIDR-211ENST00000519401 EBF2Q9HAK2 575 aa12.87□□□□□ -0.35
SPIDR-211ENST00000519401 TPCN1Q9ULQ1 816 aa12.87□□□□□ -0.35
SPIDR-211ENST00000519401 PARP4Q9UKK3 1724 aaKnown RBP12.87□□□□□ -0.35
SPIDR-211ENST00000519401 WNK3Q9BYP7 1800 aa12.87□□□□□ -0.35
SPIDR-211ENST00000519401 FLT4P35916 1363 aa12.87□□□□□ -0.35
SPIDR-211ENST00000519401 OPA1O60313 960 aa12.86□□□□□ -0.35
SPIDR-211ENST00000519401 GGCXP38435 758 aa12.86□□□□□ -0.35
SPIDR-211ENST00000519401 PRPF40BQ6NWY9 871 aaKnown RBP12.86□□□□□ -0.35
SPIDR-211ENST00000519401 MIS18BP1Q6P0N0 1132 aa12.86□□□□□ -0.35
SPIDR-211ENST00000519401 FUKQ8N0W3 1084 aa12.86□□□□□ -0.35
SPIDR-211ENST00000519401 FMR1NBQ8N0W7 255 aaPredicted RBP12.86□□□□□ -0.35
SPIDR-211ENST00000519401 ZFAND2BQ8WV99 257 aa12.86□□□□□ -0.35
SPIDR-211ENST00000519401 P3H4Q92791 437 aa12.86□□□□□ -0.35
SPIDR-211ENST00000519401 ZBTB10Q96DT7 871 aa12.86□□□□□ -0.35
SPIDR-211ENST00000519401 U3KPZ7 1027 aaPredicted RBP12.86□□□□□ -0.35
SPIDR-211ENST00000519401 RGPD1P0DJD0 1748 aa12.86□□□□□ -0.35
SPIDR-211ENST00000519401 AGPSO00116 658 aa12.85□□□□□ -0.35
SPIDR-211ENST00000519401 ECM2O94769 699 aaPredicted RBP12.85□□□□□ -0.35
SPIDR-211ENST00000519401 ZNF202O95125 648 aa12.85□□□□□ -0.35
SPIDR-211ENST00000519401 RHOXF2BP0C7M4 288 aa12.85□□□□□ -0.35
SPIDR-211ENST00000519401 USP14P54578 494 aa12.85□□□□□ -0.35
SPIDR-211ENST00000519401 ATP2B2Q01814 1243 aa12.85□□□□□ -0.35
SPIDR-211ENST00000519401 G3BP1Q13283 466 aaKnown RBP eCLIP12.85□□□□□ -0.35
SPIDR-211ENST00000519401 KCNB1Q14721 858 aa12.85□□□□□ -0.35
SPIDR-211ENST00000519401 DPCR1Q3MIW9 517 aa12.85□□□□□ -0.35
SPIDR-211ENST00000519401 FAM228AQ86W67 206 aa12.85□□□□□ -0.35
SPIDR-211ENST00000519401 CCHCR1Q8TD31 782 aa12.85□□□□□ -0.35
SPIDR-211ENST00000519401 RHOXF2Q9BQY4 288 aa12.85□□□□□ -0.35
SPIDR-211ENST00000519401 CEMIPQ8WUJ3 1361 aa12.85□□□□□ -0.35
SPIDR-211ENST00000519401 PDLIM1O00151 329 aa12.85□□□□□ -0.35
SPIDR-211ENST00000519401 SMNDC1O75940 238 aaKnown RBP eCLIP12.85□□□□□ -0.355e-8■□□□□ 11.3
SPIDR-211ENST00000519401 FERP16591 822 aa12.85□□□□□ -0.35
SPIDR-211ENST00000519401 ZKSCAN1P17029 563 aaPredicted RBP12.85□□□□□ -0.35
SPIDR-211ENST00000519401 ADD1P35611 737 aaKnown RBP12.85□□□□□ -0.35
SPIDR-211ENST00000519401 GCLCP48506 637 aaPredicted RBP12.85□□□□□ -0.35
SPIDR-211ENST00000519401 ROR2Q01974 943 aaKnown RBP12.85□□□□□ -0.35
SPIDR-211ENST00000519401 CWF19L1Q69YN2 538 aaKnown RBP12.85□□□□□ -0.35
SPIDR-211ENST00000519401 SLC30A9Q6PML9 568 aa12.85□□□□□ -0.35
SPIDR-211ENST00000519401 CNTROBQ8N137 903 aa12.85□□□□□ -0.35
SPIDR-211ENST00000519401 TRIM58Q8NG06 486 aa12.85□□□□□ -0.35
SPIDR-211ENST00000519401 ZNF396Q96N95 335 aaPredicted RBP12.85□□□□□ -0.35
SPIDR-211ENST00000519401 LARP6Q9BRS8 491 aaKnown RBP12.85□□□□□ -0.35
SPIDR-211ENST00000519401 ZSWIM4Q9H7M6 989 aa12.85□□□□□ -0.35
SPIDR-211ENST00000519401 RGL1Q9NZL6 768 aa12.85□□□□□ -0.35
SPIDR-211ENST00000519401 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.85□□□□□ -0.35
SPIDR-211ENST00000519401 PCDHGA4Q9Y5G9 962 aa12.85□□□□□ -0.35
SPIDR-211ENST00000519401 GOLGA6BA6NDN3 693 aa12.84□□□□□ -0.35
SPIDR-211ENST00000519401 BIN1O00499 593 aa12.84□□□□□ -0.35
SPIDR-211ENST00000519401 MGRN1O60291 552 aa12.84□□□□□ -0.35
SPIDR-211ENST00000519401 FAM163BP0C2L3 166 aa12.84□□□□□ -0.35
SPIDR-211ENST00000519401 ABCD1P33897 745 aa12.84□□□□□ -0.35
SPIDR-211ENST00000519401 CCT4P50991 539 aaKnown RBP12.84□□□□□ -0.35
SPIDR-211ENST00000519401 CCDC38Q502W7 563 aa12.84□□□□□ -0.35
SPIDR-211ENST00000519401 NAA16Q6N069 864 aaPredicted RBP12.84□□□□□ -0.35
SPIDR-211ENST00000519401 C6orf89Q6UWU4 347 aa12.84□□□□□ -0.35
SPIDR-211ENST00000519401 NFXL1Q6ZNB6 911 aa12.84□□□□□ -0.35
SPIDR-211ENST00000519401 TOGARAM2Q6ZUX3 1019 aa12.84□□□□□ -0.35
SPIDR-211ENST00000519401 UBE3BQ7Z3V4 1068 aa12.84□□□□□ -0.35
SPIDR-211ENST00000519401 SPATA21Q7Z572 469 aa12.84□□□□□ -0.35
SPIDR-211ENST00000519401 NECAB1Q8N987 351 aa12.84□□□□□ -0.35
SPIDR-211ENST00000519401 MRPS27Q92552 414 aaKnown RBP12.84□□□□□ -0.35
SPIDR-211ENST00000519401 EPN3Q9H201 632 aa12.84□□□□□ -0.35
SPIDR-211ENST00000519401 HSD3B7Q9H2F3 369 aa12.84□□□□□ -0.35
SPIDR-211ENST00000519401 TPX2Q9ULW0 747 aaKnown RBP12.84□□□□□ -0.35
SPIDR-211ENST00000519401 SASH1O94885 1247 aa12.84□□□□□ -0.35
SPIDR-211ENST00000519401 GNAI2P04899 355 aa12.84□□□□□ -0.35
SPIDR-211ENST00000519401 DDB1Q16531 1140 aa12.84□□□□□ -0.35
SPIDR-211ENST00000519401 SKIDA1Q1XH10 827 aa12.84□□□□□ -0.35
SPIDR-211ENST00000519401 ALS2CR12Q96Q35 445 aa12.84□□□□□ -0.35
SPIDR-211ENST00000519401 SPAG5Q96R06 1193 aa12.84□□□□□ -0.35
SPIDR-211ENST00000519401 PANX2Q96RD6 677 aa12.84□□□□□ -0.35
SPIDR-211ENST00000519401 NAPGQ99747 312 aaPredicted RBP12.84□□□□□ -0.35
SPIDR-211ENST00000519401 SLC39A2Q9NP94 309 aa12.84□□□□□ -0.35
SPIDR-211ENST00000519401 TRPC6Q9Y210 931 aa12.84□□□□□ -0.35
SPIDR-211ENST00000519401 SAMM50Q9Y512 469 aa12.84□□□□□ -0.35
SPIDR-211ENST00000519401 FAM208AQ9UK61 1670 aaKnown RBP12.83□□□□□ -0.35
SPIDR-211ENST00000519401 SERPINC1P01008 464 aa12.83□□□□□ -0.36
SPIDR-211ENST00000519401 MYL5Q02045 173 aa12.83□□□□□ -0.36
SPIDR-211ENST00000519401 XRCC4Q13426 336 aa12.83□□□□□ -0.36
SPIDR-211ENST00000519401 CC2D2BQ6DHV5 1058 aa12.83□□□□□ -0.36
SPIDR-211ENST00000519401 BZW1Q7L1Q6 419 aaKnown RBP12.83□□□□□ -0.36
SPIDR-211ENST00000519401 USHBP1Q8N6Y0 703 aa12.83□□□□□ -0.36
SPIDR-211ENST00000519401 TC2NQ8N9U0 490 aa12.83□□□□□ -0.36
SPIDR-211ENST00000519401 FSIP1Q8NA03 581 aa12.83□□□□□ -0.36
SPIDR-211ENST00000519401 EZH1Q92800 747 aaPredicted RBP12.83□□□□□ -0.36
SPIDR-211ENST00000519401 ACSBG1Q96GR2 724 aa12.83□□□□□ -0.36
SPIDR-211ENST00000519401 SDF4Q9BRK5 362 aa12.83□□□□□ -0.36
SPIDR-211ENST00000519401 CDCA7Q9BWT1 371 aaPredicted RBP12.83□□□□□ -0.36
SPIDR-211ENST00000519401 IRX2Q9BZI1 471 aaPredicted RBP12.83□□□□□ -0.36
SPIDR-211ENST00000519401 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.83□□□□□ -0.361e-7■■■■■ 167.7
SPIDR-211ENST00000519401 CHL1O00533 1208 aa12.82□□□□□ -0.36
SPIDR-211ENST00000519401 LAMB3Q13751 1172 aa12.82□□□□□ -0.36
SPIDR-211ENST00000519401 CFAP100Q494V2 611 aa12.82□□□□□ -0.36
SPIDR-211ENST00000519401 TSHZ3Q63HK5 1081 aa12.82□□□□□ -0.36
SPIDR-211ENST00000519401 CCDC114Q96M63 670 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms